BLASTX nr result

ID: Coptis21_contig00018374 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018374
         (644 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518524.1| nuclear transport factor, putative [Ricinus ...   198   6e-49
ref|XP_002267081.1| PREDICTED: nuclear transport factor 2 [Vitis...   194   1e-47
ref|XP_002317209.1| predicted protein [Populus trichocarpa] gi|2...   194   2e-47
ref|XP_004145100.1| PREDICTED: nuclear transport factor 2-like [...   185   7e-45
ref|XP_004153658.1| PREDICTED: nuclear transport factor 2-like [...   182   4e-44

>ref|XP_002518524.1| nuclear transport factor, putative [Ricinus communis]
           gi|223542369|gb|EEF43911.1| nuclear transport factor,
           putative [Ricinus communis]
          Length = 125

 Score =  198 bits (504), Expect = 6e-49
 Identities = 95/125 (76%), Positives = 108/125 (86%)
 Frame = +2

Query: 77  MEEQVELIGKAFVDHYYLLFDTSRPSLSSLYQPTSMLTFEGQKVQGGDDIANKLNQLPFE 256
           MEEQVE +GKAFV+HYY LFD  R SL+SLY P+SMLTFEGQK+ G DDI++KLN LPF+
Sbjct: 1   MEEQVETVGKAFVNHYYNLFDNDRSSLASLYHPSSMLTFEGQKILGVDDISSKLNNLPFD 60

Query: 257 HCKHFITTIDCQPSSVTGGILVFVSGNLQLAGEEHHLRFSQMFHLIPTLQGSFFVQNDIF 436
            CKH I+TID QPSS  GGI+VFVSG+LQLAGEEH LRFSQMFHLIP++QG  FVQNDIF
Sbjct: 61  QCKHAISTIDTQPSSFAGGIVVFVSGSLQLAGEEHPLRFSQMFHLIPSVQGGLFVQNDIF 120

Query: 437 RLNYG 451
           RLNYG
Sbjct: 121 RLNYG 125


>ref|XP_002267081.1| PREDICTED: nuclear transport factor 2 [Vitis vinifera]
          Length = 125

 Score =  194 bits (493), Expect = 1e-47
 Identities = 93/125 (74%), Positives = 106/125 (84%)
 Frame = +2

Query: 77  MEEQVELIGKAFVDHYYLLFDTSRPSLSSLYQPTSMLTFEGQKVQGGDDIANKLNQLPFE 256
           MEEQVE +G+AFVDHYY LFD  R SL SLY  TSMLTFEG KVQG D+I+ KLN LPF+
Sbjct: 1   MEEQVEGLGRAFVDHYYYLFDNDRSSLPSLYHSTSMLTFEGHKVQGVDEISQKLNLLPFD 60

Query: 257 HCKHFITTIDCQPSSVTGGILVFVSGNLQLAGEEHHLRFSQMFHLIPTLQGSFFVQNDIF 436
            C+H I+TID QPSS TGGI+VFVSG+L+L GEEH LRFSQMFHL+P+ +GSFFVQNDIF
Sbjct: 61  QCQHVISTIDSQPSSFTGGIMVFVSGSLKLPGEEHQLRFSQMFHLVPSSEGSFFVQNDIF 120

Query: 437 RLNYG 451
           RLNYG
Sbjct: 121 RLNYG 125


>ref|XP_002317209.1| predicted protein [Populus trichocarpa] gi|222860274|gb|EEE97821.1|
           predicted protein [Populus trichocarpa]
          Length = 123

 Score =  194 bits (492), Expect = 2e-47
 Identities = 93/123 (75%), Positives = 105/123 (85%)
 Frame = +2

Query: 80  EEQVELIGKAFVDHYYLLFDTSRPSLSSLYQPTSMLTFEGQKVQGGDDIANKLNQLPFEH 259
           +EQVE++GKAFVDHYY LFD  R SL+SLYQPTSMLTFEGQK+ G +DI+ KLN LPF +
Sbjct: 1   QEQVEVVGKAFVDHYYNLFDNDRSSLASLYQPTSMLTFEGQKIVGVEDISCKLNNLPFGN 60

Query: 260 CKHFITTIDCQPSSVTGGILVFVSGNLQLAGEEHHLRFSQMFHLIPTLQGSFFVQNDIFR 439
           CKH I+TID QPS+  GGI+VFVSG+LQL GEEHHLRFSQMFHLIPT  G FFVQND FR
Sbjct: 61  CKHIISTIDSQPSAHGGGIVVFVSGSLQLPGEEHHLRFSQMFHLIPTQDGCFFVQNDFFR 120

Query: 440 LNY 448
           LNY
Sbjct: 121 LNY 123


>ref|XP_004145100.1| PREDICTED: nuclear transport factor 2-like [Cucumis sativus]
          Length = 132

 Score =  185 bits (469), Expect = 7e-45
 Identities = 86/126 (68%), Positives = 106/126 (84%)
 Frame = +2

Query: 74  GMEEQVELIGKAFVDHYYLLFDTSRPSLSSLYQPTSMLTFEGQKVQGGDDIANKLNQLPF 253
           GMEE+ ++IGKAFV+HYY LFD  R SLSSLYQP SMLTFEGQ++ G  DI++KL QLPF
Sbjct: 7   GMEEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVHDISSKLQQLPF 66

Query: 254 EHCKHFITTIDCQPSSVTGGILVFVSGNLQLAGEEHHLRFSQMFHLIPTLQGSFFVQNDI 433
           E C+H ++TID QPSSV G IL+FVSG++++  EEH LRFSQMFHL+P+ +G+ FVQNDI
Sbjct: 67  ERCRHVVSTIDTQPSSVHGSILIFVSGSIEIPEEEHPLRFSQMFHLVPSPEGNLFVQNDI 126

Query: 434 FRLNYG 451
           FRLNYG
Sbjct: 127 FRLNYG 132


>ref|XP_004153658.1| PREDICTED: nuclear transport factor 2-like [Cucumis sativus]
          Length = 125

 Score =  182 bits (463), Expect = 4e-44
 Identities = 85/125 (68%), Positives = 105/125 (84%)
 Frame = +2

Query: 77  MEEQVELIGKAFVDHYYLLFDTSRPSLSSLYQPTSMLTFEGQKVQGGDDIANKLNQLPFE 256
           MEE+ ++IGKAFV+HYY LFD  R SLSSLYQP SMLTFEGQ++ G  DI++KL QLPFE
Sbjct: 1   MEEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVHDISSKLQQLPFE 60

Query: 257 HCKHFITTIDCQPSSVTGGILVFVSGNLQLAGEEHHLRFSQMFHLIPTLQGSFFVQNDIF 436
            C+H ++TID QPSSV G IL+FVSG++++  EEH LRFSQMFHL+P+ +G+ FVQNDIF
Sbjct: 61  RCRHVVSTIDTQPSSVHGSILIFVSGSIEIPEEEHPLRFSQMFHLVPSPEGNLFVQNDIF 120

Query: 437 RLNYG 451
           RLNYG
Sbjct: 121 RLNYG 125


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