BLASTX nr result

ID: Coptis21_contig00018246 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018246
         (807 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301444.1| predicted protein [Populus trichocarpa] gi|2...   242   8e-62
ref|XP_002320233.1| predicted protein [Populus trichocarpa] gi|2...   241   2e-61
emb|CAN72415.1| hypothetical protein VITISV_027904 [Vitis vinifera]   240   2e-61
ref|XP_002515080.1| conserved hypothetical protein [Ricinus comm...   240   3e-61
ref|XP_003633928.1| PREDICTED: protein NDR1-like isoform 2 [Viti...   238   1e-60

>ref|XP_002301444.1| predicted protein [Populus trichocarpa] gi|222843170|gb|EEE80717.1|
           predicted protein [Populus trichocarpa]
          Length = 195

 Score =  242 bits (617), Expect = 8e-62
 Identities = 122/191 (63%), Positives = 139/191 (72%)
 Frame = +3

Query: 48  PNDMRRFVYTFIVIFLLLAGVTALIVWLVYRPHKPHFTVVGAAIYDLNXXXXXXXXXXXX 227
           P +  R + T I IFLLLAG+  LIVWL+YRPHKP FTVVGAAIYDLN            
Sbjct: 5   PRNTLRALCTLITIFLLLAGLAVLIVWLIYRPHKPQFTVVGAAIYDLNTTCPPFISTSMQ 64

Query: 228 XXVVTRNPNKRVSIYYDHLSAYVSYRNQQITPAVMLPPLYQETKTTVALSPIIGGGFVPV 407
             +VTRNPN+RVSI YD L+ YVSYRNQ ITP++ LPPLY  TK+TVALSP++GG  VPV
Sbjct: 65  FSLVTRNPNRRVSIMYDKLTTYVSYRNQAITPSLALPPLYHATKSTVALSPVLGGAGVPV 124

Query: 408 SMEVCNGLVMDQAYXXXXXXXXXXXXXKYKAGAIKTKRYGVFVTCDVMVGLKKGFVGQVP 587
           S+EV NGLVMD+AY             ++KAGAIKT RYGV+V CDV VGLKKGFVGQVP
Sbjct: 125 SVEVSNGLVMDEAYGVVALSVVLLGRLRWKAGAIKTLRYGVYVKCDVWVGLKKGFVGQVP 184

Query: 588 LLGSPDCNVDI 620
           LLGSP C VDI
Sbjct: 185 LLGSPKCKVDI 195


>ref|XP_002320233.1| predicted protein [Populus trichocarpa] gi|222861006|gb|EEE98548.1|
           predicted protein [Populus trichocarpa]
          Length = 214

 Score =  241 bits (614), Expect = 2e-61
 Identities = 119/206 (57%), Positives = 143/206 (69%)
 Frame = +3

Query: 3   EEHLHTTMTNEKGMAPNDMRRFVYTFIVIFLLLAGVTALIVWLVYRPHKPHFTVVGAAIY 182
           E + H  +T EKG    + R  ++TFI  FLLLAG+  LIVWL+YRPHKP FTVVGAA+Y
Sbjct: 9   ENNPHLLVTKEKGAGHKNPRHALFTFITTFLLLAGLAVLIVWLIYRPHKPRFTVVGAAVY 68

Query: 183 DLNXXXXXXXXXXXXXXVVTRNPNKRVSIYYDHLSAYVSYRNQQITPAVMLPPLYQETKT 362
           DLN              + TRNPN RVSI YD L+AYVSYRNQ ITP ++LPPLYQE K+
Sbjct: 69  DLNTTSPPFISTSMQFTIFTRNPNTRVSIMYDKLTAYVSYRNQAITPPLLLPPLYQEKKS 128

Query: 363 TVALSPIIGGGFVPVSMEVCNGLVMDQAYXXXXXXXXXXXXXKYKAGAIKTKRYGVFVTC 542
           TV +SP++ G  VPVS+EV +GLV D+AY             ++KAG IKT RYGV+V C
Sbjct: 129 TVVMSPVLVGAGVPVSVEVSDGLVRDEAYGVVALRVVLLGRLRWKAGGIKTGRYGVYVKC 188

Query: 543 DVMVGLKKGFVGQVPLLGSPDCNVDI 620
           D++VGLKKGFVG VPLLGSP C VDI
Sbjct: 189 DIVVGLKKGFVGPVPLLGSPQCKVDI 214


>emb|CAN72415.1| hypothetical protein VITISV_027904 [Vitis vinifera]
          Length = 991

 Score =  240 bits (613), Expect = 2e-61
 Identities = 125/214 (58%), Positives = 142/214 (66%), Gaps = 9/214 (4%)
 Frame = +3

Query: 6    EHLHTTMTNEKGMA---------PNDMRRFVYTFIVIFLLLAGVTALIVWLVYRPHKPHF 158
            E   TT T +  M          P D RR   TFI I LLLAG+TAL+VWLVYRP +P F
Sbjct: 778  EETQTTQTTQTEMGVEKPPSPYRPKDPRRACCTFIFILLLLAGITALVVWLVYRPQEPQF 837

Query: 159  TVVGAAIYDLNXXXXXXXXXXXXXXVVTRNPNKRVSIYYDHLSAYVSYRNQQITPAVMLP 338
            TV+G AIYDLN              +VTRNPNKRVSIYYD LSA+VSYRNQ ITP  MLP
Sbjct: 838  TVMGVAIYDLNTTSPPLISTNMQFTIVTRNPNKRVSIYYDRLSAFVSYRNQAITPPAMLP 897

Query: 339  PLYQETKTTVALSPIIGGGFVPVSMEVCNGLVMDQAYXXXXXXXXXXXXXKYKAGAIKTK 518
            PLY    +TVALSP++GG  VPVS+EV NGLVMD+AY             K+KAGA  + 
Sbjct: 898  PLYHRKHSTVALSPVLGGEAVPVSLEVANGLVMDEAYGVMGLRLVLLGRLKWKAGAFWSM 957

Query: 519  RYGVFVTCDVMVGLKKGFVGQVPLLGSPDCNVDI 620
             YGV+V CDV+VGLKKG VGQVP+LGSP CNVDI
Sbjct: 958  HYGVYVKCDVLVGLKKGVVGQVPMLGSPXCNVDI 991


>ref|XP_002515080.1| conserved hypothetical protein [Ricinus communis]
           gi|223545560|gb|EEF47064.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 226

 Score =  240 bits (612), Expect = 3e-61
 Identities = 120/201 (59%), Positives = 143/201 (71%), Gaps = 5/201 (2%)
 Frame = +3

Query: 33  EKGMAP-----NDMRRFVYTFIVIFLLLAGVTALIVWLVYRPHKPHFTVVGAAIYDLNXX 197
           +K M+P     +D RR + T I IFLLLAG+   IVWL+YRPHKP FTV+GAAIYDLN  
Sbjct: 26  QKHMSPPPSYKSDPRRTICTVITIFLLLAGLAVFIVWLIYRPHKPRFTVLGAAIYDLNTT 85

Query: 198 XXXXXXXXXXXXVVTRNPNKRVSIYYDHLSAYVSYRNQQITPAVMLPPLYQETKTTVALS 377
                       +VTRNPNKRV+I YD LSAYVSYRNQ ITP V+LPPLY + K+TVALS
Sbjct: 86  SPPFVSASMQFTIVTRNPNKRVAIIYDKLSAYVSYRNQAITPTVVLPPLYHDKKSTVALS 145

Query: 378 PIIGGGFVPVSMEVCNGLVMDQAYXXXXXXXXXXXXXKYKAGAIKTKRYGVFVTCDVMVG 557
           P++GG  VPVS+EV NGLVMD++Y             ++KAG IKT RYGV+V CD+ VG
Sbjct: 146 PVLGGAQVPVSVEVANGLVMDESYGVVALRVVLLGRLRWKAGVIKTGRYGVYVKCDIWVG 205

Query: 558 LKKGFVGQVPLLGSPDCNVDI 620
           LK+G VGQVPLLGSP C VD+
Sbjct: 206 LKRGLVGQVPLLGSPQCKVDV 226


>ref|XP_003633928.1| PREDICTED: protein NDR1-like isoform 2 [Vitis vinifera]
          Length = 202

 Score =  238 bits (607), Expect = 1e-60
 Identities = 120/191 (62%), Positives = 136/191 (71%)
 Frame = +3

Query: 48  PNDMRRFVYTFIVIFLLLAGVTALIVWLVYRPHKPHFTVVGAAIYDLNXXXXXXXXXXXX 227
           P D RR   TFI I LLLAG+TAL+VWLVYRP +P FTV+G AIYDLN            
Sbjct: 12  PKDPRRACCTFIFILLLLAGITALVVWLVYRPQEPQFTVMGVAIYDLNTTSPPLISTNMQ 71

Query: 228 XXVVTRNPNKRVSIYYDHLSAYVSYRNQQITPAVMLPPLYQETKTTVALSPIIGGGFVPV 407
             +VTRNPNKRVSIYYD LSA+VSYRNQ ITP  MLPPLY    +TVALSP++GG  VPV
Sbjct: 72  FTIVTRNPNKRVSIYYDRLSAFVSYRNQAITPPAMLPPLYHRKHSTVALSPVLGGEAVPV 131

Query: 408 SMEVCNGLVMDQAYXXXXXXXXXXXXXKYKAGAIKTKRYGVFVTCDVMVGLKKGFVGQVP 587
           S+EV NGLVMD+AY             K+KAGA  +  YGV+V CDV+VGLKKG VGQVP
Sbjct: 132 SLEVANGLVMDEAYGVMGLRLVLLGRLKWKAGAFWSMHYGVYVKCDVLVGLKKGVVGQVP 191

Query: 588 LLGSPDCNVDI 620
           +LGSP CNVDI
Sbjct: 192 MLGSPLCNVDI 202


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