BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018371
         (450 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]        174   7e-42
gb|AAP53789.1| retrotransposon protein, putative, unclassified [...   173   2e-41
emb|CAE05274.1| OSJNBb0014D23.8 [Oryza sativa Japonica Group]         173   2e-41
gb|ADB85304.1| putative retrotransposon protein [Phyllostachys e...   171   4e-41
gb|ABA95319.1| retrotransposon protein, putative, unclassified [...   170   1e-40

>emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]
          Length = 1586

 Score =  174 bits (441), Expect = 7e-42
 Identities = 82/152 (53%), Positives = 110/152 (72%), Gaps = 3/152 (1%)
 Frame = -2

Query: 449  LAEWWFNTNYHTSLKMPPFKALYGYTPPHL---AIPVEISTSVATVEEFLKQRAVMVELI 279
            LAEWW+NT YHTS++M PF+ALYGY PP +   ++P  +S         ++Q+  +++ +
Sbjct: 1367 LAEWWYNTTYHTSIQMTPFQALYGYPPPQINEFSVPCNVSEEARVT---IEQKDAIIQKL 1423

Query: 278  KEGLLKAQENMKWYADKKRIERTFNVGDLVYLKLQPYRQTSVALRKNHKLSARYYGPFPV 99
            K  L +AQ  +K YAD+ R ERT  VGD+VYLKLQPYRQT+  +R + KL +++YGPF +
Sbjct: 1424 KYSLTEAQRRIKHYADRNRSERTLAVGDMVYLKLQPYRQTAFGIRGSLKLRSKFYGPFKI 1483

Query: 98   LTKIGDVAYKLQLPIGSRIHPVFHVSQLKKKI 3
            + K+G VAYKLQLP GS IHPVFHVSQLKK I
Sbjct: 1484 MEKVGRVAYKLQLPEGSNIHPVFHVSQLKKHI 1515


>gb|AAP53789.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1611

 Score =  173 bits (438), Expect = 2e-41
 Identities = 83/152 (54%), Positives = 112/152 (73%), Gaps = 3/152 (1%)
 Frame = -2

Query: 449  LAEWWFNTNYHTSLKMPPFKALYGYTPPHL---AIPVEISTSVATVEEFLKQRAVMVELI 279
            LAEWW+NT YHTS++M PF+ALYGY PP +   AIP  +S         L+ +A++++ +
Sbjct: 1392 LAEWWYNTTYHTSIQMTPFQALYGYPPPQITEFAIPCNMSEEARVT---LEDKALILQKL 1448

Query: 278  KEGLLKAQENMKWYADKKRIERTFNVGDLVYLKLQPYRQTSVALRKNHKLSARYYGPFPV 99
            K  + +AQ  +K+YADK R ERT  +GD+VYLKLQPYRQ ++ +R + KL ++YYGPF V
Sbjct: 1449 KSSIGEAQRRIKFYADKGRSERTLELGDMVYLKLQPYRQVAMGIRGSLKLRSKYYGPFKV 1508

Query: 98   LTKIGDVAYKLQLPIGSRIHPVFHVSQLKKKI 3
            + K+G VAYKLQLP G+ IHPVFHVSQLKK +
Sbjct: 1509 IEKMGAVAYKLQLPDGAGIHPVFHVSQLKKHL 1540


>emb|CAE05274.1| OSJNBb0014D23.8 [Oryza sativa Japonica Group]
          Length = 1545

 Score =  173 bits (438), Expect = 2e-41
 Identities = 85/149 (57%), Positives = 109/149 (73%)
 Frame = -2

Query: 449  LAEWWFNTNYHTSLKMPPFKALYGYTPPHLAIPVEISTSVATVEEFLKQRAVMVELIKEG 270
            LAE+WFNT+YH++L   PF+ LYGY P H  I  E S S+  +  +L +R +M +L+K+ 
Sbjct: 765  LAEFWFNTSYHSTLFKSPFEVLYGYPPGHFGIR-EDSCSIPDLHAWLSERKLMTQLLKQH 823

Query: 269  LLKAQENMKWYADKKRIERTFNVGDLVYLKLQPYRQTSVALRKNHKLSARYYGPFPVLTK 90
            L++AQ+ MK YADKKR  R F VGD VYLKLQPY Q+SVA R NHKL  +Y+GPF +L K
Sbjct: 824  LIRAQQQMKVYADKKRSFREFVVGDWVYLKLQPYIQSSVARRANHKLCFKYFGPFQILHK 883

Query: 89   IGDVAYKLQLPIGSRIHPVFHVSQLKKKI 3
            +G VAY+LQLP  S +HPVFHVSQLK  +
Sbjct: 884  VGKVAYQLQLPANSAVHPVFHVSQLKHAV 912


>gb|ADB85304.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 335

 Score =  171 bits (434), Expect = 4e-41
 Identities = 86/152 (56%), Positives = 107/152 (70%), Gaps = 3/152 (1%)
 Frame = -2

Query: 449 LAEWWFNTNYHTSLKMPPFKALYGYTPPH---LAIPVEISTSVATVEEFLKQRAVMVELI 279
           LAEWW+NT YHTSLK+ PF+ALYGY PP    L+IP  +S       E   Q+  M+E +
Sbjct: 132 LAEWWYNTTYHTSLKVTPFQALYGYPPPQVGELSIPCNVSEEARITVE---QKEQMLEQL 188

Query: 278 KEGLLKAQENMKWYADKKRIERTFNVGDLVYLKLQPYRQTSVALRKNHKLSARYYGPFPV 99
           K  L  AQ+ MK YADK R ER F VGD+VYLK+QPYR T+  LR + KL +++YGPF V
Sbjct: 189 KSNLHNAQDRMKHYADKSRTERQFQVGDMVYLKMQPYRLTAFGLRGSLKLRSKFYGPFRV 248

Query: 98  LTKIGDVAYKLQLPIGSRIHPVFHVSQLKKKI 3
           L K+G VAY+LQLP  + IHPVFHV+QLKK +
Sbjct: 249 LEKLGTVAYRLQLPEHTLIHPVFHVNQLKKHL 280


>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 955

 Score =  170 bits (431), Expect = 1e-40
 Identities = 80/152 (52%), Positives = 108/152 (71%), Gaps = 3/152 (1%)
 Frame = -2

Query: 449  LAEWWFNTNYHTSLKMPPFKALYGYTPPHLA---IPVEISTSVATVEEFLKQRAVMVELI 279
            LAEWW+NT YHT+++M PFKALYGY+PP ++   +P ++S         L+++  +V+ +
Sbjct: 736  LAEWWYNTTYHTAIQMTPFKALYGYSPPQISEFSVPCDVSQEARVT---LEEKETIVQKL 792

Query: 278  KEGLLKAQENMKWYADKKRIERTFNVGDLVYLKLQPYRQTSVALRKNHKLSARYYGPFPV 99
            K  +  AQ  MK+YAD+ R ER   VGD+VYLKLQPYRQ +  +R + KL  +YYGPF V
Sbjct: 793  KASMEDAQRRMKYYADRNRTERKLEVGDMVYLKLQPYRQNAFGIRGSLKLRGKYYGPFKV 852

Query: 98   LTKIGDVAYKLQLPIGSRIHPVFHVSQLKKKI 3
            L K+G VAY+LQLP  + IHPVFHVSQLKK +
Sbjct: 853  LEKVGAVAYRLQLPEEAAIHPVFHVSQLKKHL 884