BLASTX nr result
ID: Coptis21_contig00018260
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00018260
(1045 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002266805.1| PREDICTED: sodium/bile acid cotransporter 7-... 184 1e-86
ref|XP_002274544.2| PREDICTED: sodium/bile acid cotransporter 7-... 164 7e-77
emb|CBI28336.3| unnamed protein product [Vitis vinifera] 164 7e-77
ref|XP_003535876.1| PREDICTED: sodium/bile acid cotransporter 7-... 162 2e-75
gb|ABR16540.1| unknown [Picea sitchensis] 159 7e-72
>ref|XP_002266805.1| PREDICTED: sodium/bile acid cotransporter 7-like [Vitis vinifera]
Length = 419
Score = 184 bits (467), Expect(3) = 1e-86
Identities = 93/123 (75%), Positives = 105/123 (85%)
Frame = +3
Query: 384 SKVPWIQVSKSRSLLLMVKPAVFLLAVGMGMFLHLILLAFNTLVAQSLSIALGGKISVFS 563
S VPWIQVS+SRSLLLMVKPAVFL+A+GMG LHL+LLAFN L QSLS GG S F+
Sbjct: 288 SLVPWIQVSRSRSLLLMVKPAVFLVAIGMGTVLHLVLLAFNALSIQSLSAVSGGSKSPFA 347
Query: 564 KKENYRAFVLVASQKTLPVMVAVVEQLHGAMGESGLLVLPCVAAHINQIIFDSILVNLWL 743
K++N AF+LVASQKTLPVMVAVVEQLHG +GESGLLVLPCVAAH+NQII DS L+N+WL
Sbjct: 348 KRQNTVAFLLVASQKTLPVMVAVVEQLHGTLGESGLLVLPCVAAHLNQIIMDSFLINIWL 407
Query: 744 QKD 752
KD
Sbjct: 408 GKD 410
Score = 157 bits (398), Expect(3) = 1e-86
Identities = 84/117 (71%), Positives = 90/117 (76%)
Frame = +2
Query: 50 SILLVSPFFSKLILLLQLAPQEFVTGLAIFSCMPTTLSSGVALTQLVGGNSALALAMTVI 229
SILL +P FS+LIL QL PQEF+TGLAIFSCMPTTLSSGVALTQL GGNSALALAMTVI
Sbjct: 154 SILLFTPLFSRLILQFQLQPQEFITGLAIFSCMPTTLSSGVALTQLAGGNSALALAMTVI 213
Query: 230 SNLLGIFMVPFSLSKFIADGVGVSVPTDQXXXXXXXXXXXXXXXGKVFRDCFKGSMD 400
SNLLGI +VPFS+SKFIADGVGVSVPT Q GKV R+ FKG D
Sbjct: 214 SNLLGILIVPFSISKFIADGVGVSVPTKQLLRSLVVTLLIPLILGKVLRESFKGVAD 270
Score = 26.9 bits (58), Expect(3) = 1e-86
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = +1
Query: 1 AEAWPIGLFGL 33
AEAWP+G+FGL
Sbjct: 142 AEAWPVGIFGL 152
>ref|XP_002274544.2| PREDICTED: sodium/bile acid cotransporter 7-like [Vitis vinifera]
Length = 454
Score = 164 bits (415), Expect(3) = 7e-77
Identities = 89/135 (65%), Positives = 105/135 (77%), Gaps = 5/135 (3%)
Frame = +3
Query: 366 RSFEIASKV-----PWIQVSKSRSLLLMVKPAVFLLAVGMGMFLHLILLAFNTLVAQSLS 530
R F IAS + PW+QVSKS +LLLMV P VFL A+GMG+ H+ILL FN + QSLS
Sbjct: 313 RIFSIASTILLSLTPWMQVSKSGALLLMVNPVVFLEAIGMGILGHIILLGFNAIALQSLS 372
Query: 531 IALGGKISVFSKKENYRAFVLVASQKTLPVMVAVVEQLHGAMGESGLLVLPCVAAHINQI 710
A+ G+ SVF KKEN RA ++V+SQK L ++VAVVEQL GA+GESGLLVLPCVAAHINQI
Sbjct: 373 -AIFGRESVFGKKENARALLVVSSQKALLIVVAVVEQLGGALGESGLLVLPCVAAHINQI 431
Query: 711 IFDSILVNLWLQKDQ 755
I DS LVN WLQKD+
Sbjct: 432 IIDSFLVNFWLQKDR 446
Score = 149 bits (376), Expect(3) = 7e-77
Identities = 76/115 (66%), Positives = 91/115 (79%)
Frame = +2
Query: 47 ISILLVSPFFSKLILLLQLAPQEFVTGLAIFSCMPTTLSSGVALTQLVGGNSALALAMTV 226
+SILL+SPFFSK+IL +QLAPQEFVTGLAIFSCMPTTLSSGVALTQLV GN+ALALAMTV
Sbjct: 189 VSILLLSPFFSKIILQIQLAPQEFVTGLAIFSCMPTTLSSGVALTQLVCGNAALALAMTV 248
Query: 227 ISNLLGIFMVPFSLSKFIADGVGVSVPTDQXXXXXXXXXXXXXXXGKVFRDCFKG 391
+SNLLGI +VPF +S+F+A+ G S+PT++ GKV R CF+G
Sbjct: 249 MSNLLGILIVPFWISRFLANDFGASIPTEKLLWSLIFTLLVPLVLGKVLRSCFQG 303
Score = 22.7 bits (47), Expect(3) = 7e-77
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1
Query: 1 AEAWPIGLFGLV 36
AEAWP +FGLV
Sbjct: 178 AEAWPALVFGLV 189
>emb|CBI28336.3| unnamed protein product [Vitis vinifera]
Length = 419
Score = 164 bits (415), Expect(3) = 7e-77
Identities = 89/135 (65%), Positives = 105/135 (77%), Gaps = 5/135 (3%)
Frame = +3
Query: 366 RSFEIASKV-----PWIQVSKSRSLLLMVKPAVFLLAVGMGMFLHLILLAFNTLVAQSLS 530
R F IAS + PW+QVSKS +LLLMV P VFL A+GMG+ H+ILL FN + QSLS
Sbjct: 278 RIFSIASTILLSLTPWMQVSKSGALLLMVNPVVFLEAIGMGILGHIILLGFNAIALQSLS 337
Query: 531 IALGGKISVFSKKENYRAFVLVASQKTLPVMVAVVEQLHGAMGESGLLVLPCVAAHINQI 710
A+ G+ SVF KKEN RA ++V+SQK L ++VAVVEQL GA+GESGLLVLPCVAAHINQI
Sbjct: 338 -AIFGRESVFGKKENARALLVVSSQKALLIVVAVVEQLGGALGESGLLVLPCVAAHINQI 396
Query: 711 IFDSILVNLWLQKDQ 755
I DS LVN WLQKD+
Sbjct: 397 IIDSFLVNFWLQKDR 411
Score = 149 bits (376), Expect(3) = 7e-77
Identities = 76/115 (66%), Positives = 91/115 (79%)
Frame = +2
Query: 47 ISILLVSPFFSKLILLLQLAPQEFVTGLAIFSCMPTTLSSGVALTQLVGGNSALALAMTV 226
+SILL+SPFFSK+IL +QLAPQEFVTGLAIFSCMPTTLSSGVALTQLV GN+ALALAMTV
Sbjct: 154 VSILLLSPFFSKIILQIQLAPQEFVTGLAIFSCMPTTLSSGVALTQLVCGNAALALAMTV 213
Query: 227 ISNLLGIFMVPFSLSKFIADGVGVSVPTDQXXXXXXXXXXXXXXXGKVFRDCFKG 391
+SNLLGI +VPF +S+F+A+ G S+PT++ GKV R CF+G
Sbjct: 214 MSNLLGILIVPFWISRFLANDFGASIPTEKLLWSLIFTLLVPLVLGKVLRSCFQG 268
Score = 22.7 bits (47), Expect(3) = 7e-77
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1
Query: 1 AEAWPIGLFGLV 36
AEAWP +FGLV
Sbjct: 143 AEAWPALVFGLV 154
>ref|XP_003535876.1| PREDICTED: sodium/bile acid cotransporter 7-like [Glycine max]
Length = 426
Score = 162 bits (409), Expect(2) = 2e-75
Identities = 82/123 (66%), Positives = 97/123 (78%)
Frame = +3
Query: 384 SKVPWIQVSKSRSLLLMVKPAVFLLAVGMGMFLHLILLAFNTLVAQSLSIALGGKISVFS 563
S VPW QVS+SRSLLLMVKP+VFL+A+G+G LHL LL FN L LS+ GGK S+FS
Sbjct: 296 SLVPWTQVSRSRSLLLMVKPSVFLVAIGLGTLLHLSLLVFNILAVWGLSVISGGKNSIFS 355
Query: 564 KKENYRAFVLVASQKTLPVMVAVVEQLHGAMGESGLLVLPCVAAHINQIIFDSILVNLWL 743
+++N A VLVASQKTLPVMVAV+E L GA GESGLLVLPCVAAH+NQII D+ +VN
Sbjct: 356 REQNASALVLVASQKTLPVMVAVIEPLRGAFGESGLLVLPCVAAHLNQIILDTFIVNFLR 415
Query: 744 QKD 752
+D
Sbjct: 416 PQD 418
Score = 147 bits (372), Expect(2) = 2e-75
Identities = 76/125 (60%), Positives = 95/125 (76%)
Frame = +2
Query: 26 LG*FSLQISILLVSPFFSKLILLLQLAPQEFVTGLAIFSCMPTTLSSGVALTQLVGGNSA 205
+G F L +SIL ++P+FS++IL +QL PQEF+TGLAIF+CMPTTLSSGVALTQL GGNSA
Sbjct: 155 VGLFGL-VSILFLTPYFSRVILQIQLQPQEFITGLAIFACMPTTLSSGVALTQLAGGNSA 213
Query: 206 LALAMTVISNLLGIFMVPFSLSKFIADGVGVSVPTDQXXXXXXXXXXXXXXXGKVFRDCF 385
LALAMTVISN+LGI ++P S++KF+A GVGV++PT Q GKV R+ F
Sbjct: 214 LALAMTVISNMLGILIIPLSITKFVAAGVGVTLPTKQLFKSLVLTILIPLILGKVLRESF 273
Query: 386 KGSMD 400
KG D
Sbjct: 274 KGVAD 278
>gb|ABR16540.1| unknown [Picea sitchensis]
Length = 426
Score = 159 bits (403), Expect(3) = 7e-72
Identities = 77/125 (61%), Positives = 98/125 (78%)
Frame = +3
Query: 384 SKVPWIQVSKSRSLLLMVKPAVFLLAVGMGMFLHLILLAFNTLVAQSLSIALGGKISVFS 563
S VPW+QVS SR+LLL + P F+ A+ +GM LH I L+ NT++ SLS+ GGK S F
Sbjct: 295 SLVPWMQVSGSRALLLTISPMNFISAIAIGMCLHFIFLSLNTVIMHSLSLIFGGKRSTFG 354
Query: 564 KKENYRAFVLVASQKTLPVMVAVVEQLHGAMGESGLLVLPCVAAHINQIIFDSILVNLWL 743
K+ N RA ++VASQKTLPVMVA+V +L G +GE+GLLV+PCVAAHINQII DS LVN+WL
Sbjct: 355 KENNARAIIIVASQKTLPVMVAIVGRLGGVLGEAGLLVIPCVAAHINQIIMDSFLVNIWL 414
Query: 744 QKDQR 758
Q+D+R
Sbjct: 415 QQDKR 419
Score = 135 bits (340), Expect(3) = 7e-72
Identities = 71/115 (61%), Positives = 83/115 (72%)
Frame = +2
Query: 47 ISILLVSPFFSKLILLLQLAPQEFVTGLAIFSCMPTTLSSGVALTQLVGGNSALALAMTV 226
+SILL +PF S+L+L L+L PQEFVTGLA+F CMPTTLSSGVALTQ+VGGNSALAL++TV
Sbjct: 160 VSILLFTPFISRLVLQLKLIPQEFVTGLAMFCCMPTTLSSGVALTQVVGGNSALALSLTV 219
Query: 227 ISNLLGIFMVPFSLSKFIADGVGVSVPTDQXXXXXXXXXXXXXXXGKVFRDCFKG 391
SNLLGI VPF LSK +A GVGVSVP + GK R+ F G
Sbjct: 220 ASNLLGIVTVPFMLSKLVAQGVGVSVPAGELLKSLTLMILVPLLLGKGIRNSFNG 274
Score = 24.3 bits (51), Expect(3) = 7e-72
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +1
Query: 4 EAWPIGLFGLV 36
EAWP G FGLV
Sbjct: 150 EAWPAGAFGLV 160