BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018382
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFD22619.1| dicer-like 2 protein [Nicotiana attenuata]              91   1e-16
ref|XP_002514810.1| ATP binding protein, putative [Ricinus commu...    88   6e-16
ref|XP_004139098.1| PREDICTED: endoribonuclease Dicer homolog 2-...    81   8e-14
ref|NP_001050564.1| Os03g0583900 [Oryza sativa Japonica Group] g...    81   1e-13
ref|XP_002269915.2| PREDICTED: endoribonuclease Dicer homolog 2-...    81   1e-13

>gb|AFD22619.1| dicer-like 2 protein [Nicotiana attenuata]
          Length = 1403

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 41/89 (46%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
 Frame = -2

Query: 264  HWSHCPEKSCLNYVHSNDKVICRCMLKNSVVVTPHNGCVYCVSGFLDGLDGNSIMQSKR- 88
            H   C  +     V++   V+C CML+NS+V TPHNG VYC++GFLD LD NS+++ +  
Sbjct: 815  HIDCCSTQGRKRSVNTKTGVVCSCMLENSLVCTPHNGYVYCITGFLDNLDCNSLLEQRTG 874

Query: 87   EALRYKEYYQSKHGIKLQHEGQTLLRGRH 1
            E++ Y EYY+ +H I L  +G+ LLRG+H
Sbjct: 875  ESITYIEYYKKRHRINLCFDGEQLLRGKH 903


>ref|XP_002514810.1| ATP binding protein, putative [Ricinus communis]
            gi|223545861|gb|EEF47364.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 1388

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 41/86 (47%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
 Frame = -2

Query: 255  HCPEKSCLNYVHSNDKVICRCMLKNSVVVTPHNGCVYCVSGFLDGLDGNSIMQSKREALR 76
            +CP K     + + D V+C+C L+NSVV TPHNG VY + G LD L+G+S+++ +    +
Sbjct: 804  NCPLKEAACVIQTKDGVVCKCTLQNSVVYTPHNGKVYFIDGTLDHLNGHSLLELRNGYHK 863

Query: 75   -YKEYYQSKHGIKLQHEGQTLLRGRH 1
             Y EYY+ +HGIKL  + Q LLRGRH
Sbjct: 864  SYMEYYKDQHGIKLHFDQQLLLRGRH 889


>ref|XP_004139098.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Cucumis sativus]
          Length = 1393

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 38/75 (50%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
 Frame = -2

Query: 225  VHSNDKVICRCMLKNSVVVTPHNGCVYCVSGFLDGLDGNSIMQ-SKREALRYKEYYQSKH 49
            V +   ++C C L+NSVV TPHNG VYC++  L  L+GNS+++  K E + YKEYY+ +H
Sbjct: 817  VPTKSGLVCICRLQNSVVYTPHNGHVYCITSVLSELNGNSLLKIRKNEMMAYKEYYKVRH 876

Query: 48   GIKLQHEGQTLLRGR 4
            GI L+ E Q LLRG+
Sbjct: 877  GIDLRFEKQPLLRGK 891


>ref|NP_001050564.1| Os03g0583900 [Oryza sativa Japonica Group]
            gi|122246906|sp|Q10HL3.1|DCL2A_ORYSJ RecName:
            Full=Endoribonuclease Dicer homolog 2a; AltName:
            Full=Dicer-like protein 2a; Short=OsDCL2a
            gi|50399921|gb|AAT76309.1| putative RNA helicase/RNAseIII
            protein, C-terminus truncated [Oryza sativa Japonica
            Group] gi|108709535|gb|ABF97330.1| Type III restriction
            enzyme, res subunit family protein, expressed [Oryza
            sativa Japonica Group] gi|113549035|dbj|BAF12478.1|
            Os03g0583900 [Oryza sativa Japonica Group]
            gi|215701504|dbj|BAG92928.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 1410

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 39/89 (43%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
 Frame = -2

Query: 270  NCHWSHCPEKSCLNYVHSNDKVICRCMLKNSVVVTPHNGCVYCVSGFLDGLDGNSIM-QS 94
            N H +HC     ++ + + D   CRC+LKNS+V TPHN   Y +SGFLD LD NS + Q 
Sbjct: 817  NKHMTHCHSCKDIDLLQTKDGPFCRCILKNSIVCTPHNNIFYVISGFLD-LDANSCLPQH 875

Query: 93   KREALRYKEYYQSKHGIKLQHEGQTLLRG 7
                + YK+Y++++HG+ L  E Q LL G
Sbjct: 876  DGTVVTYKDYFKTRHGLTLTFENQPLLAG 904


>ref|XP_002269915.2| PREDICTED: endoribonuclease Dicer homolog 2-like [Vitis vinifera]
          Length = 1394

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 36/75 (48%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
 Frame = -2

Query: 225  VHSNDKVICRCMLKNSVVVTPHNGCVYCVSGFLDGLDGNSIMQSKREA-LRYKEYYQSKH 49
            +H+    +C C LKNS+V TPH    YC++G L  L+GNS +  K    L YKEYY+ +H
Sbjct: 821  MHTKSGFVCSCTLKNSIVYTPHTSQFYCITGILGELNGNSFLSLKNGGLLTYKEYYRLRH 880

Query: 48   GIKLQHEGQTLLRGR 4
            GI+LQ +G+ LL+GR
Sbjct: 881  GIELQFDGEKLLKGR 895