BLASTX nr result
ID: Coptis21_contig00018425
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00018425 (325 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002514767.1| conserved hypothetical protein [Ricinus comm... 94 1e-17 ref|XP_002871714.1| hypothetical protein ARALYDRAFT_488483 [Arab... 91 1e-16 ref|XP_002316166.1| predicted protein [Populus trichocarpa] gi|2... 91 1e-16 ref|XP_002265872.2| PREDICTED: conserved oligomeric Golgi comple... 90 2e-16 emb|CBI18625.3| unnamed protein product [Vitis vinifera] 90 2e-16 >ref|XP_002514767.1| conserved hypothetical protein [Ricinus communis] gi|223545818|gb|EEF47321.1| conserved hypothetical protein [Ricinus communis] Length = 1065 Score = 94.0 bits (232), Expect = 1e-17 Identities = 53/79 (67%), Positives = 57/79 (72%) Frame = -3 Query: 254 GFRDAETLFRSKLISEIRNVXXXXXXXXXXXXXELRQLVGNRYRDLIDSADSIVSMKSSC 75 GFRDAETLFRSK ISEIRNV ELRQLVGNRYRDLIDSADSIV MKSSC Sbjct: 19 GFRDAETLFRSKTISEIRNVEATTRKQIDDKKEELRQLVGNRYRDLIDSADSIVLMKSSC 78 Query: 74 ESISTNISLIDQGIKSLTS 18 SI +NI+ I I SL++ Sbjct: 79 HSIYSNIASIQTNITSLSA 97 >ref|XP_002871714.1| hypothetical protein ARALYDRAFT_488483 [Arabidopsis lyrata subsp. lyrata] gi|297317551|gb|EFH47973.1| hypothetical protein ARALYDRAFT_488483 [Arabidopsis lyrata subsp. lyrata] Length = 1067 Score = 90.9 bits (224), Expect = 1e-16 Identities = 54/90 (60%), Positives = 61/90 (67%) Frame = -3 Query: 281 AINSDPSKPGFRDAETLFRSKLISEIRNVXXXXXXXXXXXXXELRQLVGNRYRDLIDSAD 102 A++ S G RDAE+LFR+K +SEIRNV ELRQLVG RYRDLIDSAD Sbjct: 13 AVSLSSSGGGQRDAESLFRTKPMSEIRNVESATRKNIEDKKEELRQLVGTRYRDLIDSAD 72 Query: 101 SIVSMKSSCESISTNISLIDQGIKSLTSFS 12 SIV MKS CESIS NIS I I+SL+S S Sbjct: 73 SIVHMKSLCESISANISSIHGNIRSLSSSS 102 >ref|XP_002316166.1| predicted protein [Populus trichocarpa] gi|222865206|gb|EEF02337.1| predicted protein [Populus trichocarpa] Length = 736 Score = 90.5 bits (223), Expect = 1e-16 Identities = 50/79 (63%), Positives = 57/79 (72%) Frame = -3 Query: 254 GFRDAETLFRSKLISEIRNVXXXXXXXXXXXXXELRQLVGNRYRDLIDSADSIVSMKSSC 75 G+RDAE+LFR+K I EIRNV ELRQLVGNRYRDLIDSADSIV MKS C Sbjct: 20 GYRDAESLFRTKAIPEIRNVESETRQQIEEKKEELRQLVGNRYRDLIDSADSIVHMKSYC 79 Query: 74 ESISTNISLIDQGIKSLTS 18 ESIS NI+ I I+SL++ Sbjct: 80 ESISRNIASIHTNIRSLSA 98 >ref|XP_002265872.2| PREDICTED: conserved oligomeric Golgi complex subunit 1-like [Vitis vinifera] Length = 1067 Score = 90.1 bits (222), Expect = 2e-16 Identities = 52/79 (65%), Positives = 57/79 (72%) Frame = -3 Query: 254 GFRDAETLFRSKLISEIRNVXXXXXXXXXXXXXELRQLVGNRYRDLIDSADSIVSMKSSC 75 G RDAE+LFRSK ISEIRNV ELRQLVGNRYRDLIDSADSI+ MKSSC Sbjct: 18 GNRDAESLFRSKPISEIRNVEATTRKQIQEKKEELRQLVGNRYRDLIDSADSILLMKSSC 77 Query: 74 ESISTNISLIDQGIKSLTS 18 SIS+NIS I I SL++ Sbjct: 78 HSISSNISSIYSAISSLSA 96 >emb|CBI18625.3| unnamed protein product [Vitis vinifera] Length = 1035 Score = 90.1 bits (222), Expect = 2e-16 Identities = 52/79 (65%), Positives = 57/79 (72%) Frame = -3 Query: 254 GFRDAETLFRSKLISEIRNVXXXXXXXXXXXXXELRQLVGNRYRDLIDSADSIVSMKSSC 75 G RDAE+LFRSK ISEIRNV ELRQLVGNRYRDLIDSADSI+ MKSSC Sbjct: 4 GNRDAESLFRSKPISEIRNVEATTRKQIQEKKEELRQLVGNRYRDLIDSADSILLMKSSC 63 Query: 74 ESISTNISLIDQGIKSLTS 18 SIS+NIS I I SL++ Sbjct: 64 HSISSNISSIYSAISSLSA 82