BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018376
         (1610 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281165.1| PREDICTED: DNA mismatch repair protein Msh6-...   726   0.0  
emb|CBI28088.3| unnamed protein product [Vitis vinifera]              721   0.0  
ref|XP_002514332.1| DNA mismatch repair protein MSH6-2, putative...   718   0.0  
emb|CAN79520.1| hypothetical protein VITISV_034626 [Vitis vinifera]   709   0.0  
ref|XP_004167559.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch...   705   0.0  

>ref|XP_002281165.1| PREDICTED: DNA mismatch repair protein Msh6-2 [Vitis vinifera]
          Length = 1122

 Score =  726 bits (1873), Expect = 0.0
 Identities = 363/535 (67%), Positives = 441/535 (82%)
 Frame = +3

Query: 6    SLVNLEIFGNSVDGGTAGTLYKYLDNCLTASGKRLLRSWICHPLKDVGEINDRLNVVKGL 185
            +LVNLEIF N+ DGG++GTLYKYLDNC+T+SGKRLLR+WICHPLKDV  IN+RLNVV+ L
Sbjct: 567  TLVNLEIFSNNADGGSSGTLYKYLDNCVTSSGKRLLRNWICHPLKDVQGINNRLNVVEHL 626

Query: 186  IEHPEISLILAQYLRRIPDIERLLGRVKASVGSSATLLLPLVGEKILKQRVKLYGTLVKG 365
            + + E    +AQ LR++PD+ERLLG+VKASV SSA LLLP  G+K+LKQRVK++G LVKG
Sbjct: 627  MTNTETMSFIAQCLRKLPDLERLLGQVKASVQSSALLLLPFFGKKLLKQRVKVFGLLVKG 686

Query: 366  MRVGIDLLMLLQEKEQEIFSLSKILDIPLRSGTTRLDELITQFEATVESDFHKYQDDVLA 545
            +RV IDLL+ LQ++   + SLS++L +P+ SG++ +D+L+TQFEA ++SDF  Y++  + 
Sbjct: 687  LRVAIDLLVQLQKEGHIMPSLSEVLKLPMLSGSSGVDKLLTQFEAAIDSDFPNYENHDVT 746

Query: 546  SSDAQMLSVLIELFAENATRWSQVIHALNCLDVLRSFAVTASSSSGFMCRPTFLSSGSRS 725
             SDA++LS+LIELF E  T+W QVIHA+N +DVLRSFAV A+ S G M RP  L     +
Sbjct: 747  DSDAEILSILIELFIEKTTQWLQVIHAINHIDVLRSFAVIANFSCGAMSRPVILPHSEPA 806

Query: 726  TISCQETGGPVLKMKGLWHPYAALGASWDTVVPNDLYLGDDTSGYCPHTLLLTGPNMGGK 905
            T+S  ET GP+LK++GLWHP+A +G +    VPND++LG+DT G  P TLLLTGPNMGGK
Sbjct: 807  TLS-GETRGPLLKIRGLWHPFA-IGENGGLPVPNDIHLGEDTDGNHPRTLLLTGPNMGGK 864

Query: 906  STLLRATCLAVVLAQLGCYVPCETCVLSPVDTIFTRLGATDRIMTGESTFLIECTETASV 1085
            STLLRATCLAV+LAQLG YVPC+ C+LS VD +FTRLGATDRIMTGESTF IECTETASV
Sbjct: 865  STLLRATCLAVILAQLGSYVPCKMCILSLVDVVFTRLGATDRIMTGESTFFIECTETASV 924

Query: 1086 LQNATHDSLVILDELGRGTSTFDGYAIAYAVFRHLVEKVNCRLLFATHYHSLTKEFASHP 1265
            L+NAT DSLV+LDELGRGTSTFDGYAIAYAVFRHLVEKVNCRLLFATHYH LTKEFASHP
Sbjct: 925  LRNATQDSLVLLDELGRGTSTFDGYAIAYAVFRHLVEKVNCRLLFATHYHPLTKEFASHP 984

Query: 1266 TVTLQHMACAFKPNVESTFGGDRELVFLYRLASGACPESYGLQVALMAGIPKKLVEVASK 1445
             VTLQHMAC F    E + GG++ELVFLY+L SGACPESYGLQVALMAG+PK++VE AS 
Sbjct: 985  HVTLQHMACTFNLKGEKSSGGEQELVFLYQLTSGACPESYGLQVALMAGVPKEVVEAAST 1044

Query: 1446 VGQMMKDSIGKNFRSSEQRSEFSTLHEGWLKTLLGFAKKGGSSLDEDACDTFLCL 1610
             G+MMK SIG++FR+SEQRSEFSTLHE WLK LL  ++ G  + D+DA DT  CL
Sbjct: 1045 AGRMMKQSIGESFRTSEQRSEFSTLHEEWLKALLTVSRLGEHNFDDDAWDTLFCL 1099


>emb|CBI28088.3| unnamed protein product [Vitis vinifera]
          Length = 1126

 Score =  721 bits (1860), Expect = 0.0
 Identities = 363/537 (67%), Positives = 441/537 (82%), Gaps = 2/537 (0%)
 Frame = +3

Query: 6    SLVNLEIFGNSVDGGTAG--TLYKYLDNCLTASGKRLLRSWICHPLKDVGEINDRLNVVK 179
            +LVNLEIF N+ DGG++G  TLYKYLDNC+T+SGKRLLR+WICHPLKDV  IN+RLNVV+
Sbjct: 569  TLVNLEIFSNNADGGSSGKCTLYKYLDNCVTSSGKRLLRNWICHPLKDVQGINNRLNVVE 628

Query: 180  GLIEHPEISLILAQYLRRIPDIERLLGRVKASVGSSATLLLPLVGEKILKQRVKLYGTLV 359
             L+ + E    +AQ LR++PD+ERLLG+VKASV SSA LLLP  G+K+LKQRVK++G LV
Sbjct: 629  HLMTNTETMSFIAQCLRKLPDLERLLGQVKASVQSSALLLLPFFGKKLLKQRVKVFGLLV 688

Query: 360  KGMRVGIDLLMLLQEKEQEIFSLSKILDIPLRSGTTRLDELITQFEATVESDFHKYQDDV 539
            KG+RV IDLL+ LQ++   + SLS++L +P+ SG++ +D+L+TQFEA ++SDF  Y++  
Sbjct: 689  KGLRVAIDLLVQLQKEGHIMPSLSEVLKLPMLSGSSGVDKLLTQFEAAIDSDFPNYENHD 748

Query: 540  LASSDAQMLSVLIELFAENATRWSQVIHALNCLDVLRSFAVTASSSSGFMCRPTFLSSGS 719
            +  SDA++LS+LIELF E  T+W QVIHA+N +DVLRSFAV A+ S G M RP  L    
Sbjct: 749  VTDSDAEILSILIELFIEKTTQWLQVIHAINHIDVLRSFAVIANFSCGAMSRPVILPHSE 808

Query: 720  RSTISCQETGGPVLKMKGLWHPYAALGASWDTVVPNDLYLGDDTSGYCPHTLLLTGPNMG 899
             +T+S  ET GP+LK++GLWHP+A +G +    VPND++LG+DT G  P TLLLTGPNMG
Sbjct: 809  PATLS-GETRGPLLKIRGLWHPFA-IGENGGLPVPNDIHLGEDTDGNHPRTLLLTGPNMG 866

Query: 900  GKSTLLRATCLAVVLAQLGCYVPCETCVLSPVDTIFTRLGATDRIMTGESTFLIECTETA 1079
            GKSTLLRATCLAV+LAQLG YVPC+ C+LS VD +FTRLGATDRIMTGESTF IECTETA
Sbjct: 867  GKSTLLRATCLAVILAQLGSYVPCKMCILSLVDVVFTRLGATDRIMTGESTFFIECTETA 926

Query: 1080 SVLQNATHDSLVILDELGRGTSTFDGYAIAYAVFRHLVEKVNCRLLFATHYHSLTKEFAS 1259
            SVL+NAT DSLV+LDELGRGTSTFDGYAIAYAVFRHLVEKVNCRLLFATHYH LTKEFAS
Sbjct: 927  SVLRNATQDSLVLLDELGRGTSTFDGYAIAYAVFRHLVEKVNCRLLFATHYHPLTKEFAS 986

Query: 1260 HPTVTLQHMACAFKPNVESTFGGDRELVFLYRLASGACPESYGLQVALMAGIPKKLVEVA 1439
            HP VTLQHMAC F    E + GG++ELVFLY+L SGACPESYGLQVALMAG+PK++VE A
Sbjct: 987  HPHVTLQHMACTFNLKGEKSSGGEQELVFLYQLTSGACPESYGLQVALMAGVPKEVVEAA 1046

Query: 1440 SKVGQMMKDSIGKNFRSSEQRSEFSTLHEGWLKTLLGFAKKGGSSLDEDACDTFLCL 1610
            S  G+MMK SIG++FR+SEQRSEFSTLHE WLK LL  ++ G  + D+DA DT  CL
Sbjct: 1047 STAGRMMKQSIGESFRTSEQRSEFSTLHEEWLKALLTVSRLGEHNFDDDAWDTLFCL 1103


>ref|XP_002514332.1| DNA mismatch repair protein MSH6-2, putative [Ricinus communis]
            gi|223546788|gb|EEF48286.1| DNA mismatch repair protein
            MSH6-2, putative [Ricinus communis]
          Length = 1089

 Score =  718 bits (1853), Expect = 0.0
 Identities = 362/537 (67%), Positives = 441/537 (82%), Gaps = 2/537 (0%)
 Frame = +3

Query: 6    SLVNLEIFGNSVDGGTAGTLYKYLDNCLTASGKRLLRSWICHPLKDVGEINDRLNVVKGL 185
            +L+NLEIF N+ DGG +GTL+ YLDNC+T+SGKRLLR W+CHPLK V  IN+RLNVV+ L
Sbjct: 545  TLINLEIFNNNSDGGLSGTLFNYLDNCVTSSGKRLLRKWMCHPLKSVEGINNRLNVVEDL 604

Query: 186  IEHPEISLILAQYLRRIPDIERLLGRVKASVGSSATLLLPLVGEKILKQRVKLYGTLVKG 365
            +   +I L+++QYLR+IPDIER+LGRVKAS  +SA+L+LPL+G+K+L+QRVK++G+LVKG
Sbjct: 605  MTQSDIMLVISQYLRKIPDIERMLGRVKASFQASASLVLPLIGKKVLRQRVKVFGSLVKG 664

Query: 366  MRVGIDLLMLLQEKEQEIFSLSKILDIPLRSGTTRLDELITQFEATVESDFHKYQDDVLA 545
            +R+GIDLL+LLQ++++ I   SK   +P  +G+  LD+ ++QFEA V+S+F  YQ+  + 
Sbjct: 665  LRIGIDLLLLLQKEDRIISLFSKNFKLPELNGSAGLDKFLSQFEAAVDSEFPNYQNHDVT 724

Query: 546  SSDAQMLSVLIELFAENATRWSQVIHALNCLDVLRSFAVTASSSSGFMCRPTFLSSGSRS 725
             S+A+ L VLIELF E A+ WS+VI A+NC+DVLRSFA+TAS SSG M RP  L   S+S
Sbjct: 725  DSEAETLFVLIELFIEKASCWSEVIQAINCIDVLRSFAITASMSSGSMSRPVILPE-SKS 783

Query: 726  TISCQETGGPVLKMKGLWHPYAALGASWDTVVPNDLYLGDDTSGYCPHTLLLTGPNMGGK 905
            ++  Q+ GGPVLK++GLWHP+A LG +    VPNDL+LG+D  GY P TLLLTGPNMGGK
Sbjct: 784  SMFGQDKGGPVLKIRGLWHPFA-LGENGGMPVPNDLHLGEDLDGYLPRTLLLTGPNMGGK 842

Query: 906  STLLRATCLAVVLAQLGCYVPCETCVLSPVDTIFTRLGATDRIMTGESTFLIECTETASV 1085
            STLLRATCLAV+LAQLGC+VP E CVLS VD IFTRLGATDRIMTGESTF IECTETASV
Sbjct: 843  STLLRATCLAVILAQLGCFVPSEKCVLSLVDIIFTRLGATDRIMTGESTFFIECTETASV 902

Query: 1086 LQNATHDSLVILDELGRGTSTFDGYAIAYAVFRHLVEKVNCRLLFATHYHSLTKEFASHP 1265
            L+NAT DSLV+LDELGRGTSTFDGYAIAYAVFRHLVEKVNCRLLFATHYH LTKEF S+P
Sbjct: 903  LKNATQDSLVLLDELGRGTSTFDGYAIAYAVFRHLVEKVNCRLLFATHYHPLTKEFGSNP 962

Query: 1266 TVTLQHMACAFKPNVESTFGGDRELVFLYRLASGACPESYGLQVALMAGIPKKLVEVASK 1445
             V LQHMACAFK   ES    D++LVFLYRLASGACPESYGLQVA+MAGIP+ +VE AS+
Sbjct: 963  RVILQHMACAFKSKSESYSESDQDLVFLYRLASGACPESYGLQVAVMAGIPENVVEAASQ 1022

Query: 1446 VGQMMKDSIGKNFRSSEQRSEFSTLHEGWLKTLLGFAKKGGSSLD--EDACDTFLCL 1610
             GQ+MK SIG++FRSSE+RSEFSTLHE  LKTLL   + GG + D  +D  DT  CL
Sbjct: 1023 AGQVMKKSIGESFRSSEKRSEFSTLHEDGLKTLLSATQIGGCNFDNTDDVYDTLFCL 1079


>emb|CAN79520.1| hypothetical protein VITISV_034626 [Vitis vinifera]
          Length = 1090

 Score =  709 bits (1829), Expect = 0.0
 Identities = 360/535 (67%), Positives = 433/535 (80%)
 Frame = +3

Query: 6    SLVNLEIFGNSVDGGTAGTLYKYLDNCLTASGKRLLRSWICHPLKDVGEINDRLNVVKGL 185
            +LVNLEIF N+ DG    TLYKYLDNC+T+SGKRLLR+WICHPLKDV  IN+RLNVV+ L
Sbjct: 539  TLVNLEIFSNNADG----TLYKYLDNCVTSSGKRLLRNWICHPLKDVQGINNRLNVVEHL 594

Query: 186  IEHPEISLILAQYLRRIPDIERLLGRVKASVGSSATLLLPLVGEKILKQRVKLYGTLVKG 365
            +   E    +AQ LR++PD+ERLLG+VKASV SSA LLLP  G+K+LKQRVK++G LVKG
Sbjct: 595  MTXTETMSFIAQCLRKLPDLERLLGQVKASVQSSALLLLPFFGKKLLKQRVKVFGLLVKG 654

Query: 366  MRVGIDLLMLLQEKEQEIFSLSKILDIPLRSGTTRLDELITQFEATVESDFHKYQDDVLA 545
            +RV I LL+ LQ++   + SLS++L +P+ SG++ +D+L+TQFEA ++SDF  Y++  + 
Sbjct: 655  LRVAIXLLVXLQKEGHIMPSLSEVLKLPMLSGSSGVDKLLTQFEAAIDSDFPNYENHDVT 714

Query: 546  SSDAQMLSVLIELFAENATRWSQVIHALNCLDVLRSFAVTASSSSGFMCRPTFLSSGSRS 725
             SDA++LS+LIELF E  T+W QVIHA+N +DVLRSFAV A+ S G M RP  L     +
Sbjct: 715  DSDAEILSILIELFIEKTTQWLQVIHAINHIDVLRSFAVIANFSCGAMSRPVILPHSEPA 774

Query: 726  TISCQETGGPVLKMKGLWHPYAALGASWDTVVPNDLYLGDDTSGYCPHTLLLTGPNMGGK 905
            T+S  ET GP+LK+ GLWHP+A +G +    VPND++LG+DT G  P TLLLTGPNMGGK
Sbjct: 775  TLS-GETRGPLLKIXGLWHPFA-IGENGGLPVPNDIHLGEDTDGNHPRTLLLTGPNMGGK 832

Query: 906  STLLRATCLAVVLAQLGCYVPCETCVLSPVDTIFTRLGATDRIMTGESTFLIECTETASV 1085
            STLLRATCLAV+LAQLG YVPC+ C+LS VD +FTRLGATDRIMTGESTF IECTETASV
Sbjct: 833  STLLRATCLAVILAQLGSYVPCKMCILSLVDVVFTRLGATDRIMTGESTFFIECTETASV 892

Query: 1086 LQNATHDSLVILDELGRGTSTFDGYAIAYAVFRHLVEKVNCRLLFATHYHSLTKEFASHP 1265
            L+NAT DSLV+LDELGRGTSTFDGYAIAYAVFRHLVEKVNCRLLFATHYH LTKEFASHP
Sbjct: 893  LRNATQDSLVLLDELGRGTSTFDGYAIAYAVFRHLVEKVNCRLLFATHYHPLTKEFASHP 952

Query: 1266 TVTLQHMACAFKPNVESTFGGDRELVFLYRLASGACPESYGLQVALMAGIPKKLVEVASK 1445
             VTLQHMAC F    E + GG++ELVFLY+L SGACPESYGLQVALMAG PK++VE AS 
Sbjct: 953  HVTLQHMACTFNLKGEKSSGGEQELVFLYQLTSGACPESYGLQVALMAGXPKEVVEAAST 1012

Query: 1446 VGQMMKDSIGKNFRSSEQRSEFSTLHEGWLKTLLGFAKKGGSSLDEDACDTFLCL 1610
             G+MMK SIG++FR+SEQRSEFSTLHE WLK LL  ++ G  + D+DA DT  CL
Sbjct: 1013 AGRMMKQSIGESFRTSEQRSEFSTLHEEWLKALLTVSRLGEHNFDDDAWDTLFCL 1067


>ref|XP_004167559.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein MSH7-like
            [Cucumis sativus]
          Length = 1095

 Score =  705 bits (1819), Expect = 0.0
 Identities = 365/537 (67%), Positives = 431/537 (80%), Gaps = 2/537 (0%)
 Frame = +3

Query: 6    SLVNLEIFGNSVDGGTAGTLYKYLDNCLTASGKRLLRSWICHPLKDVGEINDRLNVVKGL 185
            ++VNLEIF N+ DGG +GTLYKYLDNC+T+SGKRLLR WICHPLKDV EIN+RLNVV+ L
Sbjct: 558  TMVNLEIFRNNDDGGLSGTLYKYLDNCVTSSGKRLLRLWICHPLKDVEEINNRLNVVEEL 617

Query: 186  IEHPEISLILAQ-YLRRIPDIERLLGRVKASVGSSATLLLPLVGEKILKQRVKLYGTLVK 362
            +   +I ++L   YLR++PD+ERLLG++KA+V SSA+L+LPL+ +K+ K+RVKL+G+LVK
Sbjct: 618  MAQSDIMVLLGTTYLRKLPDLERLLGQIKATVQSSASLVLPLIRKKLQKRRVKLFGSLVK 677

Query: 363  GMRVGIDLLMLLQEKEQEIFSLSKILDIPLRSGTTRLDELITQFEATVESDFHKYQDDVL 542
            G+R G+DLL+ +Q KE  I SL K++ +P  SG   LD+ +TQFEA V+S+F  YQ+  +
Sbjct: 678  GLRTGLDLLIQVQ-KEGLIISLPKVVKLPQLSGNGGLDQFLTQFEAAVDSEFPDYQNHDV 736

Query: 543  ASSDAQMLSVLIELFAENATRWSQVIHALNCLDVLRSFAVTASSSSGFMCRPTFLSSGSR 722
              S A+ LS+LIELF E AT WS+VIHALNC+DVLRSFA+ A SS G M RP  L   + 
Sbjct: 737  TDSGAERLSILIELFVEKATEWSEVIHALNCVDVLRSFAIIAHSSRGSMSRPLILPQSNN 796

Query: 723  STISCQETGGPVLKMKGLWHPYAALGASWDTVVPNDLYLGDDTSGYCPHTLLLTGPNMGG 902
            S +S  E  GPVLK+ GLWHPYA L  S +T VPND+ LG D   Y P TLLLTGPNMGG
Sbjct: 797  SMLS-PEKQGPVLKINGLWHPYA-LVESGETPVPNDMILGLDQDSYHPRTLLLTGPNMGG 854

Query: 903  KSTLLRATCLAVVLAQLGCYVPCETCVLSPVDTIFTRLGATDRIMTGESTFLIECTETAS 1082
            KSTLLR+TCLAVVLAQLGCYVPCETC LS VDTIFTRLGATDRIMTGESTFL+EC+ETAS
Sbjct: 855  KSTLLRSTCLAVVLAQLGCYVPCETCTLSVVDTIFTRLGATDRIMTGESTFLVECSETAS 914

Query: 1083 VLQNATHDSLVILDELGRGTSTFDGYAIAYAVFRHLVEKVNCRLLFATHYHSLTKEFASH 1262
            VLQ+AT DSLVILDELGRGTSTFDGYAIAYAVFRHL+EKVNCRLLFATHYH LTKEFASH
Sbjct: 915  VLQHATQDSLVILDELGRGTSTFDGYAIAYAVFRHLIEKVNCRLLFATHYHPLTKEFASH 974

Query: 1263 PTVTLQHMACAFKPNVESTFGGDRELVFLYRLASGACPESYGLQVALMAGIPKKLVEVAS 1442
            P V LQHMAC FK         D EL+FLYRL SGACPESYGL+VA MAGIP ++VE AS
Sbjct: 975  PHVMLQHMACTFK---------DHELIFLYRLRSGACPESYGLKVATMAGIPGRVVEAAS 1025

Query: 1443 KVGQMMKDSIGKNFRSSEQRSEFSTLHEGWLKTLLGFAKKGGSSLDE-DACDTFLCL 1610
            +  QMMK +I +NF+SSEQRSEFSTLHE WLKTL+   +  G++LDE DA DT  CL
Sbjct: 1026 RASQMMKQTIKENFKSSEQRSEFSTLHEEWLKTLITVLEFKGNNLDENDAFDTLFCL 1082