BLASTX nr result

ID: Coptis21_contig00018313 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018313
         (1465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135099.1| PREDICTED: dihydrolipoyllysine-residue acety...   486   e-135
ref|XP_002282287.1| PREDICTED: dihydrolipoyllysine-residue acety...   482   e-133
ref|XP_002315946.1| predicted protein [Populus trichocarpa] gi|2...   473   e-131
ref|XP_003555893.1| PREDICTED: dihydrolipoyllysine-residue acety...   471   e-130
ref|XP_002875287.1| hypothetical protein ARALYDRAFT_904762 [Arab...   461   e-127

>ref|XP_004135099.1| PREDICTED: dihydrolipoyllysine-residue acetyltransferase component of
            pyruvate dehydrogenase complex-like [Cucumis sativus]
            gi|449523744|ref|XP_004168883.1| PREDICTED:
            dihydrolipoyllysine-residue acetyltransferase component
            of pyruvate dehydrogenase complex-like [Cucumis sativus]
          Length = 487

 Score =  486 bits (1252), Expect = e-135
 Identities = 273/398 (68%), Positives = 285/398 (71%), Gaps = 14/398 (3%)
 Frame = -1

Query: 1465 VVVESDKADMDVETFYDGILAAIVVAEGETAPVGAPIGLLXXXXXXXXXXXXXXXXXXXX 1286
            VVVESDKADMDVETFYDGILAAIVV EGETAPVGAPIGLL                    
Sbjct: 91   VVVESDKADMDVETFYDGILAAIVVGEGETAPVGAPIGLLAETEEEVAEAKAKAASKSTS 150

Query: 1285 XXXXXXXXXXXXXXXXXXXXXS---------NEPKKIVATPFAKKLAKQHKVDIKTVNGT 1133
                                           + PKKIVATP AKKLAKQHKVDI +V GT
Sbjct: 151  APAAPAAAVSPSPPPPSSSPAPAISQSSPPSDGPKKIVATPQAKKLAKQHKVDIGSVTGT 210

Query: 1132 GPFGRITPEDVEAAAGITSKKTSSVSNVXXXXXXXXXXXXXXXXXXXP-----IPGATIV 968
            GPFGRITP DVEAAAGI   K + VSNV                         +PG+T+V
Sbjct: 211  GPFGRITPADVEAAAGIAPSKPA-VSNVASPVAAEAAAVPSKASAAPSNLPPPVPGSTVV 269

Query: 967  PFTTMQSAVSKNMIESLSVPAFRVGYPVMTDALDALYEKVKPKGVTMTXXXXXXXXXXXA 788
            PFTTMQ+AVSKNM+ESLSVP FRVGYPV TDALDALYEKVKPKGVTMT           A
Sbjct: 270  PFTTMQAAVSKNMVESLSVPTFRVGYPVSTDALDALYEKVKPKGVTMTALLAKAAAMALA 329

Query: 787  QHPVVNASCKDGKSFTYXXXXXXXXXXXXNGGLITPVLQDADKLDLYLLSQKWKELVEKA 608
            QHPVVNASCKDGKSFTY            NGGLITPVLQDADKLDLYLLSQKWKELVEKA
Sbjct: 330  QHPVVNASCKDGKSFTYNSNINIAVAVAINGGLITPVLQDADKLDLYLLSQKWKELVEKA 389

Query: 607  RSKQLQPHEYNSGTFTLSNLGMFGVDRFDAILPPGQGAIMAVGASKPTVVTGADGFFSVK 428
            RSKQLQPHEYNSGTFTLSNLGMFGVD+FDAILPPGQGAIMAVGASKPTVVT ADGFFSVK
Sbjct: 390  RSKQLQPHEYNSGTFTLSNLGMFGVDKFDAILPPGQGAIMAVGASKPTVVTDADGFFSVK 449

Query: 427  SKMLVNVTADHRIVYGADLASFLQTFAKIIQNPESLTL 314
            SKMLVNVTADHRIVYGADLA+FLQTFAKI++NPESLTL
Sbjct: 450  SKMLVNVTADHRIVYGADLAAFLQTFAKIVENPESLTL 487


>ref|XP_002282287.1| PREDICTED: dihydrolipoyllysine-residue acetyltransferase component of
            pyruvate dehydrogenase complex, mitochondrial-like [Vitis
            vinifera]
          Length = 488

 Score =  482 bits (1240), Expect = e-133
 Identities = 267/401 (66%), Positives = 285/401 (71%), Gaps = 17/401 (4%)
 Frame = -1

Query: 1465 VVVESDKADMDVETFYDGILAAIVVAEGETAPVGAPIGLLXXXXXXXXXXXXXXXXXXXX 1286
            VVVESDKADMDVETFYDGILAAIVV +GE APVGAPIGLL                    
Sbjct: 88   VVVESDKADMDVETFYDGILAAIVVGDGEVAPVGAPIGLLAETEEEIAEAKAKASKSGSS 147

Query: 1285 XXXXXXXXXXXXXXXXXXXXXSNE----------PKKIVATPFAKKLAKQHKVDIKTVNG 1136
                                   +          PKKIVATPFAKKLAKQHKVDI +V G
Sbjct: 148  APPPPPAPAAASASPAAPAVAPPKSAASAAVPDGPKKIVATPFAKKLAKQHKVDIGSVVG 207

Query: 1135 TGPFGRITPEDVEAAAGITSKKTSSVSNVXXXXXXXXXXXXXXXXXXXP-------IPGA 977
            TGPFGRITP DVEAAAGI+  K++ V+ V                           IPG+
Sbjct: 208  TGPFGRITPADVEAAAGISPSKSTGVNVVSSVAAAPAPAPVAAAAPKAAASPAPPPIPGS 267

Query: 976  TIVPFTTMQSAVSKNMIESLSVPAFRVGYPVMTDALDALYEKVKPKGVTMTXXXXXXXXX 797
            T+VPFTTMQ+AVSKNM+ESLSVP FRVGYPV+TD LDALYEKVKPKGVTMT         
Sbjct: 268  TVVPFTTMQAAVSKNMVESLSVPTFRVGYPVLTDKLDALYEKVKPKGVTMTALLAKAAAM 327

Query: 796  XXAQHPVVNASCKDGKSFTYXXXXXXXXXXXXNGGLITPVLQDADKLDLYLLSQKWKELV 617
              AQHPVVNASCKDGK+FTY            NGGLITPVLQDADKLDLYLLSQKWKELV
Sbjct: 328  ALAQHPVVNASCKDGKTFTYNSSINIAVAVAINGGLITPVLQDADKLDLYLLSQKWKELV 387

Query: 616  EKARSKQLQPHEYNSGTFTLSNLGMFGVDRFDAILPPGQGAIMAVGASKPTVVTGADGFF 437
            EKAR+KQLQPHEYNSGTFTLSNLGMFGVDRFDAILPPGQGAIMAVGASKPTVVT  DGFF
Sbjct: 388  EKARAKQLQPHEYNSGTFTLSNLGMFGVDRFDAILPPGQGAIMAVGASKPTVVTDKDGFF 447

Query: 436  SVKSKMLVNVTADHRIVYGADLASFLQTFAKIIQNPESLTL 314
            SVKSKMLVNVTADHRI+YGADLA+FLQTFAKI++NPESLTL
Sbjct: 448  SVKSKMLVNVTADHRIIYGADLAAFLQTFAKIVENPESLTL 488


>ref|XP_002315946.1| predicted protein [Populus trichocarpa] gi|222864986|gb|EEF02117.1|
            predicted protein [Populus trichocarpa]
          Length = 435

 Score =  473 bits (1218), Expect = e-131
 Identities = 262/392 (66%), Positives = 277/392 (70%), Gaps = 8/392 (2%)
 Frame = -1

Query: 1465 VVVESDKADMDVETFYDGILAAIVVAEGETAPVGAPIGLLXXXXXXXXXXXXXXXXXXXX 1286
            VVVESDKADMDVETFYDGILAAIVV EGETAPVGAPIGLL                    
Sbjct: 45   VVVESDKADMDVETFYDGILAAIVVPEGETAPVGAPIGLLAETEEEIAEAKAKAASKAGG 104

Query: 1285 XXXXXXXXXXXXXXXXXXXXXS--------NEPKKIVATPFAKKLAKQHKVDIKTVNGTG 1130
                                            P+K VATPFAKKLA+QHKVDI  V GTG
Sbjct: 105  SSSPATPISPPDSSTPAPAIPQPPPAPAAPEGPRKTVATPFAKKLARQHKVDINKVVGTG 164

Query: 1129 PFGRITPEDVEAAAGITSKKTSSVSNVXXXXXXXXXXXXXXXXXXXPIPGATIVPFTTMQ 950
            P+GRITP DVEAAAGI   K S VS+                    P+PG+ +VPFT+MQ
Sbjct: 165  PYGRITPADVEAAAGIAVSKPS-VSSASPAAAAAPVMAAASSSAPPPLPGSNVVPFTSMQ 223

Query: 949  SAVSKNMIESLSVPAFRVGYPVMTDALDALYEKVKPKGVTMTXXXXXXXXXXXAQHPVVN 770
             AVSKNM+ESLSVP FRVGYP+ TDALDALYEKVKPKGVTMT            QHPVVN
Sbjct: 224  GAVSKNMVESLSVPTFRVGYPITTDALDALYEKVKPKGVTMTALLAKAAAMALVQHPVVN 283

Query: 769  ASCKDGKSFTYXXXXXXXXXXXXNGGLITPVLQDADKLDLYLLSQKWKELVEKARSKQLQ 590
            ASCKDGKSFTY            NGGLITPVLQDADKLDLYLLS+KWKELVEKAR+KQLQ
Sbjct: 284  ASCKDGKSFTYNSNINIAVAVAINGGLITPVLQDADKLDLYLLSKKWKELVEKARAKQLQ 343

Query: 589  PHEYNSGTFTLSNLGMFGVDRFDAILPPGQGAIMAVGASKPTVVTGADGFFSVKSKMLVN 410
            P EYNSGTFTLSNLGMFGVDRFDAILPPGQGAIMAVGASKPTVV   DGFFSVKSKMLVN
Sbjct: 344  PQEYNSGTFTLSNLGMFGVDRFDAILPPGQGAIMAVGASKPTVVADKDGFFSVKSKMLVN 403

Query: 409  VTADHRIVYGADLASFLQTFAKIIQNPESLTL 314
            VTADHRIVYGADLA+FLQTFAKI++NPESLTL
Sbjct: 404  VTADHRIVYGADLAAFLQTFAKIVENPESLTL 435


>ref|XP_003555893.1| PREDICTED: dihydrolipoyllysine-residue acetyltransferase component of
            pyruvate dehydrogenase complex-like [Glycine max]
          Length = 472

 Score =  471 bits (1212), Expect = e-130
 Identities = 261/391 (66%), Positives = 279/391 (71%), Gaps = 7/391 (1%)
 Frame = -1

Query: 1465 VVVESDKADMDVETFYDGILAAIVVAEGETAPVGAPIGLLXXXXXXXXXXXXXXXXXXXX 1286
            VVVESDKADMDVETFYDGILAAIVVA+GETAPVGAPIGLL                    
Sbjct: 82   VVVESDKADMDVETFYDGILAAIVVADGETAPVGAPIGLLADSPEEVAEAKAKAAKSVPS 141

Query: 1285 XXXXXXXXXXXXXXXXXXXXXSNE-----PKKIVATPFAKKLAKQHKVDIKTVNGTGPFG 1121
                                   +     P KIVATP AKKLAKQHKVDI TV GTGPFG
Sbjct: 142  GSPAPASPSDPSPATPPPPPPPAKSVSEGPAKIVATPQAKKLAKQHKVDIATVAGTGPFG 201

Query: 1120 RITPEDVEAAAGITSKK--TSSVSNVXXXXXXXXXXXXXXXXXXXPIPGATIVPFTTMQS 947
            RITP DVEAAAGI   K   +  +                     PIPG+++VPFTTMQS
Sbjct: 202  RITPADVEAAAGIAPSKRNVAPAAIPAPATPAPPSKAASGSAAPAPIPGSSVVPFTTMQS 261

Query: 946  AVSKNMIESLSVPAFRVGYPVMTDALDALYEKVKPKGVTMTXXXXXXXXXXXAQHPVVNA 767
            AV+KNM+ESLSVP FRVGYPV TDALDALYEKVKPKGVTMT            QHPVVNA
Sbjct: 262  AVAKNMMESLSVPTFRVGYPVTTDALDALYEKVKPKGVTMTAILAKAAAMALVQHPVVNA 321

Query: 766  SCKDGKSFTYXXXXXXXXXXXXNGGLITPVLQDADKLDLYLLSQKWKELVEKARSKQLQP 587
            +CKDGK+F Y            NGGLITPVLQDADKLDLYLLSQKWKELVEKAR+KQLQP
Sbjct: 322  TCKDGKNFVYNGNINVAVAVAINGGLITPVLQDADKLDLYLLSQKWKELVEKARAKQLQP 381

Query: 586  HEYNSGTFTLSNLGMFGVDRFDAILPPGQGAIMAVGASKPTVVTGADGFFSVKSKMLVNV 407
            HEYNSGTFTLSNLGMFGVDRFDAILPPGQGAIMAVGASKPTV+   DGFFSVK+KMLVNV
Sbjct: 382  HEYNSGTFTLSNLGMFGVDRFDAILPPGQGAIMAVGASKPTVLADKDGFFSVKNKMLVNV 441

Query: 406  TADHRIVYGADLASFLQTFAKIIQNPESLTL 314
            TADHRI+YGADLA+FLQTF+KII+NPESLTL
Sbjct: 442  TADHRIIYGADLAAFLQTFSKIIENPESLTL 472


>ref|XP_002875287.1| hypothetical protein ARALYDRAFT_904762 [Arabidopsis lyrata subsp.
            lyrata] gi|297321125|gb|EFH51546.1| hypothetical protein
            ARALYDRAFT_904762 [Arabidopsis lyrata subsp. lyrata]
          Length = 482

 Score =  461 bits (1186), Expect = e-127
 Identities = 257/393 (65%), Positives = 271/393 (68%), Gaps = 9/393 (2%)
 Frame = -1

Query: 1465 VVVESDKADMDVETFYDGILAAIVVAEGETAPVGAPIGLLXXXXXXXXXXXXXXXXXXXX 1286
            VVVESDKADMDVETFYDG LAAIVV EGETAPVG  IGLL                    
Sbjct: 90   VVVESDKADMDVETFYDGYLAAIVVGEGETAPVGTAIGLLAETEAEIEEAKTKAASKSSS 149

Query: 1285 XXXXXXXXXXXXXXXXXXXXXSNE---------PKKIVATPFAKKLAKQHKVDIKTVNGT 1133
                                 +           P+K VATP+AKKLAKQHKVDI ++ GT
Sbjct: 150  SVVEAVVPSPPPVTSSPAPAIAQPAPVTAVADGPRKTVATPYAKKLAKQHKVDIGSIAGT 209

Query: 1132 GPFGRITPEDVEAAAGITSKKTSSVSNVXXXXXXXXXXXXXXXXXXXPIPGATIVPFTTM 953
            GPFGRIT  DVE AAGI   K+S                         +P ++IVPFT M
Sbjct: 210  GPFGRITASDVETAAGIAPSKSSVAQPPPPPTPVAAKATTTTTNLPPLLPDSSIVPFTAM 269

Query: 952  QSAVSKNMIESLSVPAFRVGYPVMTDALDALYEKVKPKGVTMTXXXXXXXXXXXAQHPVV 773
            QSAVSKNMIESLSVP FRVGYPV TDALDALYEKVKPKGVTMT           AQHPVV
Sbjct: 270  QSAVSKNMIESLSVPTFRVGYPVNTDALDALYEKVKPKGVTMTALLAKAAGMALAQHPVV 329

Query: 772  NASCKDGKSFTYXXXXXXXXXXXXNGGLITPVLQDADKLDLYLLSQKWKELVEKARSKQL 593
            NASCKDGKSF+Y            NGGLITPVLQDADKLDLYLLSQKWKELV KARSKQL
Sbjct: 330  NASCKDGKSFSYNANINIAVAVAINGGLITPVLQDADKLDLYLLSQKWKELVGKARSKQL 389

Query: 592  QPHEYNSGTFTLSNLGMFGVDRFDAILPPGQGAIMAVGASKPTVVTGADGFFSVKSKMLV 413
            QPHEYNSGTFTLSNLGMFGVDRFDAILPPGQGAIMAVGASKPTVV   DGFFSVK+ MLV
Sbjct: 390  QPHEYNSGTFTLSNLGMFGVDRFDAILPPGQGAIMAVGASKPTVVADKDGFFSVKNTMLV 449

Query: 412  NVTADHRIVYGADLASFLQTFAKIIQNPESLTL 314
            NVTADHRIVYGADLA+FLQTFAKII+NP+SLTL
Sbjct: 450  NVTADHRIVYGADLAAFLQTFAKIIENPDSLTL 482


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