BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018287
         (517 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27814.3| unnamed protein product [Vitis vinifera]              273   1e-71
ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containi...   273   1e-71
gb|ADE77588.1| unknown [Picea sitchensis]                             209   2e-52
gb|ADE77505.1| unknown [Picea sitchensis]                             207   9e-52
gb|ABR17838.1| unknown [Picea sitchensis]                             206   1e-51

>emb|CBI27814.3| unnamed protein product [Vitis vinifera]
          Length = 555

 Score =  273 bits (698), Expect = 1e-71
 Identities = 129/171 (75%), Positives = 146/171 (85%)
 Frame = -2

Query: 513 RSVISWTAMIGACAAHGHGEDALELFSDMLKGGVRPNIFTFTAVLTACKHSGLINEGRKH 334
           RSV+SWT+MIGACA+HGHGEDAL+LFS M   GV+PN FTF AV TAC+HSGL+ EGRKH
Sbjct: 352 RSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTACRHSGLVEEGRKH 411

Query: 333 FESMTRDYKIVPGVEQCACLVDLLGRAGQLSEAYEFVKRMPVKPDVGVWGALLGACRIHG 154
           FESM RDY I+PGVE CAC+VDLLGRAG L EAYEF+ +MPV+PDV VWGALLG+CRIH 
Sbjct: 412 FESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWGALLGSCRIHS 471

Query: 153 NLDLAELVAEHLFKLDSQNVTCYVLMLNIYAEASRWDDVAKLRKLMGEKEL 1
           NL+LAELVAE LF LD Q VT YVLM NIYAEA RW+D A+LRKLM E+EL
Sbjct: 472 NLELAELVAEKLFLLDPQTVTFYVLMSNIYAEAGRWEDAARLRKLMEEREL 522


>ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
           [Vitis vinifera]
          Length = 597

 Score =  273 bits (698), Expect = 1e-71
 Identities = 129/171 (75%), Positives = 146/171 (85%)
 Frame = -2

Query: 513 RSVISWTAMIGACAAHGHGEDALELFSDMLKGGVRPNIFTFTAVLTACKHSGLINEGRKH 334
           RSV+SWT+MIGACA+HGHGEDAL+LFS M   GV+PN FTF AV TAC+HSGL+ EGRKH
Sbjct: 394 RSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTACRHSGLVEEGRKH 453

Query: 333 FESMTRDYKIVPGVEQCACLVDLLGRAGQLSEAYEFVKRMPVKPDVGVWGALLGACRIHG 154
           FESM RDY I+PGVE CAC+VDLLGRAG L EAYEF+ +MPV+PDV VWGALLG+CRIH 
Sbjct: 454 FESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWGALLGSCRIHS 513

Query: 153 NLDLAELVAEHLFKLDSQNVTCYVLMLNIYAEASRWDDVAKLRKLMGEKEL 1
           NL+LAELVAE LF LD Q VT YVLM NIYAEA RW+D A+LRKLM E+EL
Sbjct: 514 NLELAELVAEKLFLLDPQTVTFYVLMSNIYAEAGRWEDAARLRKLMEEREL 564



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 37/121 (30%), Positives = 63/121 (52%)
 Frame = -2

Query: 513 RSVISWTAMIGACAAHGHGEDALELFSDMLKGGVRPNIFTFTAVLTACKHSGLINEGRKH 334
           ++++SW AMI A   +  G +A++LF  M    V  +  T  +V++AC   G +N GR  
Sbjct: 293 QNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDFDYITMVSVISACASLGALNTGRWM 352

Query: 333 FESMTRDYKIVPGVEQCACLVDLLGRAGQLSEAYEFVKRMPVKPDVGVWGALLGACRIHG 154
            E + R   +   V     L+D+  + G +  A E  +R+P +  V  W +++GAC  HG
Sbjct: 353 HELVKRK-GLEINVSITNALIDMYAKCGNIDLAREVFERLPCRSVVS-WTSMIGACASHG 410

Query: 153 N 151
           +
Sbjct: 411 H 411


>gb|ADE77588.1| unknown [Picea sitchensis]
          Length = 312

 Score =  209 bits (532), Expect = 2e-52
 Identities = 98/171 (57%), Positives = 127/171 (74%)
 Frame = -2

Query: 513 RSVISWTAMIGACAAHGHGEDALELFSDMLKGGVRPNIFTFTAVLTACKHSGLINEGRKH 334
           ++V+SW AMI     HGHGEDAL LF+ M + GV+PN  TF +VL+AC H+GL++EG K 
Sbjct: 4   KNVVSWNAMIVGYGMHGHGEDALVLFTQMQQRGVKPNEITFISVLSACSHAGLVDEGWKC 63

Query: 333 FESMTRDYKIVPGVEQCACLVDLLGRAGQLSEAYEFVKRMPVKPDVGVWGALLGACRIHG 154
           +  MT DY I P VE  AC+VDLLGRAG L+EA++F+++MP++P   VWGA LG+CRIH 
Sbjct: 64  YNCMTLDYAITPTVEHYACMVDLLGRAGHLNEAWDFIEKMPIEPGASVWGAFLGSCRIHC 123

Query: 153 NLDLAELVAEHLFKLDSQNVTCYVLMLNIYAEASRWDDVAKLRKLMGEKEL 1
           N++L E VAE L  LD  N   YVL+ NIYA A RWDDVAK+RK+M EK++
Sbjct: 124 NIELGERVAELLLNLDPDNAGYYVLLSNIYAAAGRWDDVAKVRKMMKEKDV 174


>gb|ADE77505.1| unknown [Picea sitchensis]
          Length = 514

 Score =  207 bits (526), Expect = 9e-52
 Identities = 95/170 (55%), Positives = 124/170 (72%)
 Frame = -2

Query: 516 QRSVISWTAMIGACAAHGHGEDALELFSDMLKGGVRPNIFTFTAVLTACKHSGLINEGRK 337
           QR+ +SW ++I  CA HG G DA+ LF  ML+ G++PN  +F  VL+AC H+GL+NEGR 
Sbjct: 205 QRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVGVLSACSHTGLVNEGRG 264

Query: 336 HFESMTRDYKIVPGVEQCACLVDLLGRAGQLSEAYEFVKRMPVKPDVGVWGALLGACRIH 157
           +F  MT++Y IVP V    C++DLLGRAG L EA  F+  MPV+PDV VWGALLGACRIH
Sbjct: 265 YFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPVEPDVSVWGALLGACRIH 324

Query: 156 GNLDLAELVAEHLFKLDSQNVTCYVLMLNIYAEASRWDDVAKLRKLMGEK 7
           GN +LA+ +AEHL  ++ Q    YVL+ NIYA A +WDD AK+RKLM ++
Sbjct: 325 GNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAGQWDDAAKVRKLMKDR 374



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 38/135 (28%), Positives = 74/135 (54%)
 Frame = -2

Query: 516 QRSVISWTAMIGACAAHGHGEDALELFSDMLKGGVRPNIFTFTAVLTACKHSGLINEGRK 337
           +R V+SWTA+I   A +G+G+++L +F+ M K G++ + F   +VL+AC     +  GR+
Sbjct: 104 ERDVVSWTAVIAGYAQNGYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQ 163

Query: 336 HFESMTRDYKIVPGVEQCACLVDLLGRAGQLSEAYEFVKRMPVKPDVGVWGALLGACRIH 157
            F +          +   + LVD+  ++G + +A +   +MP + +V  W +++  C  H
Sbjct: 164 -FHAYVVQSGFALDIVVGSALVDMYAKSGSMEDACQVFDKMPQRNEVS-WNSIITGCAQH 221

Query: 156 GNLDLAELVAEHLFK 112
           G  + A L+ E + +
Sbjct: 222 GRGNDAVLLFEQMLQ 236


>gb|ABR17838.1| unknown [Picea sitchensis]
          Length = 795

 Score =  206 bits (525), Expect = 1e-51
 Identities = 98/170 (57%), Positives = 124/170 (72%)
 Frame = -2

Query: 516 QRSVISWTAMIGACAAHGHGEDALELFSDMLKGGVRPNIFTFTAVLTACKHSGLINEGRK 337
           ++ V+SWT MI A   HGHGEDAL LFS M + G + +   FTA+LTAC H+GL+++G +
Sbjct: 486 EQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQ 545

Query: 336 HFESMTRDYKIVPGVEQCACLVDLLGRAGQLSEAYEFVKRMPVKPDVGVWGALLGACRIH 157
           +F+ M  DY + P +E  ACLVDLLGRAG L EA   +K M ++PD  VWGALLGACRIH
Sbjct: 546 YFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGACRIH 605

Query: 156 GNLDLAELVAEHLFKLDSQNVTCYVLMLNIYAEASRWDDVAKLRKLMGEK 7
            N++L E  A+HLF+LD  N   YVL+ NIYAEA RW+DVAKLRK+M EK
Sbjct: 606 CNIELGEQAAKHLFELDPDNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEK 655



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 40/126 (31%), Positives = 67/126 (53%), Gaps = 4/126 (3%)
 Frame = -2

Query: 516 QRSVISWTAMIGACAAHGHGEDALELFSDMLKGGVRPNIFTFTAVLTACKHSGLINEGRK 337
           +++V++W A+I   + HGH  +AL LF +M   G++P+ F   +VL AC H   + +G++
Sbjct: 385 KKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQ 444

Query: 336 HFESMTRDYKIVPGVEQCAC----LVDLLGRAGQLSEAYEFVKRMPVKPDVGVWGALLGA 169
                   Y I  G E        LVD+  + G ++ A +  +RMP + DV  W  ++ A
Sbjct: 445 -----IHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMP-EQDVVSWTTMILA 498

Query: 168 CRIHGN 151
             IHG+
Sbjct: 499 YGIHGH 504



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
 Frame = -2

Query: 516 QRSVISWTAMIGACAAHGHGEDALELFSDMLKGGVRPNIFTFTAVLTACKHSGLINEGRK 337
           +R V+SW A+I   + +G   +AL LFS+M   G++PN  T  +V+  C H   + +G++
Sbjct: 183 KRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQ 242

Query: 336 HFESMTRDYKIVPGVEQCAC----LVDLLGRAGQLSEAYEFVKRMPVKPDVGVWGALLG 172
                   Y I  G+E        LV++  + G ++ A++  +RMP++ DV  W A++G
Sbjct: 243 -----IHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIR-DVASWNAIIG 295



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 39/125 (31%), Positives = 62/125 (49%), Gaps = 4/125 (3%)
 Frame = -2

Query: 513 RSVISWTAMIGACAAHGHGEDALELFSDMLKGGVRPNIFTFTAVLTACKHSGLINEGRKH 334
           R V SW A+IG  + +    +AL  F+ M   G++PN  T  +VL AC H   + +G++ 
Sbjct: 285 RDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQ- 343

Query: 333 FESMTRDYKIVPGVEQ----CACLVDLLGRAGQLSEAYEFVKRMPVKPDVGVWGALLGAC 166
                  Y I  G E        LV++  + G ++ AY+  +RMP K +V  W A++   
Sbjct: 344 ----IHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMP-KKNVVAWNAIISGY 398

Query: 165 RIHGN 151
             HG+
Sbjct: 399 SQHGH 403