BLASTX nr result

ID: Coptis21_contig00018348 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018348
         (1080 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276223.1| PREDICTED: kinesin-4-like [Vitis vinifera]        251   2e-64
emb|CBI34668.3| unnamed protein product [Vitis vinifera]              239   1e-60
ref|XP_002274169.1| PREDICTED: uncharacterized protein LOC100256...   239   1e-60
ref|XP_002318552.1| predicted protein [Populus trichocarpa] gi|2...   215   2e-53
emb|CAN65659.1| hypothetical protein VITISV_000953 [Vitis vinifera]   213   5e-53

>ref|XP_002276223.1| PREDICTED: kinesin-4-like [Vitis vinifera]
          Length = 1088

 Score =  251 bits (641), Expect = 2e-64
 Identities = 142/248 (57%), Positives = 180/248 (72%), Gaps = 2/248 (0%)
 Frame = +3

Query: 339  KQRAELVEWLNDIVPNLSLPVEASDEEVRSCLLDGSVFCSILSRLNP-TRSEDGTCDNSS 515
            K+RA + EWLN ++PNL+LPV+AS EE+R+CL+DG+V C  L+RL P + SE    D+SS
Sbjct: 40   KKRAIVAEWLNSMLPNLNLPVKASVEELRACLIDGAVLCRFLNRLRPGSVSEVRDYDHSS 99

Query: 516  ESRLCTVKSFLAAVLEMGLPKFEVSDLEQGSMTKILECLWTVKAQFNPSFGEDTILTVNT 695
              R   VK FL A+  +G+P FE++DLE+GSM  +LEC+ T+KA         TI TV  
Sbjct: 100  GMRYENVKKFLEALDALGMPGFEIADLEKGSMKTVLECILTLKAH--------TIPTV-C 150

Query: 696  GKNGNQQRKRWKYEAE-SLDGNIGYLGEYSPRGENVVASGDERRKSLSESKFQRVLRSPV 872
            G N       + + +  S  GNIG   +   RG      G++R+KS SESKFQR LRSPV
Sbjct: 151  GNN-------FPFSSSFSKSGNIGPQVDDPSRGPT--PCGEDRQKSFSESKFQRALRSPV 201

Query: 873  MSEPSAALIHHVGHKFHEVFQLKQGRYSDLPAAKISEMLRSNSLDNAPTQSLLSVVNGIL 1052
             SEPSAALI+HVGHKFHEVFQLKQGRY+D+PAAK++EM++SNSLDNAPTQSLLSVVNGIL
Sbjct: 202  KSEPSAALIYHVGHKFHEVFQLKQGRYADIPAAKLTEMMKSNSLDNAPTQSLLSVVNGIL 261

Query: 1053 DESIDRKN 1076
            DES++RKN
Sbjct: 262  DESVERKN 269


>emb|CBI34668.3| unnamed protein product [Vitis vinifera]
          Length = 1071

 Score =  239 bits (609), Expect = 1e-60
 Identities = 136/255 (53%), Positives = 173/255 (67%), Gaps = 2/255 (0%)
 Frame = +3

Query: 321  GSVVG-AKQRAELVEWLNDIVPNLSLPVEASDEEVRSCLLDGSVFCSILSRLNPTRSEDG 497
            G++ G   QR +LVEWLN I+P LSLP+EAS+E++R+CL+DG+V C IL+RL+P   E G
Sbjct: 35   GTIEGNLSQRTQLVEWLNGILPYLSLPLEASEEDLRACLIDGTVLCGILNRLSPGSIEMG 94

Query: 498  TCDNSSESRLCTVKSFLAAVLEMGLPKFEVSDLEQGSMTKILECLWTVKAQFNPSFGEDT 677
                 SES L  +K FLAA+ EMGLP+FE+SDLEQGSM  +L+CL T++A FN + G + 
Sbjct: 95   ---GISESYLENLKRFLAAMEEMGLPRFELSDLEQGSMDAVLQCLQTLRAHFNFNIGGEN 151

Query: 678  ILTVNTGKNGNQQRKRWKY-EAESLDGNIGYLGEYSPRGENVVASGDERRKSLSESKFQR 854
            I         N  RK+W   E E L+G     G+ S  GE+     +ERR SL +SKFQ 
Sbjct: 152  IR--------NYSRKKWNLCEVECLEGFDRSQGDASSHGEHSDEFVEERRNSL-DSKFQH 202

Query: 855  VLRSPVMSEPSAALIHHVGHKFHEVFQLKQGRYSDLPAAKISEMLRSNSLDNAPTQSLLS 1034
            VLR  V SEP AA IHHVGH+F E FQLKQG Y+D PAAKISE++   SL+N PT  L S
Sbjct: 203  VLRRSVFSEPLAASIHHVGHRFQEGFQLKQGGYADFPAAKISELVEQKSLENTPTHLLFS 262

Query: 1035 VVNGILDESIDRKNG 1079
            ++  ILD SI+RKNG
Sbjct: 263  ILINILDGSIERKNG 277


>ref|XP_002274169.1| PREDICTED: uncharacterized protein LOC100256435 [Vitis vinifera]
          Length = 1101

 Score =  239 bits (609), Expect = 1e-60
 Identities = 136/255 (53%), Positives = 173/255 (67%), Gaps = 2/255 (0%)
 Frame = +3

Query: 321  GSVVG-AKQRAELVEWLNDIVPNLSLPVEASDEEVRSCLLDGSVFCSILSRLNPTRSEDG 497
            G++ G   QR +LVEWLN I+P LSLP+EAS+E++R+CL+DG+V C IL+RL+P   E G
Sbjct: 35   GTIEGNLSQRTQLVEWLNGILPYLSLPLEASEEDLRACLIDGTVLCGILNRLSPGSIEMG 94

Query: 498  TCDNSSESRLCTVKSFLAAVLEMGLPKFEVSDLEQGSMTKILECLWTVKAQFNPSFGEDT 677
                 SES L  +K FLAA+ EMGLP+FE+SDLEQGSM  +L+CL T++A FN + G + 
Sbjct: 95   ---GISESYLENLKRFLAAMEEMGLPRFELSDLEQGSMDAVLQCLQTLRAHFNFNIGGEN 151

Query: 678  ILTVNTGKNGNQQRKRWKY-EAESLDGNIGYLGEYSPRGENVVASGDERRKSLSESKFQR 854
            I         N  RK+W   E E L+G     G+ S  GE+     +ERR SL +SKFQ 
Sbjct: 152  IR--------NYSRKKWNLCEVECLEGFDRSQGDASSHGEHSDEFVEERRNSL-DSKFQH 202

Query: 855  VLRSPVMSEPSAALIHHVGHKFHEVFQLKQGRYSDLPAAKISEMLRSNSLDNAPTQSLLS 1034
            VLR  V SEP AA IHHVGH+F E FQLKQG Y+D PAAKISE++   SL+N PT  L S
Sbjct: 203  VLRRSVFSEPLAASIHHVGHRFQEGFQLKQGGYADFPAAKISELVEQKSLENTPTHLLFS 262

Query: 1035 VVNGILDESIDRKNG 1079
            ++  ILD SI+RKNG
Sbjct: 263  ILINILDGSIERKNG 277


>ref|XP_002318552.1| predicted protein [Populus trichocarpa] gi|222859225|gb|EEE96772.1|
            predicted protein [Populus trichocarpa]
          Length = 847

 Score =  215 bits (547), Expect = 2e-53
 Identities = 126/249 (50%), Positives = 162/249 (65%)
 Frame = +3

Query: 330  VGAKQRAELVEWLNDIVPNLSLPVEASDEEVRSCLLDGSVFCSILSRLNPTRSEDGTCDN 509
            + A QRA LVEW+N  VP+L+ PV+AS E++R+CL+DG+V   IL+RL P     G    
Sbjct: 37   IEANQRAILVEWMNSTVPSLNFPVKASSEQLRTCLIDGTVLLQILNRLRP-----GFSYK 91

Query: 510  SSESRLCTVKSFLAAVLEMGLPKFEVSDLEQGSMTKILECLWTVKAQFNPSFGEDTILTV 689
               SR   VK FLA + E+G+ KFE+SDLE GSM  +++CL T++AQF    G +   T 
Sbjct: 92   EGSSRSENVKKFLACMDELGILKFELSDLETGSMKNVMDCLSTLRAQF-AYLGGNLSPTS 150

Query: 690  NTGKNGNQQRKRWKYEAESLDGNIGYLGEYSPRGENVVASGDERRKSLSESKFQRVLRSP 869
               + G+ +            G+    G +SP        G+E+RK   ESK Q  L   
Sbjct: 151  GITRFGSPR------------GDASSNGHFSP------TFGEEKRKFSPESKSQHAL--- 189

Query: 870  VMSEPSAALIHHVGHKFHEVFQLKQGRYSDLPAAKISEMLRSNSLDNAPTQSLLSVVNGI 1049
               EPSAA +HHVGHKFHEVFQLKQGR+S+L AAKISEM++SNSLDN+PTQSLLSVVNGI
Sbjct: 190  ---EPSAASMHHVGHKFHEVFQLKQGRFSELSAAKISEMMKSNSLDNSPTQSLLSVVNGI 246

Query: 1050 LDESIDRKN 1076
            LDESI+RK+
Sbjct: 247  LDESIERKS 255


>emb|CAN65659.1| hypothetical protein VITISV_000953 [Vitis vinifera]
          Length = 1742

 Score =  213 bits (543), Expect = 5e-53
 Identities = 122/231 (52%), Positives = 156/231 (67%), Gaps = 2/231 (0%)
 Frame = +3

Query: 321  GSVVG-AKQRAELVEWLNDIVPNLSLPVEASDEEVRSCLLDGSVFCSILSRLNPTRSEDG 497
            G++ G   QR +LVEWLN I+P LSLP+EAS+E++R+CL+DG+V C IL+RL+P   E G
Sbjct: 24   GTIEGNXSQRTQLVEWLNGILPYLSLPLEASEEDLRACLIDGTVLCGILNRLSPGSIEMG 83

Query: 498  TCDNSSESRLCTVKSFLAAVLEMGLPKFEVSDLEQGSMTKILECLWTVKAQFNPSFGEDT 677
                 SES L  +K FLAA+ EMGLP+FE+SDLEQGSM  +L+CL T++A FN + G + 
Sbjct: 84   ---GISESHLENLKRFLAAMEEMGLPRFELSDLEQGSMDAVLQCLQTLRAHFNFNIGGEN 140

Query: 678  ILTVNTGKNGNQQRKRWKY-EAESLDGNIGYLGEYSPRGENVVASGDERRKSLSESKFQR 854
            I         N  RK+W   E E L+G     G+ S  GE+     +ERR SL +SKFQ 
Sbjct: 141  IR--------NYSRKKWNLCEVECLEGFDRSQGDASSHGEHSDEFVEERRNSL-DSKFQH 191

Query: 855  VLRSPVMSEPSAALIHHVGHKFHEVFQLKQGRYSDLPAAKISEMLRSNSLD 1007
            VLR  V SEP AA IHHVGH+F E FQLKQG Y+D PAAKISE++   SL+
Sbjct: 192  VLRRSVFSEPXAASIHHVGHRFQEGFQLKQGGYADFPAAKISELVEQKSLE 242


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