BLASTX nr result
ID: Coptis21_contig00018427
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00018427
(1682 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABA98491.1| retrotransposon protein, putative, unclassified [... 411 e-112
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta... 397 e-108
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga... 395 e-107
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga... 389 e-105
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga... 385 e-104
>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1621
Score = 411 bits (1056), Expect = e-112
Identities = 212/567 (37%), Positives = 338/567 (59%), Gaps = 7/567 (1%)
Frame = +3
Query: 3 AFATKEWLEMFPSMVVRNVVTATSDHLSLLIHLQPSVEKAAR------PFRFFEMWLKDE 164
A A EW MFP+ V N SDH ++I L+ K R FRF WL++E
Sbjct: 446 AVANPEWRAMFPAARVINGDPRHSDHRPVIIELEGK-NKGVRGRNGHNDFRFEAAWLEEE 504
Query: 165 SCKPLIDKAWNEVTHDLPDRRVVQKLRHTKQRLSVWNKRVFGNIFHNIKHTQRDLDRVLQ 344
K ++ +AW +V+ L V L LS W+ V G++ +K +++L+ +
Sbjct: 505 KFKEVVKEAW-DVSAGLQGLPVHASLAGVAAGLSSWSSNVLGDLEKRVKKVKKELETCRR 563
Query: 345 KQFNPSNHAKAKVLKAKLFEWYEKEEAFWKQKSSQHWIREGGKNTKFFHLSTVYRRRKNH 524
+ + + +VL+ +L + ++ + +WKQ++ +W+ +G +NT FFH S RRR+N
Sbjct: 564 QPISRDQVVREEVLRYRLEKLEQQVDIYWKQRAHTNWLNKGDRNTSFFHASCSERRRRNR 623
Query: 525 IDRIKDDMGCWRGGRQEVGMAIKEYFDDIYASEMPEVNEEILQLFSPCITERENEILISC 704
I++++ + G W ++ I E+F ++ S + ++++L + ++ NE L +
Sbjct: 624 INKLRREDGSWVEREEDKRAMIIEFFKQLFTSNGGQNSQKLLDVVDRKVSGAMNESLRAE 683
Query: 705 PTGEEVWRVVKKMGALKAPGPDGFQGCFYQQCWEIVGPSIIDCVQDFFNKGCMNTSFNET 884
T EEV + +G LKAPGPDG FY+ CW++VG + D V + G + +N+
Sbjct: 684 FTREEVKEALDAIGDLKAPGPDGMPAGFYKACWDVVGEKVTDEVLEVLRGGAIPEGWNDI 743
Query: 885 FIALIPKISNPDHMSKFRPISLCNFCYKIIAKILANRLKSHISKIVSPFQGAFIKGRNIG 1064
I LIPK+ P+ + RPISLCN CYK+++K+LANRLK + ++SP Q AF+ GR I
Sbjct: 744 TIVLIPKVKKPELIKDLRPISLCNVCYKLVSKVLANRLKKILPDVISPAQSAFVPGRLIS 803
Query: 1065 DNIGLASEMFHHMQHMKT-KKGFVALKMDMAKAYDRVEWSFIDNIFQRLGFSARWRQLIS 1241
DNI +A EM H+M++ ++ + G+ A K+DM+KAYDRVEWSF+ ++ +LGF W LI
Sbjct: 804 DNILIADEMTHYMRNKRSGQVGYAAFKLDMSKAYDRVEWSFLHDMILKLGFHTDWVNLIM 863
Query: 1242 QCISTVSYRVMLNGSPLDKFTPDRGLRQGDPLSPYLFILVAEALSRMIAEAENKGEIHGI 1421
+C+STV+YR+ +NG + F+P RGLRQGDPLSPYLF+L AE S ++++ E +G +HGI
Sbjct: 864 KCVSTVTYRIRVNGELSESFSPGRGLRQGDPLSPYLFLLCAEGFSALLSKTEEEGRLHGI 923
Query: 1422 KIRRNAPPISHLLYADDLILFTKANLAESGRMKLILTDYCKASGQKINYGKSSIYCSKNV 1601
+I + AP +SHLL+ADD ++ +AN E+ +++ IL Y + SGQ IN KS++ S N
Sbjct: 924 RICQGAPSVSHLLFADDSLILCRANGGEAQQLQTILQIYEECSGQVINKDKSAVMFSPNT 983
Query: 1602 HKLHSKLLKRFWKMRFFEKKDKYLGVP 1682
L + + M+ ++YLG+P
Sbjct: 984 SSLEKRAVMAALNMQRETTNERYLGLP 1010
>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1374
Score = 397 bits (1019), Expect = e-108
Identities = 211/559 (37%), Positives = 327/559 (58%), Gaps = 1/559 (0%)
Frame = +3
Query: 9 ATKEWLEMFPSMVVRNVVTATSDHLSLLIHLQPSVEKAARPFRFFEMWLKDESCKPLIDK 188
A + W+E+FP + SDH L+ +L + F++ + W++ E K L+
Sbjct: 199 ANQAWMELFPQAKATYLQKICSDHSPLINNLVGDNWRKWAGFKYDKRWVQREGFKDLLCN 258
Query: 189 AWNEVTHDLPDRRVVQKLRHTKQRLSVWNKRVFGNIFHNIKHTQRDLDRVLQKQFNPSNH 368
W++ + + +++K+ ++ +S W + + I+ Q LD ++ P +
Sbjct: 259 FWSQQSTKT-NALMMEKIASCRREISKWKRVSKPSSAVRIQELQFKLDAATKQI--PFDR 315
Query: 369 AKAKVLKAKLFEWYEKEEAFWKQKSSQHWIREGGKNTKFFHLSTVYRRRKNHIDRIKDDM 548
+ LK +L + Y EE FW++KS W+R G +NTK+FH +T RR +N I ++ D+
Sbjct: 316 RELARLKKELSQEYNNEEQFWQEKSRIMWMRNGDRNTKYFHAATKNRRAQNRIQKLIDEE 375
Query: 549 GCWRGGRQEVGMAIKEYFDDIYASEMPEVNEEILQLFSPCITERENEILISCPTGEEVWR 728
G +++G + YF ++ASE E L+ +P ++++ N L++ T EEV R
Sbjct: 376 GREWTSDEDLGRVAEAYFKKLFASEDVGYTVEELENLTPLVSDQMNNNLLAPITKEEVQR 435
Query: 729 VVKKMGALKAPGPDGFQGCFYQQCWEIVGPSIIDCVQDFFNKGCMNTSFNETFIALIPKI 908
+ K PGPDG G YQQ WE +G I + VQ FF G + N+T I LIPKI
Sbjct: 436 ATFSINPHKCPGPDGMNGFLYQQFWETMGDQITEMVQAFFRSGSIEEGMNKTNICLIPKI 495
Query: 909 SNPDHMSKFRPISLCNFCYKIIAKILANRLKSHISKIVSPFQGAFIKGRNIGDNIGLASE 1088
+ M+ FRPISLCN YK+I K++ANRLK + ++S Q AF+KGR I DNI +A E
Sbjct: 496 LKAEKMTDFRPISLCNVIYKVIGKLMANRLKKILPSLISETQAAFVKGRLISDNILIAHE 555
Query: 1089 MFHHM-QHMKTKKGFVALKMDMAKAYDRVEWSFIDNIFQRLGFSARWRQLISQCISTVSY 1265
+ H + + K + F+A+K D++KAYDRVEW F++ + LGF+ W +LI +C+ +V Y
Sbjct: 556 LLHALSSNNKCSEEFIAIKTDISKAYDRVEWPFLEKAMRGLGFADHWIRLIMECVKSVRY 615
Query: 1266 RVMLNGSPLDKFTPDRGLRQGDPLSPYLFILVAEALSRMIAEAENKGEIHGIKIRRNAPP 1445
+V++NG+P + P RGLRQGDPLSPYLF++ E L +M+ AE K +I G+K+ R APP
Sbjct: 616 QVLINGTPHGEIIPSRGLRQGDPLSPYLFVICTEMLVKMLQSAEQKNQITGLKVARGAPP 675
Query: 1446 ISHLLYADDLILFTKANLAESGRMKLILTDYCKASGQKINYGKSSIYCSKNVHKLHSKLL 1625
ISHLL+ADD + + K N G++ I+ +Y ASGQ++NY KSSIY K++ + L+
Sbjct: 676 ISHLLFADDSMFYCKVNDEALGQIIRIIEEYSLASGQRVNYLKSSIYFGKHISEERRCLV 735
Query: 1626 KRFWKMRFFEKKDKYLGVP 1682
KR + + YLG+P
Sbjct: 736 KRKLGIEREGGEGVYLGLP 754
>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1362
Score = 395 bits (1015), Expect = e-107
Identities = 208/561 (37%), Positives = 327/561 (58%), Gaps = 3/561 (0%)
Frame = +3
Query: 9 ATKEWLEMFPSMVVRNVVTATSDHLSLLIH--LQPSVEKAARPFRFFEMWLKDESCKPLI 182
A EW + FPS V ++ SDH LL+ + S + + F+F MWL E C ++
Sbjct: 201 ANDEWCDNFPSWEVVHLPRYRSDHAPLLLKTGVNDSFRRGNKLFKFEAMWLSKEECGKIV 260
Query: 183 DKAWNEVTHDLPDRRVVQKLRHTKQRLSVWNKRVFGNIFHNIKHTQRDLDRVLQKQFNPS 362
++AWN + + +L + LS W + FGN+ K L+ + Q+ + S
Sbjct: 261 EEAWNGSAGE----DITNRLDEVSRSLSTWATKTFGNLKKRKKEALTLLNGLQQRDPDAS 316
Query: 363 NHAKAKVLKAKLFEWYEKEEAFWKQKSSQHWIREGGKNTKFFHLSTVYRRRKNHIDRIKD 542
+ +++ L E + EE++W ++ + IR+G KNTK+FH R+R+N I+ + D
Sbjct: 317 TLEQCRIVSGDLDEIHRLEESYWHARARANEIRDGDKNTKYFHHKASQRKRRNTINELLD 376
Query: 543 DMGCWRGGRQEVGMAIKEYFDDIYASEMPEVNEEILQLFSPCITERENEILISCPTGEEV 722
+ G W+ GR+E+ ++ YF+ ++A++ P E L+ S C++ N L+ P+G+EV
Sbjct: 377 ENGVWKKGREEICGVVQHYFEGLFATDSPVNMELALEGLSHCVSTDMNTALLMLPSGDEV 436
Query: 723 WRVVKKMGALKAPGPDGFQGCFYQQCWEIVGPSIIDCVQDFFNKGCMNTSFNETFIALIP 902
+ M KAPG DG F+Q+ W I+G +I VQ ++ N+T I LIP
Sbjct: 437 KEALFAMHPNKAPGIDGLHALFFQKFWHILGSDVISFVQSWWRGMGDLGVVNKTCIVLIP 496
Query: 903 KISNPDHMSKFRPISLCNFCYKIIAKILANRLKSHISKIVSPFQGAFIKGRNIGDNIGLA 1082
K +P M FRPISLC YKI++K LANRLK + I+SP Q AF+ R I DN +A
Sbjct: 497 KCDHPQSMKDFRPISLCTVLYKILSKTLANRLKVILPAIISPNQSAFVPRRLITDNALVA 556
Query: 1083 SEMFHHMQHMKTKK-GFVALKMDMAKAYDRVEWSFIDNIFQRLGFSARWRQLISQCISTV 1259
E+FH M+ K G ALK+DM+KAYDRVEW F++ + +++GF W + CIS+V
Sbjct: 557 FEIFHAMKRKDANKNGVCALKLDMSKAYDRVEWCFLERVMKKMGFCDGWIDRVMACISSV 616
Query: 1260 SYRVMLNGSPLDKFTPDRGLRQGDPLSPYLFILVAEALSRMIAEAENKGEIHGIKIRRNA 1439
S+ +NG +P RGLRQGDP+SPYLF+L A+A S ++++A ++ +IHG +I R A
Sbjct: 617 SFTFNVNGVVEGSLSPSRGLRQGDPISPYLFLLCADAFSTLLSKAASEKKIHGAQICRGA 676
Query: 1440 PPISHLLYADDLILFTKANLAESGRMKLILTDYCKASGQKINYGKSSIYCSKNVHKLHSK 1619
P +SHL +ADD ILFTKA++ E + I++ Y +ASGQ++N K+ + S++V +
Sbjct: 677 PVVSHLFFADDSILFTKASVQECSMVADIISKYERASGQQVNLSKTEVVFSRSVDRERRS 736
Query: 1620 LLKRFWKMRFFEKKDKYLGVP 1682
+ ++ ++++KYLG+P
Sbjct: 737 AIVNVLGVKEVDRQEKYLGLP 757
>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1357
Score = 389 bits (1000), Expect = e-105
Identities = 211/563 (37%), Positives = 318/563 (56%), Gaps = 6/563 (1%)
Frame = +3
Query: 12 TKEWLEMFPSMVVRNVVTATSDHLSLLIHL---QPSVEKAARPFRFFEMWLKDESCKPLI 182
++ WL +FP + + V SDH ++++ + + A F F WL D++C+ ++
Sbjct: 203 SRSWLHLFPEAFIDHQVRYCSDHAAIVLRCLGNEGMPRRRAGGFWFETFWLLDDTCEEVV 262
Query: 183 DKAWNEVTHDLPDRRVVQKLRHTKQRLSVWNKRVFGNIFHNIKHTQRDLDRVLQKQFNPS 362
AWN R+ +KL + L W+K+ FG++ I+ ++ L + +
Sbjct: 263 RGAWNAAEGG----RICEKLGAVARELQGWSKKTFGSLRKKIEAVEKKLHAAQGEATSID 318
Query: 363 NHAKAKVLKAKLFEWYEKEEAFWKQKSSQHWIREGGKNTKFFHLSTVYRRRKNHIDRIKD 542
+ + L+ +L E + K EA+W +S +++G +NT +FH R+++N I I D
Sbjct: 319 SWERCVGLERELDELHAKNEAYWYLRSRVAEVKDGDRNTSYFHHKASQRKKRNLIHGIFD 378
Query: 543 DMGCWRGGRQEVGMAIKEYFDDIYASEMPEVNE--EILQLFSPCITERENEILISCPTGE 716
G W+ +E+ ++ YF +I+ S P N+ E+LQ +T+ N+IL+ + E
Sbjct: 379 GGGRWQTEGEEIECVVERYFQEIFTSSEPSSNDFQEVLQHVKRSVTQEYNDILLKPYSKE 438
Query: 717 EVWRVVKKMGALKAPGPDGFQGCFYQQCWEIVGPSIIDCVQDFFNKGCMNTSFNETFIAL 896
E++ + M KAPGPDG FYQ+ W I+G + + V + + N T IAL
Sbjct: 439 EIFAALSDMHPCKAPGPDGMHAIFYQRFWHIIGDEVFNFVSSILHNYSCPGNVNCTNIAL 498
Query: 897 IPKISNPDHMSKFRPISLCNFCYKIIAKILANRLKSHISKIVSPFQGAFIKGRNIGDNIG 1076
IPK+ +P +S+FRPISLCN YKI +K + RLK + I + Q AF+ GR I DN
Sbjct: 499 IPKVKSPTVVSEFRPISLCNVLYKIASKAIVLRLKRFLPCIATENQSAFVPGRLISDNSL 558
Query: 1077 LASEMFHHMQHMK-TKKGFVALKMDMAKAYDRVEWSFIDNIFQRLGFSARWRQLISQCIS 1253
+A E+FH M+ ++KG +A+K+DM+KAYDRVEW F+ + +GF RW L+ C++
Sbjct: 559 IALEIFHTMKKRNNSRKGLMAMKLDMSKAYDRVEWGFLRKLLLTMGFDGRWVNLVMSCVA 618
Query: 1254 TVSYRVMLNGSPLDKFTPDRGLRQGDPLSPYLFILVAEALSRMIAEAENKGEIHGIKIRR 1433
TVSY ++NG TP RGLRQGDPLSP+LFILVA+A S+M+ + EIHG K R
Sbjct: 619 TVSYSFIINGRVCGSVTPSRGLRQGDPLSPFLFILVADAFSQMVKQKVVSKEIHGAKASR 678
Query: 1434 NAPPISHLLYADDLILFTKANLAESGRMKLILTDYCKASGQKINYGKSSIYCSKNVHKLH 1613
N P ISHLL+ADD +LFT+A E + IL Y ASGQKINY KS + S+ V
Sbjct: 679 NGPEISHLLFADDSLLFTRATRQECLTIVDILNKYEAASGQKINYEKSEVSFSRGVSCEK 738
Query: 1614 SKLLKRFWKMRFFEKKDKYLGVP 1682
+ L MR ++ KYLG+P
Sbjct: 739 KEELITLLHMRQVDRHQKYLGIP 761
>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1355
Score = 385 bits (990), Expect = e-104
Identities = 209/559 (37%), Positives = 313/559 (55%), Gaps = 5/559 (0%)
Frame = +3
Query: 21 WLEMFPSMVVRNVVTATSDHLSLLIHLQPSVEKAARPFRFF--EMWLKDESCKPLIDKAW 194
W M+P+ +V + + SDHL++ + + ++ RFF WL D +C+ I AW
Sbjct: 204 WATMYPNTIVDHSMRYKSDHLAICLRSNRTRRPTSKQRRFFFETSWLLDPTCEETIRDAW 263
Query: 195 NEVTHDLPDRRVVQKLRHTKQRLSVWNKRVFGNIFHNIKHTQRDLDRVLQKQFNPSNHAK 374
+ D + +L +L W+ GNI + + DL R+ Q+ + +N
Sbjct: 264 TDSAGD----SLTGRLDLLALKLKSWSSEKGGNIGKQLGRVESDLCRLQQQPISSANCEA 319
Query: 375 AKVLKAKLFEWYEKEEAFWKQKSSQHWIREGGKNTKFFHLSTVYRRRKNHIDRIKDDMGC 554
L+ KL E + K+EA W +S +R+G +NTK+FH R+++N + + D G
Sbjct: 320 RLTLEKKLDELHAKQEARWYLRSRAMEVRDGDRNTKYFHHKASQRKKRNFVKGLFDASGT 379
Query: 555 WRGGRQEVGMAIKEYFDDIYASEMPEVNE--EILQLFSPCITERENEILISCPTGEEVWR 728
W ++ +YF I+ S P + ++L P +TE N L+ + EE++
Sbjct: 380 WCEEVDDIECVFTDYFTSIFTSTNPSDVQLNDVLCCVDPVVTEECNTWLLKPFSKEELYV 439
Query: 729 VVKKMGALKAPGPDGFQGCFYQQCWEIVGPSIIDCVQDFFNKGCMNTSFNETFIALIPKI 908
+ +M KAPGPDG FYQ+ W I+G + V + + N T IALIPK+
Sbjct: 440 ALSQMHPCKAPGPDGMHAIFYQKFWHIIGDDVTQFVSSILHGSISPSCINHTNIALIPKV 499
Query: 909 SNPDHMSKFRPISLCNFCYKIIAKILANRLKSHISKIVSPFQGAFIKGRNIGDNIGLASE 1088
NP ++FRPI+LCN YK+++K L RLK + ++VS Q AF+ GR I DN +A E
Sbjct: 500 KNPTTPAEFRPIALCNVVYKLVSKALVIRLKDFLPRLVSENQSAFVPGRLITDNALIAME 559
Query: 1089 MFHHMQHM-KTKKGFVALKMDMAKAYDRVEWSFIDNIFQRLGFSARWRQLISQCISTVSY 1265
+FH M+H +++KG +A+K+DM+KAYDRVEW F+ + +GF RW LI C+S+VSY
Sbjct: 560 VFHSMKHRNRSRKGTIAMKLDMSKAYDRVEWGFLRKLLLTMGFDGRWVNLIMSCVSSVSY 619
Query: 1266 RVMLNGSPLDKFTPDRGLRQGDPLSPYLFILVAEALSRMIAEAENKGEIHGIKIRRNAPP 1445
++NG TP RGLR GDPLSPYLFIL+A+A S+MI + + ++HG K R+ P
Sbjct: 620 SFIINGGVCGSVTPARGLRHGDPLSPYLFILIADAFSKMIQKKVQEKQLHGAKASRSGPV 679
Query: 1446 ISHLLYADDLILFTKANLAESGRMKLILTDYCKASGQKINYGKSSIYCSKNVHKLHSKLL 1625
ISHL +AD +LFT+A+ E + IL Y +ASGQKINY KS + SK V + L
Sbjct: 680 ISHLFFADVSLLFTRASRQECAIIVEILNLYEQASGQKINYDKSEVSFSKGVSIAQKEEL 739
Query: 1626 KRFWKMRFFEKKDKYLGVP 1682
+M+ E+ KYLG+P
Sbjct: 740 SNILQMKQVERHMKYLGIP 758