BLASTX nr result
ID: Coptis21_contig00018252
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00018252 (307 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002281541.2| PREDICTED: THO complex subunit 2-like [Vitis... 157 6e-37 emb|CBI26799.3| unnamed protein product [Vitis vinifera] 157 6e-37 ref|XP_004142861.1| PREDICTED: THO complex subunit 2-like [Cucum... 151 6e-35 ref|XP_002325475.1| predicted protein [Populus trichocarpa] gi|2... 149 2e-34 ref|XP_002328963.1| predicted protein [Populus trichocarpa] gi|2... 149 2e-34 >ref|XP_002281541.2| PREDICTED: THO complex subunit 2-like [Vitis vinifera] Length = 1849 Score = 157 bits (398), Expect = 6e-37 Identities = 81/101 (80%), Positives = 89/101 (88%) Frame = +3 Query: 3 GELAIQKCKMVLDSVEFSDKESNEELSSVLADIVTQMAQDLTMPGEYRVRLIKVAKSLVE 182 GEL + KCK+ LDSVEFSDKE++EEL+S ADIVTQMA DLTMPGE R RLIK+AK LVE Sbjct: 48 GELPLHKCKVALDSVEFSDKEADEELASNFADIVTQMALDLTMPGENRARLIKLAKWLVE 107 Query: 183 YGLVPLKLFQERCEEEFLWESEMIKIKAQDLKAKEVRVNTR 305 LVPL+LFQERCEEEFLWESEMIKIKAQ+LK KEVRVNTR Sbjct: 108 STLVPLRLFQERCEEEFLWESEMIKIKAQELKNKEVRVNTR 148 >emb|CBI26799.3| unnamed protein product [Vitis vinifera] Length = 1767 Score = 157 bits (398), Expect = 6e-37 Identities = 81/101 (80%), Positives = 89/101 (88%) Frame = +3 Query: 3 GELAIQKCKMVLDSVEFSDKESNEELSSVLADIVTQMAQDLTMPGEYRVRLIKVAKSLVE 182 GEL + KCK+ LDSVEFSDKE++EEL+S ADIVTQMA DLTMPGE R RLIK+AK LVE Sbjct: 48 GELPLHKCKVALDSVEFSDKEADEELASNFADIVTQMALDLTMPGENRARLIKLAKWLVE 107 Query: 183 YGLVPLKLFQERCEEEFLWESEMIKIKAQDLKAKEVRVNTR 305 LVPL+LFQERCEEEFLWESEMIKIKAQ+LK KEVRVNTR Sbjct: 108 STLVPLRLFQERCEEEFLWESEMIKIKAQELKNKEVRVNTR 148 >ref|XP_004142861.1| PREDICTED: THO complex subunit 2-like [Cucumis sativus] gi|449506883|ref|XP_004162874.1| PREDICTED: THO complex subunit 2-like [Cucumis sativus] Length = 1887 Score = 151 bits (381), Expect = 6e-35 Identities = 73/101 (72%), Positives = 86/101 (85%) Frame = +3 Query: 3 GELAIQKCKMVLDSVEFSDKESNEELSSVLADIVTQMAQDLTMPGEYRVRLIKVAKSLVE 182 G+L QKCK LDSVEFS+K S EEL S AD++TQ+AQD+T+ GEYR RL+K+AK LVE Sbjct: 48 GDLPFQKCKAALDSVEFSEKMSAEELGSTFADVITQLAQDITLAGEYRARLLKLAKWLVE 107 Query: 183 YGLVPLKLFQERCEEEFLWESEMIKIKAQDLKAKEVRVNTR 305 VPL+LFQERCEEEFLWE+EMIKIKAQ+LK+KEVRVNTR Sbjct: 108 SAFVPLRLFQERCEEEFLWEAEMIKIKAQELKSKEVRVNTR 148 >ref|XP_002325475.1| predicted protein [Populus trichocarpa] gi|222862350|gb|EEE99856.1| predicted protein [Populus trichocarpa] Length = 1836 Score = 149 bits (377), Expect = 2e-34 Identities = 78/101 (77%), Positives = 82/101 (81%) Frame = +3 Query: 3 GELAIQKCKMVLDSVEFSDKESNEELSSVLADIVTQMAQDLTMPGEYRVRLIKVAKSLVE 182 GEL QKCK LDSVEF DK S L S ADI+TQMAQDLTM GEYR RLIK+AK LVE Sbjct: 50 GELPFQKCKAALDSVEFVDKVSAVGLGSNFADIITQMAQDLTMSGEYRSRLIKLAKWLVE 109 Query: 183 YGLVPLKLFQERCEEEFLWESEMIKIKAQDLKAKEVRVNTR 305 LVPL+ FQERCEEEFLWE+EMIKIKAQDLK KEVRVNTR Sbjct: 110 SALVPLRFFQERCEEEFLWEAEMIKIKAQDLKGKEVRVNTR 150 >ref|XP_002328963.1| predicted protein [Populus trichocarpa] gi|222839197|gb|EEE77548.1| predicted protein [Populus trichocarpa] Length = 1805 Score = 149 bits (377), Expect = 2e-34 Identities = 78/101 (77%), Positives = 82/101 (81%) Frame = +3 Query: 3 GELAIQKCKMVLDSVEFSDKESNEELSSVLADIVTQMAQDLTMPGEYRVRLIKVAKSLVE 182 GEL QKCK LDSVEF DK S L S ADI+TQMAQDLTM GEYR RLIK+AK LVE Sbjct: 50 GELPFQKCKAALDSVEFVDKMSAVGLGSNFADIITQMAQDLTMSGEYRSRLIKLAKWLVE 109 Query: 183 YGLVPLKLFQERCEEEFLWESEMIKIKAQDLKAKEVRVNTR 305 LVPL+ FQERCEEEFLWE+EMIKIKAQDLK KEVRVNTR Sbjct: 110 SALVPLRFFQERCEEEFLWEAEMIKIKAQDLKGKEVRVNTR 150