BLASTX nr result

ID: Coptis21_contig00018384 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018384
         (942 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274479.2| PREDICTED: uncharacterized protein LOC100263...   182   2e-61
emb|CBI40380.3| unnamed protein product [Vitis vinifera]              182   2e-61
ref|XP_002511863.1| CRP, putative [Ricinus communis] gi|22354904...   183   3e-59
ref|XP_002302587.1| predicted protein [Populus trichocarpa] gi|2...   174   4e-56
ref|XP_004155825.1| PREDICTED: mediator of RNA polymerase II tra...   172   3e-55

>ref|XP_002274479.2| PREDICTED: uncharacterized protein LOC100263628 [Vitis vinifera]
          Length = 2272

 Score =  182 bits (463), Expect(2) = 2e-61
 Identities = 86/110 (78%), Positives = 96/110 (87%)
 Frame = +2

Query: 611 KEHLNGRLGPPDYYPQTPNCPEETLTREYVQHGYKETVDGLEETREITFSQLGTFTKPVV 790
           KE LN RLGPPD++PQT  CPEETLT+EYVQHGY+ETV GLE+ REI  +Q+  F+KP V
Sbjct: 57  KESLNSRLGPPDFHPQTSTCPEETLTQEYVQHGYRETVVGLEDAREIALTQIQAFSKPTV 116

Query: 791 VKCKEAIRKRLRAINESRAQKRKAGQVYGEPLSGSLLARPHVFPEQRPCG 940
           +KCKEAIRKRLRAINESRAQKRKAGQVYG PLSGSLL +P VFPEQRPCG
Sbjct: 117 LKCKEAIRKRLRAINESRAQKRKAGQVYGVPLSGSLLTKPCVFPEQRPCG 166



 Score = 80.5 bits (197), Expect(2) = 2e-61
 Identities = 37/61 (60%), Positives = 48/61 (78%)
 Frame = +1

Query: 331 MQRYPAASCGGGASNHSVGGASARDTARAETSFPSTNFSLNPRRQAQLTPYKLTCEKEHL 510
           MQRY A +C    +++++GG SARD+ARA++S  S NFSLN RRQ+QLTPYKL C+KE L
Sbjct: 1   MQRYHAPNCNSAVNSNAIGGPSARDSARADSSSLSANFSLNSRRQSQLTPYKLKCDKESL 60

Query: 511 N 513
           N
Sbjct: 61  N 61


>emb|CBI40380.3| unnamed protein product [Vitis vinifera]
          Length = 2037

 Score =  182 bits (463), Expect(2) = 2e-61
 Identities = 86/110 (78%), Positives = 96/110 (87%)
 Frame = +2

Query: 611 KEHLNGRLGPPDYYPQTPNCPEETLTREYVQHGYKETVDGLEETREITFSQLGTFTKPVV 790
           KE LN RLGPPD++PQT  CPEETLT+EYVQHGY+ETV GLE+ REI  +Q+  F+KP V
Sbjct: 57  KESLNSRLGPPDFHPQTSTCPEETLTQEYVQHGYRETVVGLEDAREIALTQIQAFSKPTV 116

Query: 791 VKCKEAIRKRLRAINESRAQKRKAGQVYGEPLSGSLLARPHVFPEQRPCG 940
           +KCKEAIRKRLRAINESRAQKRKAGQVYG PLSGSLL +P VFPEQRPCG
Sbjct: 117 LKCKEAIRKRLRAINESRAQKRKAGQVYGVPLSGSLLTKPCVFPEQRPCG 166



 Score = 80.5 bits (197), Expect(2) = 2e-61
 Identities = 37/61 (60%), Positives = 48/61 (78%)
 Frame = +1

Query: 331 MQRYPAASCGGGASNHSVGGASARDTARAETSFPSTNFSLNPRRQAQLTPYKLTCEKEHL 510
           MQRY A +C    +++++GG SARD+ARA++S  S NFSLN RRQ+QLTPYKL C+KE L
Sbjct: 1   MQRYHAPNCNSAVNSNAIGGPSARDSARADSSSLSANFSLNSRRQSQLTPYKLKCDKESL 60

Query: 511 N 513
           N
Sbjct: 61  N 61


>ref|XP_002511863.1| CRP, putative [Ricinus communis] gi|223549043|gb|EEF50532.1| CRP,
           putative [Ricinus communis]
          Length = 2264

 Score =  183 bits (465), Expect(2) = 3e-59
 Identities = 89/111 (80%), Positives = 100/111 (90%), Gaps = 1/111 (0%)
 Frame = +2

Query: 611 KEHLNGRLGPPDYYPQTPNCPEETLTREYVQHGYKETVDGLEETREITFSQLGTFT-KPV 787
           KE LN RLGPPD++PQTPNCPEETLTREYVQ GY+ETV+GLEE REI+ SQ+  F+ KPV
Sbjct: 57  KEPLNSRLGPPDFHPQTPNCPEETLTREYVQSGYRETVEGLEEAREISLSQVQAFSSKPV 116

Query: 788 VVKCKEAIRKRLRAINESRAQKRKAGQVYGEPLSGSLLARPHVFPEQRPCG 940
           V+KC+EAIRK LRAINESRAQKRKAGQVYG PLSGSLLA+P VFPEQ+PCG
Sbjct: 117 VLKCREAIRKCLRAINESRAQKRKAGQVYGVPLSGSLLAKPGVFPEQKPCG 167



 Score = 72.4 bits (176), Expect(2) = 3e-59
 Identities = 35/61 (57%), Positives = 42/61 (68%)
 Frame = +1

Query: 331 MQRYPAASCGGGASNHSVGGASARDTARAETSFPSTNFSLNPRRQAQLTPYKLTCEKEHL 510
           MQRY AASC G  +N+ + GAS RDT RA+ S  + NF +N RR   LTPYKL C+KE L
Sbjct: 1   MQRYHAASCTGAVNNNVIVGASVRDTVRADPSSLAANFPINSRRPPPLTPYKLKCDKEPL 60

Query: 511 N 513
           N
Sbjct: 61  N 61


>ref|XP_002302587.1| predicted protein [Populus trichocarpa] gi|222844313|gb|EEE81860.1|
           predicted protein [Populus trichocarpa]
          Length = 2219

 Score =  174 bits (440), Expect(2) = 4e-56
 Identities = 83/110 (75%), Positives = 93/110 (84%)
 Frame = +2

Query: 611 KEHLNGRLGPPDYYPQTPNCPEETLTREYVQHGYKETVDGLEETREITFSQLGTFTKPVV 790
           KE LN RLGPPD++PQTPNCPEET+T EYV+ GYK+ V+GLEE REI  +Q  +FT PVV
Sbjct: 57  KEPLNSRLGPPDFHPQTPNCPEETVTNEYVEAGYKDAVEGLEEAREILHTQAQSFTSPVV 116

Query: 791 VKCKEAIRKRLRAINESRAQKRKAGQVYGEPLSGSLLARPHVFPEQRPCG 940
            KCKEAIRK LRAINESRAQKRKAGQVYG PLSGSLL +P V+PEQR CG
Sbjct: 117 KKCKEAIRKCLRAINESRAQKRKAGQVYGVPLSGSLLTKPGVYPEQRSCG 166



 Score = 71.6 bits (174), Expect(2) = 4e-56
 Identities = 32/61 (52%), Positives = 42/61 (68%)
 Frame = +1

Query: 331 MQRYPAASCGGGASNHSVGGASARDTARAETSFPSTNFSLNPRRQAQLTPYKLTCEKEHL 510
           MQRY  A C    +N S+GG S+RD+ R ++S  ++NFS+NPRR   L PYKL C+KE L
Sbjct: 1   MQRYHTAGCTSAVNNSSIGGTSSRDSTRTDSSSLASNFSINPRRPPPLIPYKLKCDKEPL 60

Query: 511 N 513
           N
Sbjct: 61  N 61


>ref|XP_004155825.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           12-like [Cucumis sativus]
          Length = 2254

 Score =  172 bits (435), Expect(2) = 3e-55
 Identities = 80/110 (72%), Positives = 95/110 (86%)
 Frame = +2

Query: 611 KEHLNGRLGPPDYYPQTPNCPEETLTREYVQHGYKETVDGLEETREITFSQLGTFTKPVV 790
           KE LN RLGPPD++PQT +CPEE LTREYVQ GY+ETV+GLEE+REI  +Q+  F+K +V
Sbjct: 57  KESLNNRLGPPDFHPQTSSCPEENLTREYVQSGYRETVEGLEESREILLTQVQAFSKHLV 116

Query: 791 VKCKEAIRKRLRAINESRAQKRKAGQVYGEPLSGSLLARPHVFPEQRPCG 940
           +KCK+A RKRLRAIN+SRAQKRKAGQVYG PLS SLL +P +FPEQRPCG
Sbjct: 117 IKCKDATRKRLRAINDSRAQKRKAGQVYGVPLSVSLLTKPGIFPEQRPCG 166



 Score = 70.5 bits (171), Expect(2) = 3e-55
 Identities = 35/61 (57%), Positives = 40/61 (65%)
 Frame = +1

Query: 331 MQRYPAASCGGGASNHSVGGASARDTARAETSFPSTNFSLNPRRQAQLTPYKLTCEKEHL 510
           MQRY  A C    +N ++GG SARDT RA++S    NF LN RR A LT YKL CEKE L
Sbjct: 1   MQRYHPAGCTSAVNNSAIGGPSARDTVRADSSSLPGNFPLNSRRPAPLTAYKLKCEKESL 60

Query: 511 N 513
           N
Sbjct: 61  N 61


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