BLASTX nr result

ID: Coptis21_contig00018268 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018268
         (1296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523797.1| conserved hypothetical protein [Ricinus comm...   594   e-167
ref|XP_002313592.1| predicted protein [Populus trichocarpa] gi|2...   585   e-165
emb|CAN71956.1| hypothetical protein VITISV_009884 [Vitis vinifera]   578   e-162
ref|XP_003538118.1| PREDICTED: F-box/LRR-repeat protein At1g6719...   577   e-162
ref|XP_002528739.1| conserved hypothetical protein [Ricinus comm...   573   e-161

>ref|XP_002523797.1| conserved hypothetical protein [Ricinus communis]
            gi|223536885|gb|EEF38523.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 419

 Score =  594 bits (1532), Expect = e-167
 Identities = 294/395 (74%), Positives = 333/395 (84%)
 Frame = +3

Query: 3    ASATCKKWREACRHHLQTLSFNSIDWPVYRDLTTSRLEILITQTIFQTTGLHCLSILMDD 182
            ASATC+KWREACR HL TLSFNS DWPVY DLTTSRLEILITQTIFQTTGL  L+ILMDD
Sbjct: 25   ASATCRKWREACRRHLHTLSFNSNDWPVYHDLTTSRLEILITQTIFQTTGLQGLTILMDD 84

Query: 183  VEEFSAAPVIAWLMYTRESLRQLFYNVRTTPNVNILEKCGRQKLEILALAHNSITGVEFS 362
            VEEFSA+ VIAWLMYTRE+LR+LFYNVRTTPNVNILE CGRQKLE L L+HNSITGVE +
Sbjct: 85   VEEFSASTVIAWLMYTRETLRRLFYNVRTTPNVNILEICGRQKLETLELSHNSITGVEPN 144

Query: 363  YQRYPCLRSLCLSYVSISALDLSLLITACPKIESLALVNPEIAMSDSQATMELTSPTLKD 542
            +QR+PCL+SL LSYVSISALDLSLL+TACPKIE L L+NPEIAMSD+Q T+EL+SPTLK 
Sbjct: 145  FQRFPCLKSLSLSYVSISALDLSLLLTACPKIELLELINPEIAMSDAQVTIELSSPTLKS 204

Query: 543  IYVEAISLDKFILEADSLECLHIKDCTLELFELIGKGTLKHLKIDDVSVIHLDIGESTEN 722
            +YVEAISLDKFILEADS+ECLH+KDC LELFELIGKG LKH KIDDVSVIHLDIGE+ +N
Sbjct: 205  VYVEAISLDKFILEADSIECLHLKDCALELFELIGKGNLKHFKIDDVSVIHLDIGETVDN 264

Query: 723  LEVVDVSNFTIMWPKFYQMIXXXXXXXXXXXWSXXXXXXXXXXXXXXXXXCFPRLCHLSL 902
            LE+VDVSNFTI+WPKFYQ+I           W                   FP+L HLSL
Sbjct: 265  LEIVDVSNFTIIWPKFYQLISKSSKLRRLRLWDVVFDDDDGIVDLETIAVYFPQLSHLSL 324

Query: 903  SYDLRDGLLHYGLQGSSRLENVAVLELGWTLITDLFSYWVGGLLERCPNLKKLVIHGVVS 1082
            SYDLRDG+L YGLQGSS L NV VLELGWT+I DLFS+WV GLL+RCPNL+KLVI+GVVS
Sbjct: 325  SYDLRDGVLQYGLQGSSNLVNVVVLELGWTVINDLFSHWVEGLLKRCPNLRKLVIYGVVS 384

Query: 1083 EVKTSEECQSLANFSTFIVRVMKKYMHVEVQFEYE 1187
            E K+ EECQ LANF++ IV++M+KY +V+VQF+YE
Sbjct: 385  EAKSQEECQMLANFTSSIVQLMRKYTNVDVQFQYE 419


>ref|XP_002313592.1| predicted protein [Populus trichocarpa] gi|222850000|gb|EEE87547.1|
            predicted protein [Populus trichocarpa]
          Length = 419

 Score =  585 bits (1508), Expect = e-165
 Identities = 288/395 (72%), Positives = 333/395 (84%)
 Frame = +3

Query: 3    ASATCKKWREACRHHLQTLSFNSIDWPVYRDLTTSRLEILITQTIFQTTGLHCLSILMDD 182
            ASATC+KWREA R HL TLSFNS D  VY+DLTTSRL+ILITQTIFQTTGL  LSILMDD
Sbjct: 25   ASATCRKWREAWRKHLHTLSFNSNDCNVYQDLTTSRLQILITQTIFQTTGLQGLSILMDD 84

Query: 183  VEEFSAAPVIAWLMYTRESLRQLFYNVRTTPNVNILEKCGRQKLEILALAHNSITGVEFS 362
            V+EFSA+ VIAWLMYTRE+L +L YNVRT PNVNILE CGRQK+E+L L+HNSITGVE +
Sbjct: 85   VDEFSASTVIAWLMYTRETLHRLIYNVRTNPNVNILEICGRQKMEMLELSHNSITGVEPN 144

Query: 363  YQRYPCLRSLCLSYVSISALDLSLLITACPKIESLALVNPEIAMSDSQATMELTSPTLKD 542
            +QR+PCL+SL LSYVSISALDL+LL+TACPKIE+L L+NPEIAMSD+Q T+EL+SPTLK 
Sbjct: 145  FQRFPCLKSLSLSYVSISALDLNLLLTACPKIETLELINPEIAMSDAQVTVELSSPTLKR 204

Query: 543  IYVEAISLDKFILEADSLECLHIKDCTLELFELIGKGTLKHLKIDDVSVIHLDIGESTEN 722
            +YVEAISLDKFILEADS+ECLH+KDC LELFELIGKGTLKH KIDDVSVIHLDIG++ +N
Sbjct: 205  VYVEAISLDKFILEADSIECLHLKDCALELFELIGKGTLKHFKIDDVSVIHLDIGDTVDN 264

Query: 723  LEVVDVSNFTIMWPKFYQMIXXXXXXXXXXXWSXXXXXXXXXXXXXXXXXCFPRLCHLSL 902
            LE++DVSNFTIMWPKFYQMI           W                  CFP L HL+L
Sbjct: 265  LEIIDVSNFTIMWPKFYQMISKSSKLTKLRLWDVVFDDEDEIVDLETIAVCFPHLIHLAL 324

Query: 903  SYDLRDGLLHYGLQGSSRLENVAVLELGWTLITDLFSYWVGGLLERCPNLKKLVIHGVVS 1082
            SYDLRDG+++YGLQGSS LENV VLELGWT+I DLFS+WV GLL+ CPNL+KLVIHGVVS
Sbjct: 325  SYDLRDGVVNYGLQGSSHLENVFVLELGWTIINDLFSHWVEGLLKLCPNLRKLVIHGVVS 384

Query: 1083 EVKTSEECQSLANFSTFIVRVMKKYMHVEVQFEYE 1187
            E K+ EECQ LANF++ IV++M+KYMHV+VQF+YE
Sbjct: 385  EAKSHEECQMLANFTSSIVQLMRKYMHVDVQFDYE 419


>emb|CAN71956.1| hypothetical protein VITISV_009884 [Vitis vinifera]
          Length = 421

 Score =  578 bits (1490), Expect = e-162
 Identities = 290/397 (73%), Positives = 332/397 (83%), Gaps = 2/397 (0%)
 Frame = +3

Query: 3    ASATCKKWREACRHHLQTLSFNSIDWPVYRDLTTSRLEILITQTIFQTTGLHCLSILMDD 182
            ASATC+KWREA ++HL TLSFNS DWPVY DLTTSRLEILITQTIFQT+GL  LSI MDD
Sbjct: 25   ASATCRKWREAWQNHLHTLSFNSNDWPVYHDLTTSRLEILITQTIFQTSGLEYLSICMDD 84

Query: 183  VEEFSAAPVIAWLMYTRESLRQLFYNVRTTPNVNILEKCGRQKLEILALAHNSITGVEFS 362
            V+EFSAAPVIAWLMYTRE+LRQL+YNVRTTP++NILEKC RQKLE+L LA NSITGVE S
Sbjct: 85   VDEFSAAPVIAWLMYTRETLRQLYYNVRTTPSINILEKCSRQKLEVLDLAQNSITGVEPS 144

Query: 363  YQRYPCLRSLCLSYVSISALDLSLLITACPKIESLALVNPEIAMSDSQATMELTSPTLKD 542
            YQ++PCL+SL L YVSISALDL+LL+TACPKIE LAL+N +IA+SD+ ATMEL SP+LKD
Sbjct: 145  YQKFPCLKSLSLRYVSISALDLNLLLTACPKIEVLALINLDIALSDATATMELASPSLKD 204

Query: 543  IYVEAISLDKFILEADSLECLHIKDCTLELFELIGKGTLKHLKIDDVSVIHLDIGESTEN 722
            IYVEAIS+DKF LEAD+LE LH+KDCTL++FELIGKG L+ LKIDDVSVIHLDIGESTEN
Sbjct: 205  IYVEAISMDKFTLEADNLENLHLKDCTLDVFELIGKGALRILKIDDVSVIHLDIGESTEN 264

Query: 723  LEVVDVSNFTIMWPKFYQMIXXXXXXXXXXXWSXXXXXXXXXXXXXXXXXCFPRLCHLSL 902
            LEVVDVSNFTIMWPKFY MI           W                  CFPRL H+SL
Sbjct: 265  LEVVDVSNFTIMWPKFYHMISRSSKLKRLRLWGVVFDDEDEVVDLEAISVCFPRLTHVSL 324

Query: 903  SYDLRDGLLH--YGLQGSSRLENVAVLELGWTLITDLFSYWVGGLLERCPNLKKLVIHGV 1076
            SYDLRDG L   YGLQGS+ LENV VLELGWT++++LFS WV GL++RCPNLKKL+I G+
Sbjct: 325  SYDLRDGDLRDGYGLQGSTHLENVVVLELGWTVMSNLFSPWVAGLVDRCPNLKKLIIFGI 384

Query: 1077 VSEVKTSEECQSLANFSTFIVRVMKKYMHVEVQFEYE 1187
            +SEVKT EEC  LANF++ IVR+M+KY+HVEVQFEYE
Sbjct: 385  ISEVKTHEECLILANFTSSIVRLMRKYLHVEVQFEYE 421


>ref|XP_003538118.1| PREDICTED: F-box/LRR-repeat protein At1g67190-like [Glycine max]
          Length = 419

 Score =  577 bits (1487), Expect = e-162
 Identities = 282/395 (71%), Positives = 327/395 (82%)
 Frame = +3

Query: 3    ASATCKKWREACRHHLQTLSFNSIDWPVYRDLTTSRLEILITQTIFQTTGLHCLSILMDD 182
            ASATC+KWR+AC  HL TLSF+S DWP+YRDLTT+RLEILITQTIFQ++GL  LSILM+D
Sbjct: 25   ASATCRKWRQACCKHLHTLSFSSKDWPIYRDLTTTRLEILITQTIFQSSGLQALSILMED 84

Query: 183  VEEFSAAPVIAWLMYTRESLRQLFYNVRTTPNVNILEKCGRQKLEILALAHNSITGVEFS 362
            V+EFSA+ V AWL+YTRE+LRQL YNV+TTPNVNILE CGR KLEIL LAHNSI GVE +
Sbjct: 85   VDEFSASTVTAWLLYTRETLRQLHYNVKTTPNVNILEICGRHKLEILDLAHNSIVGVEPN 144

Query: 363  YQRYPCLRSLCLSYVSISALDLSLLITACPKIESLALVNPEIAMSDSQATMELTSPTLKD 542
            YQR+PCL+SL LSYVSISALDL+LL+ ACPKIE+L LVNPEIAMSD+Q T+EL+S TLK 
Sbjct: 145  YQRFPCLKSLSLSYVSISALDLNLLVFACPKIEALELVNPEIAMSDAQVTVELSSLTLKS 204

Query: 543  IYVEAISLDKFILEADSLECLHIKDCTLELFELIGKGTLKHLKIDDVSVIHLDIGESTEN 722
            +YVEAISLDKF+LEAD LECLH+KDC LE FELIGKGTLKH KIDDVSVIHLDIGE+ EN
Sbjct: 205  VYVEAISLDKFLLEADGLECLHLKDCALEFFELIGKGTLKHFKIDDVSVIHLDIGETVEN 264

Query: 723  LEVVDVSNFTIMWPKFYQMIXXXXXXXXXXXWSXXXXXXXXXXXXXXXXXCFPRLCHLSL 902
            LE VD+SNFTI+WPKFYQMI           W                  CFP L HLSL
Sbjct: 265  LETVDISNFTIIWPKFYQMISRSSNLKRLRLWDVMFDDEDEVVDLETIATCFPYLSHLSL 324

Query: 903  SYDLRDGLLHYGLQGSSRLENVAVLELGWTLITDLFSYWVGGLLERCPNLKKLVIHGVVS 1082
            SYD+RDG+LHYGLQGSS LE+V VLELGWT+I DLFS+WV GLL+RCPNLKKLVIHG+VS
Sbjct: 325  SYDVRDGVLHYGLQGSSYLESVVVLELGWTVINDLFSHWVEGLLKRCPNLKKLVIHGIVS 384

Query: 1083 EVKTSEECQSLANFSTFIVRVMKKYMHVEVQFEYE 1187
            +VK+ EECQ LANF+T +V +M++Y HV+  F+Y+
Sbjct: 385  QVKSHEECQMLANFTTSMVELMRRYTHVDPYFKYD 419


>ref|XP_002528739.1| conserved hypothetical protein [Ricinus communis]
            gi|223531833|gb|EEF33651.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 419

 Score =  573 bits (1478), Expect = e-161
 Identities = 285/395 (72%), Positives = 328/395 (83%)
 Frame = +3

Query: 3    ASATCKKWREACRHHLQTLSFNSIDWPVYRDLTTSRLEILITQTIFQTTGLHCLSILMDD 182
            AS TCKKWREA R HL +LSFN+ DWPVY +LTTSRLEILITQTIFQT GL  LSI MDD
Sbjct: 25   ASTTCKKWREAWRSHLHSLSFNTNDWPVYHELTTSRLEILITQTIFQTFGLQNLSIFMDD 84

Query: 183  VEEFSAAPVIAWLMYTRESLRQLFYNVRTTPNVNILEKCGRQKLEILALAHNSITGVEFS 362
             +EFSAAPVIAWLMYTRE+LR+L+YNVRT PN+NI+EKCGR KLE+LALAHNSITGVE S
Sbjct: 85   ADEFSAAPVIAWLMYTRETLRELYYNVRTNPNINIIEKCGRHKLEVLALAHNSITGVEPS 144

Query: 363  YQRYPCLRSLCLSYVSISALDLSLLITACPKIESLALVNPEIAMSDSQATMELTSPTLKD 542
            YQ++PCL+SL LSYVSISALDLSLL++ACPKIE+L LVNP+IAMSD+QATMELT+ +LKD
Sbjct: 145  YQKFPCLKSLALSYVSISALDLSLLLSACPKIETLTLVNPDIAMSDAQATMELTTSSLKD 204

Query: 543  IYVEAISLDKFILEADSLECLHIKDCTLELFELIGKGTLKHLKIDDVSVIHLDIGESTEN 722
            IYVEAISLDKFILEADSLE LH+KDCTLELFELIGKG+L+ LKIDDVSV+HLDIGEST N
Sbjct: 205  IYVEAISLDKFILEADSLEKLHLKDCTLELFELIGKGSLRVLKIDDVSVLHLDIGESTSN 264

Query: 723  LEVVDVSNFTIMWPKFYQMIXXXXXXXXXXXWSXXXXXXXXXXXXXXXXXCFPRLCHLSL 902
            LEVVDVSNFTI  PKFY MI           W                  CFP+L +LSL
Sbjct: 265  LEVVDVSNFTITGPKFYNMISKSSKLVRLRLWGVALDDEDEVLDLDTMPVCFPQLTYLSL 324

Query: 903  SYDLRDGLLHYGLQGSSRLENVAVLELGWTLITDLFSYWVGGLLERCPNLKKLVIHGVVS 1082
            +YDLRD +LHYGL GS +  NV +LELGW++I+DLF+ WV GLL RCPNL+KLVI+GVVS
Sbjct: 325  NYDLRDDVLHYGLHGSYQFNNVIMLELGWSVISDLFTDWVAGLLARCPNLRKLVIYGVVS 384

Query: 1083 EVKTSEECQSLANFSTFIVRVMKKYMHVEVQFEYE 1187
            E KT +ECQ LANF++ IV +M+KYMH+E+QFEYE
Sbjct: 385  EAKTHDECQILANFTSSIVCLMRKYMHIEIQFEYE 419


Top