BLASTX nr result

ID: Coptis21_contig00018258 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018258
         (766 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520702.1| conserved hypothetical protein [Ricinus comm...    56   7e-06

>ref|XP_002520702.1| conserved hypothetical protein [Ricinus communis]
           gi|223540087|gb|EEF41664.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 151

 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 50/152 (32%), Positives = 69/152 (45%), Gaps = 3/152 (1%)
 Frame = +2

Query: 140 EMDHRYMVDVSSFFLVEASGDSEEDLNQIVSMKNNTIAPAE-DDAESCSFESCGVNNAFM 316
           +MD +  VD+SS FLVEASGDSE  L+     K+   AP + DDAESCS   C V++ + 
Sbjct: 11  QMDTKKRVDLSSCFLVEASGDSEVGLDP----KDLAAAPDDNDDAESCS---CDVSDCYY 63

Query: 317 A-ECP-DNIXXXXXXXXXXXXXXXXXXTSYNIHNSLGDRNLAWQKMELLNQAWESMQTKQ 490
              C  DN                     Y  H    D +        ++     +Q  +
Sbjct: 64  YYSCVGDNTNSGEVEEASVHGVTDHNKEQYQEHED-EDEDEVQSYRTWVDGHINGVQVNK 122

Query: 491 KKHVKIGVVETHASKEMNEEEKNRHFWSTCLA 586
           K  V +       S+ MNE+E+NR FW +CLA
Sbjct: 123 KSCVSV----ESTSEPMNEKERNRLFWESCLA 150


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