BLASTX nr result

ID: Coptis21_contig00018396 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018396
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631470.1| PREDICTED: uncharacterized protein LOC100248...   214   6e-54
emb|CBI33802.3| unnamed protein product [Vitis vinifera]              214   6e-54
ref|XP_002303447.1| predicted protein [Populus trichocarpa] gi|2...   204   8e-51
ref|XP_002518995.1| GTP-binding  protein alpha subunit, gna, put...   202   2e-50
ref|XP_002326558.1| predicted protein [Populus trichocarpa] gi|2...   199   1e-49

>ref|XP_003631470.1| PREDICTED: uncharacterized protein LOC100248864 [Vitis vinifera]
          Length = 863

 Score =  214 bits (545), Expect = 6e-54
 Identities = 100/128 (78%), Positives = 111/128 (86%), Gaps = 2/128 (1%)
 Frame = -1

Query: 378  FETMVKHSCFRNTPFMLILNKYDVFGEKINRVPLSVCKWFNDFSPVRPHHNNQSLAHQAY 199
            FETMV+H CF+ TPF+LILNKYDVF EK+NRVPLS C+WFNDFSPVRPHHNNQSLAHQAY
Sbjct: 729  FETMVRHPCFKETPFVLILNKYDVFEEKVNRVPLSSCEWFNDFSPVRPHHNNQSLAHQAY 788

Query: 198  YYVVMKFKDLYASLTDQELFVGPARARERATVDKVFKYIREVLKWDDEKE--VYEGAEDS 25
            YY+ MKFKDLYASLT Q+LFV  ARAR+R T+D+ FKYI+EVLKWDDEKE   Y G EDS
Sbjct: 789  YYIAMKFKDLYASLTSQKLFVAQARARDRVTIDEAFKYIKEVLKWDDEKEETYYGGVEDS 848

Query: 24   FSSTDASS 1
            F STD SS
Sbjct: 849  FYSTDISS 856


>emb|CBI33802.3| unnamed protein product [Vitis vinifera]
          Length = 735

 Score =  214 bits (545), Expect = 6e-54
 Identities = 100/128 (78%), Positives = 111/128 (86%), Gaps = 2/128 (1%)
 Frame = -1

Query: 378 FETMVKHSCFRNTPFMLILNKYDVFGEKINRVPLSVCKWFNDFSPVRPHHNNQSLAHQAY 199
           FETMV+H CF+ TPF+LILNKYDVF EK+NRVPLS C+WFNDFSPVRPHHNNQSLAHQAY
Sbjct: 601 FETMVRHPCFKETPFVLILNKYDVFEEKVNRVPLSSCEWFNDFSPVRPHHNNQSLAHQAY 660

Query: 198 YYVVMKFKDLYASLTDQELFVGPARARERATVDKVFKYIREVLKWDDEKE--VYEGAEDS 25
           YY+ MKFKDLYASLT Q+LFV  ARAR+R T+D+ FKYI+EVLKWDDEKE   Y G EDS
Sbjct: 661 YYIAMKFKDLYASLTSQKLFVAQARARDRVTIDEAFKYIKEVLKWDDEKEETYYGGVEDS 720

Query: 24  FSSTDASS 1
           F STD SS
Sbjct: 721 FYSTDISS 728


>ref|XP_002303447.1| predicted protein [Populus trichocarpa] gi|222840879|gb|EEE78426.1|
           predicted protein [Populus trichocarpa]
          Length = 349

 Score =  204 bits (518), Expect = 8e-51
 Identities = 97/129 (75%), Positives = 112/129 (86%), Gaps = 3/129 (2%)
 Frame = -1

Query: 378 FETMVKHSCFRNTPFMLILNKYDVFGEKINRVPLSVCKWFNDFSPVRPHHNNQSLAHQAY 199
           FETM++H CF++TPF+LILNKYDVF EK+NRV LS C+WFNDFSPV+PHHNNQSLAHQAY
Sbjct: 214 FETMIRHPCFKDTPFVLILNKYDVFEEKVNRVHLSACEWFNDFSPVQPHHNNQSLAHQAY 273

Query: 198 YYVVMKFKDLYASLTDQELFVGPARARERATVDKVFKYIREVLKWDDEKE--VYEGAEDS 25
           YYV MKFKDLYAS+T ++LFV  ARAR+R T+D+ FKY REVLKWD+EKE   Y GAEDS
Sbjct: 274 YYVAMKFKDLYASITGRKLFVWQARARDRVTIDEAFKYTREVLKWDEEKEDNYYGGAEDS 333

Query: 24  F-SSTDASS 1
           F SSTD SS
Sbjct: 334 FYSSTDMSS 342


>ref|XP_002518995.1| GTP-binding  protein alpha subunit, gna, putative [Ricinus communis]
            gi|223541982|gb|EEF43528.1| GTP-binding protein alpha
            subunit, gna, putative [Ricinus communis]
          Length = 1203

 Score =  202 bits (515), Expect = 2e-50
 Identities = 94/129 (72%), Positives = 111/129 (86%), Gaps = 3/129 (2%)
 Frame = -1

Query: 378  FETMVKHSCFRNTPFMLILNKYDVFGEKINRVPLSVCKWFNDFSPVRPHHNNQSLAHQAY 199
            FETM++H CF+NTPF+L+LNKYD+F EK+NRV LS C+WFNDFSP+RPHHN+Q+LAHQAY
Sbjct: 726  FETMIRHPCFKNTPFVLVLNKYDLFEEKVNRVQLSACEWFNDFSPLRPHHNSQTLAHQAY 785

Query: 198  YYVVMKFKDLYASLTDQELFVGPARARERATVDKVFKYIREVLKWDDEKE---VYEGAED 28
            YYV MKFKDLYASLT ++LFV  ARAR+R T+D+ FKYIREVLKWD+EKE      GAED
Sbjct: 786  YYVAMKFKDLYASLTGRKLFVWQARARDRVTIDEAFKYIREVLKWDEEKEDNYYGGGAED 845

Query: 27   SFSSTDASS 1
            SF STD SS
Sbjct: 846  SFYSTDMSS 854


>ref|XP_002326558.1| predicted protein [Populus trichocarpa] gi|222833880|gb|EEE72357.1|
            predicted protein [Populus trichocarpa]
          Length = 853

 Score =  199 bits (507), Expect = 1e-49
 Identities = 92/128 (71%), Positives = 109/128 (85%), Gaps = 2/128 (1%)
 Frame = -1

Query: 378  FETMVKHSCFRNTPFMLILNKYDVFGEKINRVPLSVCKWFNDFSPVRPHHNNQSLAHQAY 199
            FETM++H CF++TPF+LILNKYD+F EK+NRV LS C+WFNDFSPV+PHHNNQSLAHQAY
Sbjct: 719  FETMIRHPCFKDTPFVLILNKYDIFEEKVNRVHLSACEWFNDFSPVQPHHNNQSLAHQAY 778

Query: 198  YYVVMKFKDLYASLTDQELFVGPARARERATVDKVFKYIREVLKWDDEKE--VYEGAEDS 25
            YYV MKFKDLYAS+T ++LFV   RAR+R T+D+ FKY REVL+WD+EKE   Y  AEDS
Sbjct: 779  YYVAMKFKDLYASITGRKLFVWQTRARDRVTIDEAFKYTREVLRWDEEKEDNYYGVAEDS 838

Query: 24   FSSTDASS 1
            F STD SS
Sbjct: 839  FYSTDMSS 846


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