BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018243
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272572.1| PREDICTED: psbB mRNA maturation factor Mbb1,...   256   1e-66
emb|CAN76674.1| hypothetical protein VITISV_011791 [Vitis vinifera]   256   1e-66
ref|XP_004134505.1| PREDICTED: psbB mRNA maturation factor Mbb1,...   252   3e-65
ref|XP_004165485.1| PREDICTED: psbB mRNA maturation factor Mbb1,...   250   7e-65
ref|XP_002519222.1| pre-mRNA splicing factor, putative [Ricinus ...   248   5e-64

>ref|XP_002272572.1| PREDICTED: psbB mRNA maturation factor Mbb1, chloroplastic [Vitis
           vinifera] gi|296083248|emb|CBI22884.3| unnamed protein
           product [Vitis vinifera]
          Length = 651

 Score =  256 bits (654), Expect = 1e-66
 Identities = 119/136 (87%), Positives = 128/136 (94%)
 Frame = +3

Query: 3   IFRRASELDPRHQPVWIAWGWMEWKEGNIATARQFYQRALQIDSTSESAARCLQAWGVLE 182
           +FRRASELDPRHQPVWIAWGWMEWKEGNIATAR+ YQRAL IDST+ESAARCLQAWGVLE
Sbjct: 406 LFRRASELDPRHQPVWIAWGWMEWKEGNIATAREMYQRALSIDSTTESAARCLQAWGVLE 465

Query: 183 QRIGNLSAARRLFRSSLNINSQSYITWMTWAALEEEQGNSVRAEEIRDLYFQQRTEVIDD 362
           +R GNLSAARRLFRSSLNINSQSYITWMTWA+ EE QGN+VRAEEIRDLYFQQRTEV+DD
Sbjct: 466 ERAGNLSAARRLFRSSLNINSQSYITWMTWASFEENQGNAVRAEEIRDLYFQQRTEVVDD 525

Query: 363 NSWVTGFLDVFDPALE 410
            SWV GFLD+ DPAL+
Sbjct: 526 ASWVMGFLDIIDPALD 541



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 38/135 (28%), Positives = 62/135 (45%)
 Frame = +3

Query: 3   IFRRASELDPRHQPVWIAWGWMEWKEGNIATARQFYQRALQIDSTSESAARCLQAWGVLE 182
           +F  A+  D RH   W  W  +E K+GNI  AR    + L+    +E   + L    +LE
Sbjct: 236 LFDAATVADKRHVAAWHGWAVLELKQGNIKKARHLLAKGLKYGGGNEYIYQTL---ALLE 292

Query: 183 QRIGNLSAARRLFRSSLNINSQSYITWMTWAALEEEQGNSVRAEEIRDLYFQQRTEVIDD 362
            +      AR LF+ +   N +S  +W+ WA LE +Q N+  A ++    F++  +    
Sbjct: 293 AKANRHEQARYLFKQATKCNPKSCASWLAWAQLEMQQENNHTARQL----FEKAVQASPK 348

Query: 363 NSWVTGFLDVFDPAL 407
           N +      VF+  L
Sbjct: 349 NRFAWHVWGVFEANL 363



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 27/94 (28%), Positives = 50/94 (53%)
 Frame = +3

Query: 3   IFRRASELDPRHQPVWIAWGWMEWKEGNIATARQFYQRALQIDSTSESAARCLQAWGVLE 182
           +F++A++ +P+    W+AW  +E ++ N  TARQ +++A+Q    +  A      WGV E
Sbjct: 304 LFKQATKCNPKSCASWLAWAQLEMQQENNHTARQLFEKAVQASPKNRFA---WHVWGVFE 360

Query: 183 QRIGNLSAARRLFRSSLNINSQSYITWMTWAALE 284
             +GN    R+L +    +N +  +   + A LE
Sbjct: 361 ANLGNADVGRKLLKIGHAVNPRDPVLLQSLALLE 394


>emb|CAN76674.1| hypothetical protein VITISV_011791 [Vitis vinifera]
          Length = 629

 Score =  256 bits (654), Expect = 1e-66
 Identities = 119/136 (87%), Positives = 128/136 (94%)
 Frame = +3

Query: 3   IFRRASELDPRHQPVWIAWGWMEWKEGNIATARQFYQRALQIDSTSESAARCLQAWGVLE 182
           +FRRASELDPRHQPVWIAWGWMEWKEGNIATAR+ YQRAL IDST+ESAARCLQAWGVLE
Sbjct: 406 LFRRASELDPRHQPVWIAWGWMEWKEGNIATAREMYQRALSIDSTTESAARCLQAWGVLE 465

Query: 183 QRIGNLSAARRLFRSSLNINSQSYITWMTWAALEEEQGNSVRAEEIRDLYFQQRTEVIDD 362
           +R GNLSAARRLFRSSLNINSQSYITWMTWA+ EE QGN+VRAEEIRDLYFQQRTEV+DD
Sbjct: 466 ERAGNLSAARRLFRSSLNINSQSYITWMTWASFEENQGNAVRAEEIRDLYFQQRTEVVDD 525

Query: 363 NSWVTGFLDVFDPALE 410
            SWV GFLD+ DPAL+
Sbjct: 526 ASWVMGFLDIIDPALD 541



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 38/135 (28%), Positives = 62/135 (45%)
 Frame = +3

Query: 3   IFRRASELDPRHQPVWIAWGWMEWKEGNIATARQFYQRALQIDSTSESAARCLQAWGVLE 182
           +F  A+  D RH   W  W  +E K+GNI  AR    + L+    +E   + L    +LE
Sbjct: 236 LFDAATVADKRHVAAWHGWAVLELKQGNIKKARHLLAKGLKYGGGNEYIYQTLX---LLE 292

Query: 183 QRIGNLSAARRLFRSSLNINSQSYITWMTWAALEEEQGNSVRAEEIRDLYFQQRTEVIDD 362
            +      AR LF+ +   N +S  +W+ WA LE +Q N+  A ++    F++  +    
Sbjct: 293 AKANRHEQARYLFKQATKCNPKSCASWLAWAQLEMQQENNHTARQL----FEKAVQASPK 348

Query: 363 NSWVTGFLDVFDPAL 407
           N +      VF+  L
Sbjct: 349 NRFAWHVWGVFEANL 363



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 27/94 (28%), Positives = 50/94 (53%)
 Frame = +3

Query: 3   IFRRASELDPRHQPVWIAWGWMEWKEGNIATARQFYQRALQIDSTSESAARCLQAWGVLE 182
           +F++A++ +P+    W+AW  +E ++ N  TARQ +++A+Q    +  A      WGV E
Sbjct: 304 LFKQATKCNPKSCASWLAWAQLEMQQENNHTARQLFEKAVQASPKNRFA---WHVWGVFE 360

Query: 183 QRIGNLSAARRLFRSSLNINSQSYITWMTWAALE 284
             +GN    R+L +    +N +  +   + A LE
Sbjct: 361 ANLGNADVGRKLLKIGHAVNPRDPVLLQSLALLE 394


>ref|XP_004134505.1| PREDICTED: psbB mRNA maturation factor Mbb1, chloroplastic-like
           [Cucumis sativus]
          Length = 636

 Score =  252 bits (643), Expect = 3e-65
 Identities = 116/136 (85%), Positives = 128/136 (94%)
 Frame = +3

Query: 3   IFRRASELDPRHQPVWIAWGWMEWKEGNIATARQFYQRALQIDSTSESAARCLQAWGVLE 182
           +FRRASELDP+HQPVWIAWGWMEWKEGNI  AR+ YQRAL IDS SESAARCLQAWGVLE
Sbjct: 397 LFRRASELDPKHQPVWIAWGWMEWKEGNIVKARELYQRALLIDSDSESAARCLQAWGVLE 456

Query: 183 QRIGNLSAARRLFRSSLNINSQSYITWMTWAALEEEQGNSVRAEEIRDLYFQQRTEVIDD 362
           QR+GNLSAARRL+RSSLNINSQSY+TWMTWAALEE+QGN++RAEEIR+LYFQQRTEV+DD
Sbjct: 457 QRVGNLSAARRLYRSSLNINSQSYVTWMTWAALEEDQGNAIRAEEIRNLYFQQRTEVVDD 516

Query: 363 NSWVTGFLDVFDPALE 410
            SWV GFLDV DPAL+
Sbjct: 517 ASWVMGFLDVIDPALD 532



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 33/97 (34%), Positives = 48/97 (49%)
 Frame = +3

Query: 30  PRHQPVWIAWGWMEWKEGNIATARQFYQRALQIDSTSESAARCLQAWGVLEQRIGNLSAA 209
           P     ++A G M  K+   A A+  Y+R  Q  +T    +   Q W VLE R+GN+  A
Sbjct: 167 PEDGRAYVALGKMLGKQMKAAEAKAVYERGCQ--ATQGENSYIWQCWAVLESRMGNIRKA 224

Query: 210 RRLFRSSLNINSQSYITWMTWAALEEEQGNSVRAEEI 320
           R LF ++   N +    W  WA LE +QGN  +A  +
Sbjct: 225 RELFDAATVANKKHIAAWHGWAVLELKQGNIKKARNL 261



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 31/106 (29%), Positives = 52/106 (49%)
 Frame = +3

Query: 3   IFRRASELDPRHQPVWIAWGWMEWKEGNIATARQFYQRALQIDSTSESAARCLQAWGVLE 182
           +F  A+  + +H   W  W  +E K+GNI  AR    + L+    +E   + L    +LE
Sbjct: 227 LFDAATVANKKHIAAWHGWAVLELKQGNIKKARNLLAKGLKYCGGNEYIYQTL---ALLE 283

Query: 183 QRIGNLSAARRLFRSSLNINSQSYITWMTWAALEEEQGNSVRAEEI 320
            +      AR LF+ +   N +S  +W+ WA LE +  N++ A E+
Sbjct: 284 AKSNRYEQARYLFKQATKCNPKSCASWLAWAQLEMQLENNLLAREL 329



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 36/122 (29%), Positives = 62/122 (50%)
 Frame = +3

Query: 3   IFRRASELDPRHQPVWIAWGWMEWKEGNIATARQFYQRALQIDSTSESAARCLQAWGVLE 182
           +F +A +  P+++  W  WG  E   GNI    +  +    ++         LQ+ G+LE
Sbjct: 329 LFEKAIQASPKNRFAWHIWGLFEANTGNIEKGMKLLKIGHVLNPRDPVL---LQSLGLLE 385

Query: 183 QRIGNLSAARRLFRSSLNINSQSYITWMTWAALEEEQGNSVRAEEIRDLYFQQRTEVIDD 362
            +  + S AR LFR +  ++ +    W+ W  +E ++GN V+A   R+LY  QR  +ID 
Sbjct: 386 YKNSSASLARVLFRRASELDPKHQPVWIAWGWMEWKEGNIVKA---RELY--QRALLIDS 440

Query: 363 NS 368
           +S
Sbjct: 441 DS 442


>ref|XP_004165485.1| PREDICTED: psbB mRNA maturation factor Mbb1, chloroplastic-like
           [Cucumis sativus]
          Length = 636

 Score =  250 bits (639), Expect = 7e-65
 Identities = 116/136 (85%), Positives = 127/136 (93%)
 Frame = +3

Query: 3   IFRRASELDPRHQPVWIAWGWMEWKEGNIATARQFYQRALQIDSTSESAARCLQAWGVLE 182
           +FRRASELDP+HQPVWIAWGWMEWKEGNI  AR+ YQRAL IDS SESAARCLQAWGVLE
Sbjct: 397 LFRRASELDPKHQPVWIAWGWMEWKEGNIVKARELYQRALLIDSDSESAARCLQAWGVLE 456

Query: 183 QRIGNLSAARRLFRSSLNINSQSYITWMTWAALEEEQGNSVRAEEIRDLYFQQRTEVIDD 362
           QR GNLSAARRL+RSSLNINSQSY+TWMTWAALEE+QGN++RAEEIR+LYFQQRTEV+DD
Sbjct: 457 QRAGNLSAARRLYRSSLNINSQSYVTWMTWAALEEDQGNAIRAEEIRNLYFQQRTEVVDD 516

Query: 363 NSWVTGFLDVFDPALE 410
            SWV GFLDV DPAL+
Sbjct: 517 ASWVMGFLDVIDPALD 532



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 33/97 (34%), Positives = 48/97 (49%)
 Frame = +3

Query: 30  PRHQPVWIAWGWMEWKEGNIATARQFYQRALQIDSTSESAARCLQAWGVLEQRIGNLSAA 209
           P     ++A G M  K+   A A+  Y+R  Q  +T    +   Q W VLE R+GN+  A
Sbjct: 167 PEDGRAYVALGKMLGKQMKAAEAKAVYERGCQ--ATQGENSYIWQCWAVLESRMGNIRKA 224

Query: 210 RRLFRSSLNINSQSYITWMTWAALEEEQGNSVRAEEI 320
           R LF ++   N +    W  WA LE +QGN  +A  +
Sbjct: 225 RELFDAATVANKKHIAAWHGWAVLELKQGNIKKARNL 261



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 31/106 (29%), Positives = 52/106 (49%)
 Frame = +3

Query: 3   IFRRASELDPRHQPVWIAWGWMEWKEGNIATARQFYQRALQIDSTSESAARCLQAWGVLE 182
           +F  A+  + +H   W  W  +E K+GNI  AR    + L+    +E   + L    +LE
Sbjct: 227 LFDAATVANKKHIAAWHGWAVLELKQGNIKKARNLLAKGLKYCGGNEYIYQTL---ALLE 283

Query: 183 QRIGNLSAARRLFRSSLNINSQSYITWMTWAALEEEQGNSVRAEEI 320
            +      AR LF+ +   N +S  +W+ WA LE +  N++ A E+
Sbjct: 284 AKSNRYEQARYLFKQATKCNPKSCASWLAWAQLEMQLENNLLAREL 329



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 36/122 (29%), Positives = 62/122 (50%)
 Frame = +3

Query: 3   IFRRASELDPRHQPVWIAWGWMEWKEGNIATARQFYQRALQIDSTSESAARCLQAWGVLE 182
           +F +A +  P+++  W  WG  E   GNI    +  +    ++         LQ+ G+LE
Sbjct: 329 LFEKAIQASPKNRFAWHIWGLFEANTGNIEKGMKLLKIGHVLNPRDPVL---LQSLGLLE 385

Query: 183 QRIGNLSAARRLFRSSLNINSQSYITWMTWAALEEEQGNSVRAEEIRDLYFQQRTEVIDD 362
            +  + S AR LFR +  ++ +    W+ W  +E ++GN V+A   R+LY  QR  +ID 
Sbjct: 386 YKNSSASLARVLFRRASELDPKHQPVWIAWGWMEWKEGNIVKA---RELY--QRALLIDS 440

Query: 363 NS 368
           +S
Sbjct: 441 DS 442


>ref|XP_002519222.1| pre-mRNA splicing factor, putative [Ricinus communis]
           gi|223541537|gb|EEF43086.1| pre-mRNA splicing factor,
           putative [Ricinus communis]
          Length = 648

 Score =  248 bits (632), Expect = 5e-64
 Identities = 114/136 (83%), Positives = 126/136 (92%)
 Frame = +3

Query: 3   IFRRASELDPRHQPVWIAWGWMEWKEGNIATARQFYQRALQIDSTSESAARCLQAWGVLE 182
           +FRRASELDP+HQPVWIAWGWMEWKEGNI+ AR+ YQRAL IDS+SESAA+CLQAWGVLE
Sbjct: 417 LFRRASELDPKHQPVWIAWGWMEWKEGNISAARELYQRALSIDSSSESAAKCLQAWGVLE 476

Query: 183 QRIGNLSAARRLFRSSLNINSQSYITWMTWAALEEEQGNSVRAEEIRDLYFQQRTEVIDD 362
           QR+GNLS ARRLFRSSLNINSQSYITWMTWA  EE+QGNSVRAEEIR+LYFQQRTEV+DD
Sbjct: 477 QRVGNLSLARRLFRSSLNINSQSYITWMTWAQFEEDQGNSVRAEEIRNLYFQQRTEVVDD 536

Query: 363 NSWVTGFLDVFDPALE 410
            SWV G LD+ DPAL+
Sbjct: 537 ASWVMGVLDIIDPALD 552



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 39/132 (29%), Positives = 63/132 (47%)
 Frame = +3

Query: 3   IFRRASELDPRHQPVWIAWGWMEWKEGNIATARQFYQRALQIDSTSESAARCLQAWGVLE 182
           +F  A+  D RH   W  W  +E K+GNI  ARQ   + ++    +E   + L    +LE
Sbjct: 247 LFDAATVADKRHIAAWHGWAVLELKQGNIKKARQLLAKGIKFCGGNEYIYQTL---ALLE 303

Query: 183 QRIGNLSAARRLFRSSLNINSQSYITWMTWAALEEEQGNSVRAEEIRDLYFQQRTEVIDD 362
            +      AR LFR +   N +S  +W+ WA +E +Q N++ A E+    FQ+  +    
Sbjct: 304 AKANRYEQARYLFRQATKCNPKSCASWLAWAQVEVQQENNLTAREL----FQKAVQASPK 359

Query: 363 NSWVTGFLDVFD 398
           N +      VF+
Sbjct: 360 NRFAWHVWGVFE 371



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 30/91 (32%), Positives = 48/91 (52%)
 Frame = +3

Query: 48  WIAWGWMEWKEGNIATARQFYQRALQIDSTSESAARCLQAWGVLEQRIGNLSAARRLFRS 227
           ++A G +  K+   A AR  Y++  Q  +T    A   Q W VLE ++GN+  AR LF +
Sbjct: 193 YVALGKILTKQSKTAEARAVYEKGCQ--ATQGENAYIWQCWAVLENKMGNIRRARELFDA 250

Query: 228 SLNINSQSYITWMTWAALEEEQGNSVRAEEI 320
           +   + +    W  WA LE +QGN  +A ++
Sbjct: 251 ATVADKRHIAAWHGWAVLELKQGNIKKARQL 281