BLASTX nr result
ID: Coptis21_contig00018281
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00018281 (482 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_568151.1| uncharacterized protein [Arabidopsis thaliana] ... 57 2e-06 dbj|BAB09965.1| unnamed protein product [Arabidopsis thaliana] 57 2e-06 emb|CAN82940.1| hypothetical protein VITISV_013127 [Vitis vinifera] 56 3e-06 ref|XP_002871145.1| hypothetical protein ARALYDRAFT_908428 [Arab... 55 8e-06 ref|NP_001142521.1| uncharacterized protein LOC100274759 [Zea ma... 55 8e-06 >ref|NP_568151.1| uncharacterized protein [Arabidopsis thaliana] gi|17386124|gb|AAL38608.1|AF446875_1 AT5g05220/K18I23_2 [Arabidopsis thaliana] gi|15450647|gb|AAK96595.1| AT5g05220/K18I23_2 [Arabidopsis thaliana] gi|332003460|gb|AED90843.1| uncharacterized protein [Arabidopsis thaliana] Length = 182 Score = 56.6 bits (135), Expect = 2e-06 Identities = 25/42 (59%), Positives = 33/42 (78%), Gaps = 1/42 (2%) Frame = +2 Query: 296 AIMGEDEGREPNDYHRRAHIFDTCARVFKSLKEE-DSVPVDY 418 AIMG D+GR+P DY+RRA IFD +++FK+L E+ D PVDY Sbjct: 97 AIMGNDDGRDPRDYNRRAKIFDKSSKIFKNLNEQRDQAPVDY 138 >dbj|BAB09965.1| unnamed protein product [Arabidopsis thaliana] Length = 205 Score = 56.6 bits (135), Expect = 2e-06 Identities = 25/42 (59%), Positives = 33/42 (78%), Gaps = 1/42 (2%) Frame = +2 Query: 296 AIMGEDEGREPNDYHRRAHIFDTCARVFKSLKEE-DSVPVDY 418 AIMG D+GR+P DY+RRA IFD +++FK+L E+ D PVDY Sbjct: 120 AIMGNDDGRDPRDYNRRAKIFDKSSKIFKNLNEQRDQAPVDY 161 >emb|CAN82940.1| hypothetical protein VITISV_013127 [Vitis vinifera] Length = 141 Score = 56.2 bits (134), Expect = 3e-06 Identities = 26/36 (72%), Positives = 30/36 (83%) Frame = +2 Query: 296 AIMGEDEGREPNDYHRRAHIFDTCARVFKSLKEEDS 403 AIMGEDEGREP DY+RRA IF ARVF++LKE D+ Sbjct: 104 AIMGEDEGREPTDYNRRAKIFSESARVFRALKEGDT 139 >ref|XP_002871145.1| hypothetical protein ARALYDRAFT_908428 [Arabidopsis lyrata subsp. lyrata] gi|297316982|gb|EFH47404.1| hypothetical protein ARALYDRAFT_908428 [Arabidopsis lyrata subsp. lyrata] Length = 183 Score = 54.7 bits (130), Expect = 8e-06 Identities = 24/42 (57%), Positives = 34/42 (80%), Gaps = 1/42 (2%) Frame = +2 Query: 296 AIMGEDEGREPNDYHRRAHIFDTCARVFKSLKEE-DSVPVDY 418 AIMG+D+GR+P DY+RRA IFD +++FK+ KE+ D PV+Y Sbjct: 97 AIMGDDDGRDPTDYNRRAKIFDKSSKIFKNSKEQRDQSPVEY 138 >ref|NP_001142521.1| uncharacterized protein LOC100274759 [Zea mays] gi|195605734|gb|ACG24697.1| hypothetical protein [Zea mays] gi|195658805|gb|ACG48870.1| hypothetical protein [Zea mays] gi|414866665|tpg|DAA45222.1| TPA: hypothetical protein ZEAMMB73_880071 [Zea mays] Length = 159 Score = 54.7 bits (130), Expect = 8e-06 Identities = 38/118 (32%), Positives = 50/118 (42%) Frame = +2 Query: 41 PNNPAMMFKTHAKSIMPTSSRISLPKWRVTISNKLNKQREISGQAFSKEEHEIPRIPLID 220 P P T ++ T+SR+ + WR + +L G E P D Sbjct: 16 PEVPRARAATACQARATTTSRVCV--WRAAPARRLRANTPRGGGTTEPVE------PRKD 67 Query: 221 RLEHVVVEKERDXXXXXXXXXXXXXAIMGEDEGREPNDYHRRAHIFDTCARVFKSLKE 394 V + E AIMGEDEGR P DY RRAHIF+ +RVF+ LK+ Sbjct: 68 GPASAVDQAEEAGLAPEELEVLEEAAIMGEDEGRRPTDYDRRAHIFEESSRVFRDLKQ 125