BLASTX nr result

ID: Coptis21_contig00018413 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018413
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79660.1| hypothetical protein VITISV_004324 [Vitis vinifera]    72   5e-11
gb|AAT38747.2| Polyprotein, putative [Solanum demissum]                64   2e-08
emb|CAN79422.1| hypothetical protein VITISV_002126 [Vitis vinifera]    61   1e-07
emb|CAN82937.1| hypothetical protein VITISV_039222 [Vitis vinifera]    61   1e-07
emb|CAN82928.1| hypothetical protein VITISV_025045 [Vitis vinifera]    61   1e-07

>emb|CAN79660.1| hypothetical protein VITISV_004324 [Vitis vinifera]
          Length = 338

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 35/74 (47%), Positives = 50/74 (67%)
 Frame = -3

Query: 251 TLHPDLVNPNSALPTPLIIDDLELPIAKRKRKRACVTKHPLAQFVSYSGISPSYCAYLAA 72
           T+HPD    N  + TP  I +L+LPI  RK KR C T+HPL+ FVS+  +S SY A+++ 
Sbjct: 104 TIHPDKGIENQTISTPNDISNLDLPIVLRKEKRQC-TQHPLSNFVSFENLSSSYRAFVSR 162

Query: 71  TDSIRIPRTISEAL 30
             SI+IP+++ EAL
Sbjct: 163 LSSIKIPKSVQEAL 176


>gb|AAT38747.2| Polyprotein, putative [Solanum demissum]
          Length = 1402

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 31/76 (40%), Positives = 49/76 (64%)
 Frame = -3

Query: 242  PDLVNPNSALPTPLIIDDLELPIAKRKRKRACVTKHPLAQFVSYSGISPSYCAYLAATDS 63
            P L + +     P   ++L++PIA RK KR C + + +A F+SY  +SP+ C+ +A+ DS
Sbjct: 851  PTLSSSDPLPVNPSPTENLDIPIALRKGKRQCPSIYSIANFISYDHLSPTSCSLIASLDS 910

Query: 62   IRIPRTISEALEHRPG 15
            I +P+T+ EAL H PG
Sbjct: 911  IFVPKTVREALNH-PG 925


>emb|CAN79422.1| hypothetical protein VITISV_002126 [Vitis vinifera]
          Length = 1065

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 34/81 (41%), Positives = 46/81 (56%), Gaps = 12/81 (14%)
 Frame = -3

Query: 233 VNPNSALPTPLI------------IDDLELPIAKRKRKRACVTKHPLAQFVSYSGISPSY 90
           ++ NS+LP   I            IDD  LPIA RK  R C T HP+  +V+Y G+SPSY
Sbjct: 570 IDSNSSLPEENIGEDRAGEVLSPSIDDSTLPIALRKGVRRC-TDHPIGNYVTYEGLSPSY 628

Query: 89  CAYLAATDSIRIPRTISEALE 27
            A+  + D  ++P TI EAL+
Sbjct: 629 RAFATSLDDTQVPNTIQEALK 649


>emb|CAN82937.1| hypothetical protein VITISV_039222 [Vitis vinifera]
          Length = 1193

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 34/81 (41%), Positives = 46/81 (56%), Gaps = 12/81 (14%)
 Frame = -3

Query: 233  VNPNSALPTPLI------------IDDLELPIAKRKRKRACVTKHPLAQFVSYSGISPSY 90
            ++ NS+LP   I            IDD  LPIA RK  R C T HP+  +V+Y G+SPSY
Sbjct: 954  IDSNSSLPEENIGEDRAGEVLIPSIDDSTLPIALRKGVRRC-TDHPIGNYVTYEGLSPSY 1012

Query: 89   CAYLAATDSIRIPRTISEALE 27
             A+  + D  ++P TI EAL+
Sbjct: 1013 RAFATSLDDTQVPNTIQEALK 1033


>emb|CAN82928.1| hypothetical protein VITISV_025045 [Vitis vinifera]
          Length = 1468

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 34/81 (41%), Positives = 46/81 (56%), Gaps = 12/81 (14%)
 Frame = -3

Query: 233  VNPNSALPTPLI------------IDDLELPIAKRKRKRACVTKHPLAQFVSYSGISPSY 90
            ++ NS+LP   I            IDD  LPIA RK  R C T HP+  +V+Y G+SPSY
Sbjct: 899  IDSNSSLPEENIGEDRAGEVLIPSIDDSTLPIALRKGVRRC-TDHPIGNYVTYEGLSPSY 957

Query: 89   CAYLAATDSIRIPRTISEALE 27
             A+  + D  ++P TI EAL+
Sbjct: 958  RAFATSLDDTQVPNTIQEALK 978


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