BLASTX nr result

ID: Coptis21_contig00018322 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018322
         (1491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545282.1| PREDICTED: uncharacterized protein LOC100805...   244   4e-62
ref|XP_002510369.1| conserved hypothetical protein [Ricinus comm...   237   7e-60
ref|XP_003549431.1| PREDICTED: uncharacterized protein LOC100813...   227   5e-57
ref|XP_002333972.1| predicted protein [Populus trichocarpa] gi|2...   216   1e-53
ref|XP_002301875.1| predicted protein [Populus trichocarpa] gi|2...   207   4e-51

>ref|XP_003545282.1| PREDICTED: uncharacterized protein LOC100805646 [Glycine max]
          Length = 1886

 Score =  244 bits (623), Expect = 4e-62
 Identities = 141/300 (47%), Positives = 183/300 (61%)
 Frame = -2

Query: 1478 TSLREIQKEQEHMSTSAQQIAPVQPPKKVHSNLRTRGTGAAQPLAGSSLTNGASPIKISG 1299
            TSLR+I KEQE   +SA  ++P+ PP+K      T  + +++ ++ SS +  ASPI+I+ 
Sbjct: 1592 TSLRDILKEQERKGSSAIPVSPMPPPQKSQPPQSTWSSASSRSISASSPSKAASPIQINS 1651

Query: 1298 LASAQSKSREEDDLFWGPHDQSTQKAMQSGFPSLVNSGSRGTKSIPVEGTLAGXXXXXXX 1119
             AS QSK + +DDLFWGP DQS Q   QSGFP LV+ GSRG+K++P++G   G       
Sbjct: 1652 QAS-QSKHKGDDDLFWGPMDQSKQDTKQSGFPQLVSQGSRGSKNVPLKGNSPGLLTRQKS 1710

Query: 1118 XXXXXXXXXXXXXTVAARSPPEGRKHNTTRLSEAKDFRDWCKKEIYRLTGSNDTSFLELC 939
                           +++S  + +K   TR SEA DFRDWC+ E  RL G+ DTSFLE C
Sbjct: 1711 VSGKPTERFLASSPASSQSVLKLKKDAMTRHSEATDFRDWCENECVRLIGTKDTSFLEFC 1770

Query: 938  LMQPTREAEMLLKENLGSCDPDHTFIDKVLDYKVLLPADVLELAFQSHDDPKTSKPGCGN 759
            L Q   EAEMLL ENLGS DPDH FIDK L+YK LLP+DVL++AFQS +D K +  G   
Sbjct: 1771 LKQSRSEAEMLLIENLGSYDPDHQFIDKFLNYKELLPSDVLDIAFQSRNDKKVTGYGVEG 1830

Query: 758  VDTNIVSDRDVDSAEVASHIGSXXXXXXXXXXXXKVSASLLGFNVVSNRILMGEIQAAEN 579
              +      DVD  E +S  G             KVS S+LGFNVVSNRI+MGEIQ+ E+
Sbjct: 1831 TASVSADILDVDYTEGSSKGGG----KKKGKKGKKVSPSVLGFNVVSNRIMMGEIQSVED 1886


>ref|XP_002510369.1| conserved hypothetical protein [Ricinus communis]
            gi|223551070|gb|EEF52556.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1798

 Score =  237 bits (604), Expect = 7e-60
 Identities = 136/301 (45%), Positives = 181/301 (60%), Gaps = 1/301 (0%)
 Frame = -2

Query: 1478 TSLREIQKEQEHMSTSAQQIAPVQPPKKVHSNLRTRGTGAAQPLAGSSLTNGASPIKISG 1299
            TSLR+IQKEQE   +S Q   P+  P+K   +     +GA+  L+ SS +  ASP++I+ 
Sbjct: 1498 TSLRDIQKEQEKKFSSVQPQNPISTPQKPQPSQVAHASGASWSLSASSPSKAASPMQINS 1557

Query: 1298 LASAQSKSREEDDLFWGPHDQSTQKAMQSGFPSLVNSGSRGTKSIPVEGTLAGXXXXXXX 1119
             ++ QSK + +DDLFWGP DQS Q+  QS FP LV+ GS G K+ PV+G+ +G       
Sbjct: 1558 HSALQSKYKGDDDLFWGPVDQSKQETKQSEFPHLVSQGSWGAKNTPVKGSPSGSINRQKS 1617

Query: 1118 XXXXXXXXXXXXXTVAARSPPEGRKHNTTRLSEAKDFRDWCKKEIYRLTGSNDTSFLELC 939
                           +A+S  +G++    + SEA DFRDWC+ E  RLTG+ DTS LE C
Sbjct: 1618 IGGRQAERTLSSSPASAQSSLKGKRDAMNKHSEAMDFRDWCESECVRLTGTRDTSVLEFC 1677

Query: 938  LMQPTREAEMLLKENLGSCDPDHTFIDKVLDYKVLLPADVLELAFQSHDDPKTSKPGCGN 759
            L Q   EAE+LLKENLG  DPD  FIDK L+YK LLPADVLE+AFQS +D   +  G  +
Sbjct: 1678 LKQSRSEAELLLKENLGPNDPDDEFIDKFLNYKELLPADVLEIAFQSRNDRMATGLGARD 1737

Query: 758  VDTNIVSDRDVDSAEVASHIG-SXXXXXXXXXXXXKVSASLLGFNVVSNRILMGEIQAAE 582
            ++++ V  RD D    A   G S            KVS ++LGF+VVSNRI+MGEIQ  E
Sbjct: 1738 MNSDNVGSRDFDHDFAAGADGSSKGGGKKKGKKGKKVSPAVLGFSVVSNRIMMGEIQTVE 1797

Query: 581  N 579
            +
Sbjct: 1798 D 1798


>ref|XP_003549431.1| PREDICTED: uncharacterized protein LOC100813188 [Glycine max]
          Length = 1781

 Score =  227 bits (579), Expect = 5e-57
 Identities = 138/303 (45%), Positives = 180/303 (59%), Gaps = 3/303 (0%)
 Frame = -2

Query: 1478 TSLREIQKEQEHMSTSAQQI--APVQPPKKVHSNLRTRGTGAAQPLAGSSLTNGASPIKI 1305
            TSLR+I KEQE   +SA  +  +P+ PP+K      T  T +++ ++ SS +  ASPI+I
Sbjct: 1483 TSLRDILKEQERKGSSALPVTVSPMPPPQKSQPPQSTWSTVSSRSISASSPSKNASPIQI 1542

Query: 1304 SGLASAQSKSREEDDLFWGPHDQSTQKAMQSGFPSLVNSGSRGTKSIPVEGTLAGXXXXX 1125
            +  AS QSK + +DDLFWGP +QS Q   QS FP L + GS G+K+ P++G   G     
Sbjct: 1543 NSQAS-QSKYKGDDDLFWGPIEQSKQDTKQSDFPQLASQGSWGSKNGPLKGNSPGLLTRQ 1601

Query: 1124 XXXXXXXXXXXXXXXTVAARSPPEGRKHNTTRLSEAKDFRDWCKKEIYRLTGSNDTSFLE 945
                             +++S  + +K   TR SEA DFRDWC+ E  RL G+ DTSFLE
Sbjct: 1602 KSVSGKPTERSLASSPASSQSVLKLKKDAMTRHSEAMDFRDWCENECVRLIGTKDTSFLE 1661

Query: 944  LCLMQPTREAEMLLKENLGSCDPDHTFIDKVLDYKVLLPADVLELAFQ-SHDDPKTSKPG 768
             CL Q   EAEMLL ENLGS DPDH FIDK L+YK LLP+DVL++AFQ S +D K ++ G
Sbjct: 1662 FCLKQSRSEAEMLLIENLGSYDPDHEFIDKFLNYKELLPSDVLDIAFQSSRNDKKVTRHG 1721

Query: 767  CGNVDTNIVSDRDVDSAEVASHIGSXXXXXXXXXXXXKVSASLLGFNVVSNRILMGEIQA 588
                 +     +DVD  E  S  G             KVS S+LGFNVVSNRI+MGEIQ+
Sbjct: 1722 AAGTASANADIQDVDYTEGGSSKGG---GKKKGKKGKKVSPSVLGFNVVSNRIMMGEIQS 1778

Query: 587  AEN 579
             E+
Sbjct: 1779 VED 1781


>ref|XP_002333972.1| predicted protein [Populus trichocarpa] gi|222839392|gb|EEE77729.1|
            predicted protein [Populus trichocarpa]
          Length = 885

 Score =  216 bits (550), Expect = 1e-53
 Identities = 131/300 (43%), Positives = 171/300 (57%)
 Frame = -2

Query: 1478 TSLREIQKEQEHMSTSAQQIAPVQPPKKVHSNLRTRGTGAAQPLAGSSLTNGASPIKISG 1299
            TSLR+IQKEQE   +SAQ    +  P+K        G+G++   + SS +  ASPI+I+ 
Sbjct: 590  TSLRDIQKEQEKKVSSAQPQNQIPIPQKPQPAQSAHGSGSSWSHSASSPSKAASPIQINS 649

Query: 1298 LASAQSKSREEDDLFWGPHDQSTQKAMQSGFPSLVNSGSRGTKSIPVEGTLAGXXXXXXX 1119
             AS+QSK + +D+LFWGP DQS Q+  QS FP + + GS GTK+ PV+G           
Sbjct: 650  RASSQSKYKGDDELFWGPIDQSKQEPKQSEFPHISSQGSWGTKNTPVKGAPVASLGRQKS 709

Query: 1118 XXXXXXXXXXXXXTVAARSPPEGRKHNTTRLSEAKDFRDWCKKEIYRLTGSNDTSFLELC 939
                         T   +S  +G++    + SEA +FR WC+ E  RL G+ DTSFLE C
Sbjct: 710  VGGRPAEHSLSSSTATTQSSLKGKRDTMNKHSEAMEFRAWCENECVRLVGTKDTSFLEYC 769

Query: 938  LMQPTREAEMLLKENLGSCDPDHTFIDKVLDYKVLLPADVLELAFQSHDDPKTSKPGCGN 759
            L Q   EAEMLL ENL S DPDH FIDK L+ K +L ADVLE+AFQ  +D KTS     +
Sbjct: 770  LKQSRSEAEMLLIENLASFDPDHEFIDKFLNCKEMLGADVLEIAFQRQNDWKTSGISAKD 829

Query: 758  VDTNIVSDRDVDSAEVASHIGSXXXXXXXXXXXXKVSASLLGFNVVSNRILMGEIQAAEN 579
            V  +     D D  + +   GS            KV+ S+LGFNVVSNRI+MGEIQ  E+
Sbjct: 830  VTFDNAGVEDYDREDGSGKGGS----KKKGKKGKKVNPSVLGFNVVSNRIMMGEIQTLED 885


>ref|XP_002301875.1| predicted protein [Populus trichocarpa] gi|222843601|gb|EEE81148.1|
            predicted protein [Populus trichocarpa]
          Length = 1846

 Score =  207 bits (528), Expect = 4e-51
 Identities = 131/311 (42%), Positives = 171/311 (54%), Gaps = 11/311 (3%)
 Frame = -2

Query: 1478 TSLREIQKEQEHMSTSAQQIAPVQPPKKVHSNLRTRGTGAAQPLAGSSLTNGASPIKISG 1299
            TSLR+IQKEQE   +SAQ    +  P+K        G+G++   + SS +  ASPI+I+ 
Sbjct: 1540 TSLRDIQKEQEKKVSSAQPQNQIPIPQKPQPAQSAHGSGSSWSHSASSPSKAASPIQINS 1599

Query: 1298 LASAQSKSREEDDLFWGPHDQSTQKAMQSGFPSLVNSGSRGTKSIPVEGTLAGXXXXXXX 1119
             AS+QSK + +D+LFWGP DQS Q+  QS FP + + GS GTK+ PV+G           
Sbjct: 1600 RASSQSKYKGDDELFWGPIDQSKQEPKQSEFPHISSQGSWGTKNTPVKGAPVASLGRQKS 1659

Query: 1118 XXXXXXXXXXXXXTVAARSPPEGRKHNTTRLSEAKDFRDWCKKEIYRLTGSN-------- 963
                         T   +S  +G++    + SEA +FR WC+ E  RL G+         
Sbjct: 1660 VGGRPAEHSLSSSTATTQSSLKGKRDTMNKHSEAMEFRAWCENECVRLVGTKVLSDAMES 1719

Query: 962  ---DTSFLELCLMQPTREAEMLLKENLGSCDPDHTFIDKVLDYKVLLPADVLELAFQSHD 792
               DTSFLE CL Q   EAEMLL ENL S DPDH FIDK L+ K +L ADVLE+AFQ  +
Sbjct: 1720 LVIDTSFLEYCLKQSRSEAEMLLIENLASFDPDHEFIDKFLNCKEMLGADVLEIAFQRQN 1779

Query: 791  DPKTSKPGCGNVDTNIVSDRDVDSAEVASHIGSXXXXXXXXXXXXKVSASLLGFNVVSNR 612
            D KTS     +V  +     D D  + +   GS            KV+ S+LGFNVVSNR
Sbjct: 1780 DWKTSGISAKDVTFDNAGVEDYDREDGSGKGGS----KKKGKKGKKVNPSVLGFNVVSNR 1835

Query: 611  ILMGEIQAAEN 579
            I+MGEIQ  E+
Sbjct: 1836 IMMGEIQTLED 1846


Top