BLASTX nr result

ID: Coptis21_contig00018306 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018306
         (550 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309557.1| predicted protein [Populus trichocarpa] gi|2...    82   6e-14
ref|XP_002324814.1| predicted protein [Populus trichocarpa] gi|2...    78   1e-12
emb|CAN66912.1| hypothetical protein VITISV_007259 [Vitis vinifera]    73   3e-11
ref|XP_002281528.2| PREDICTED: myb-related protein 3R-1-like [Vi...    70   3e-10
ref|XP_003522693.1| PREDICTED: myb-related protein 3R-1-like [Gl...    64   2e-08

>ref|XP_002309557.1| predicted protein [Populus trichocarpa] gi|222855533|gb|EEE93080.1|
            predicted protein [Populus trichocarpa]
          Length = 1027

 Score = 82.0 bits (201), Expect = 6e-14
 Identities = 66/180 (36%), Positives = 93/180 (51%), Gaps = 6/180 (3%)
 Frame = -2

Query: 534  STGIRSDFSSLDAIFDEIGTCAASVSSIEGTLLSPSYQQKKKFGASIHDKENYD--HSGT 361
            ++ +  DFS LD +FDE  T   S      +LLSPS  Q+K   +S  DKEN D    G 
Sbjct: 679  ASNLSKDFSRLDVMFDESETRNRS------SLLSPSSDQEKNHESSGEDKENLDPAREGA 732

Query: 360  MSTEGNTSETAVDSVIPRDKMKQECNDVDAIAKIAENAATPTVQRSSVVLIEQDVNALRF 181
                GN+           D +KQ   D DA +K   +A   TV++SS V +E++ + L  
Sbjct: 733  EENTGNSE----------DNVKQGVGDSDARSKAHPDAGAQTVKQSSEVPVEENSDDL-L 781

Query: 180  FSPDRDGYPTNRTLSVGARTPRDQLREI-TLCRSGPSCSESSTGT--VLISPR-NTEKKH 13
            FSP++ G+  +RT    ARTPR+  R+I +      S SESS+G   ++ISP    EK H
Sbjct: 782  FSPNQLGFKADRTFGPSARTPRNFYRKILSTLSEQASASESSSGNPCIIISPTVCMEKNH 841


>ref|XP_002324814.1| predicted protein [Populus trichocarpa] gi|222866248|gb|EEF03379.1|
            predicted protein [Populus trichocarpa]
          Length = 1027

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 67/180 (37%), Positives = 93/180 (51%), Gaps = 6/180 (3%)
 Frame = -2

Query: 534  STGIRSDFSSLDAIFDEIGTCAASVSSIEGTLLSPSYQQKKKFGASIHDKENYDHS--GT 361
            ++ +  DFS LD +FDE  T   S      +LL PS  Q+K   +S  DKEN D +  G 
Sbjct: 683  ASNLSKDFSCLDVMFDESETHNRS------SLLPPSSNQEKNHESSGEDKENLDPALEGA 736

Query: 360  MSTEGNTSETAVDSVIPRDKMKQECNDVDAIAKIAENAATPTVQRSSVVLIEQDVNALRF 181
                 NT          +D +KQ   D DA +K+  +A+   VQ+SS VL E++ N L  
Sbjct: 737  GEFCSNT----------KDNVKQGTGDSDARSKVHSDAS---VQQSSGVLSEENTNHL-L 782

Query: 180  FSPDRDGYPTNRTLSVGARTPRDQLREI--TLCRSGPSCSESSTGT--VLISPRNTEKKH 13
            FSPD+ G+  +R     ARTPR+  R+I  TL     S SESS G   ++ SP + +K H
Sbjct: 783  FSPDQLGFKADRAFGPSARTPRNLYRKILGTLSEQA-SGSESSFGNPCMIFSPTSCKKNH 841


>emb|CAN66912.1| hypothetical protein VITISV_007259 [Vitis vinifera]
          Length = 995

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 65/192 (33%), Positives = 89/192 (46%), Gaps = 13/192 (6%)
 Frame = -2

Query: 549  GFYCTSTGIRSDFSSLDAIFDEIGTCAASVSSIEGTLLSPSYQQKKKFGASIHDKENYDH 370
            G YCT++  R DFS LD +  E G  A+ VS        P   QKK     + DKEN   
Sbjct: 710  GLYCTNSLTR-DFSCLDLMLGENGDKASFVS--------PKNIQKKNSRXRMEDKENLSC 760

Query: 369  SGTMSTEGNTSETAVDSVIP---------RDKMKQECNDVDAIAKIAENAATPTVQRSSV 217
            +     E        +  IP          DK+++  N + A AK+  +AA   V++SS 
Sbjct: 761  APERKKEWRNDAALSNHAIPGMNFDRSCPSDKIEKSSNVLAAEAKVDADAAVKVVKQSSG 820

Query: 216  VLIEQDVNALRFFSPDRDGYPTNRTLSVGARTPRD----QLREITLCRSGPSCSESSTGT 49
            +L+E D N L  FSPDR  +  NR L   ARTP      QL EI         S +S+ +
Sbjct: 821  ILVE-DKNDLSSFSPDRVVHKMNRVLCPSARTPESPNSRQLEEIV---HSEFLSGNSSFS 876

Query: 48   VLISPRNTEKKH 13
            V++SP    KK+
Sbjct: 877  VIVSPTAHGKKN 888


>ref|XP_002281528.2| PREDICTED: myb-related protein 3R-1-like [Vitis vinifera]
          Length = 1051

 Score = 69.7 bits (169), Expect = 3e-10
 Identities = 61/184 (33%), Positives = 81/184 (44%), Gaps = 13/184 (7%)
 Frame = -2

Query: 549  GFYCTSTGIRSDFSSLDAIFDEIGTCAASVSSIEGTLLSPSYQQKKKFGASIHDKENYDH 370
            GF+CTS+ +  +FS LD +FD  GT                  QK   G    DKEN  H
Sbjct: 691  GFFCTSS-LTKEFSRLDVMFDNSGT-----------------NQKSNSGPFDEDKENLGH 732

Query: 369  ----------SGTMSTEGNTSETAVDSVIPRDKMKQECNDVDAIAKIAENAATPTVQRSS 220
                       G  S+    SE   D     D ++Q   DVDA  K   +A    VQ  S
Sbjct: 733  VFVVGKEERRDGPPSSHNRNSEVDFDGRNSLDNIRQGNVDVDAKTKFDADA---DVQIPS 789

Query: 219  VVLIEQDVNALRFFSPDRDGYPTNRTLSVGARTPRDQLR---EITLCRSGPSCSESSTGT 49
             VL+EQ++N    FSPD+ G+ T++T     R   +Q     E TL +  P  SESS+G 
Sbjct: 790  GVLVEQNMNHQVLFSPDQVGFKTDKTFGSSRRNRGNQFSRSLEATLKQHAP--SESSSGN 847

Query: 48   VLIS 37
              +S
Sbjct: 848  PCLS 851


>ref|XP_003522693.1| PREDICTED: myb-related protein 3R-1-like [Glycine max]
          Length = 998

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 53/166 (31%), Positives = 81/166 (48%), Gaps = 19/166 (11%)
 Frame = -2

Query: 537  TSTGIRSDFSSLDAIFDEIGTCAASV------------SSIEGT-------LLSPSYQQK 415
            TST I++ FS LD +FD+  T  A +            +S+EG        L+     + 
Sbjct: 645  TSTLIKN-FSRLDVMFDDNETPVADLLPASSMQKRDSGTSVEGDKGSCRQDLVKVERAED 703

Query: 414  KKFGASIHDKENYDHSGTMSTEGNTSETAVDSVIPRDKMKQECNDVDAIAKIAENAATPT 235
            KK    + DK++ D SG     GN S+         DK+KQ+  DVD+  K   +AA   
Sbjct: 704  KKKSVILDDKKSEDDSG-----GNNSQ---------DKVKQQPLDVDSEIKNDASAAAEI 749

Query: 234  VQRSSVVLIEQDVNALRFFSPDRDGYPTNRTLSVGARTPRDQLREI 97
            VQ+ S +L+E D+N L  +SPD+    + + LS+ ART ++    I
Sbjct: 750  VQQPSEILVEHDMNDLLLYSPDQVNLKSEKVLSLSARTKKNPCSRI 795


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