BLASTX nr result

ID: Coptis21_contig00018211 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018211
         (857 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001062550.1| Os09g0101200 [Oryza sativa Japonica Group] g...    98   2e-18
emb|CAE05040.1| OSJNBa0049H08.1 [Oryza sativa Japonica Group] gi...    92   1e-16
gb|AAV25287.1| hypothetical protein [Oryza sativa Japonica Group...    90   7e-16
ref|NP_001054942.2| Os05g0219300 [Oryza sativa Japonica Group] g...    90   7e-16
gb|EEC74923.1| hypothetical protein OsI_10871 [Oryza sativa Indi...    89   1e-15

>ref|NP_001062550.1| Os09g0101200 [Oryza sativa Japonica Group]
           gi|113630783|dbj|BAF24464.1| Os09g0101200 [Oryza sativa
           Japonica Group]
          Length = 501

 Score = 98.2 bits (243), Expect = 2e-18
 Identities = 60/173 (34%), Positives = 89/173 (51%), Gaps = 8/173 (4%)
 Frame = -2

Query: 856 EKIKIALEELYKEYTKDSNMMKEVS----DEYELKQGCNVEDSGVMSSASTQKE--DLTF 695
           ++++  L + Y EY K +   +  +    DE+ L    N   S  +  A   K   +L F
Sbjct: 321 KELRTCLNKYYLEYEKIAGSCELPTFIERDEHIL---ANDPSSSSLGGALLGKRCIELAF 377

Query: 694 ALYVKRTA--HTSTSELKRYMSLPPVDLDVNDSFDVLDWWKAQSGNYPNLSAMARDLLTV 521
           A +  +    HT  SEL  Y+  P V  + +++FDVL WWK  +  YP LS MARD L +
Sbjct: 378 AHFASQNIEMHTKKSELDNYLEDPRVHYNSDENFDVLSWWKRNADVYPTLSLMARDFLAI 437

Query: 520 PVSAVPLEYAFDRRERMMNQSWSYLPPELLEASLCLKDWYQAKEGSQDAYSNE 362
           PVS V  E AF    R++ +  + + PE LEAS+CLKDW    +  +  Y+ E
Sbjct: 438 PVSTVSSESAFSAAGRLLGKDRTSMSPETLEASICLKDWIIGFDDDEKGYATE 490


>emb|CAE05040.1| OSJNBa0049H08.1 [Oryza sativa Japonica Group]
           gi|38346748|emb|CAD40758.2| OSJNBa0081G05.11 [Oryza
           sativa Japonica Group] gi|116309610|emb|CAH66665.1|
           OSIGBa0110B10.2 [Oryza sativa Indica Group]
          Length = 557

 Score = 92.4 bits (228), Expect = 1e-16
 Identities = 62/156 (39%), Positives = 88/156 (56%), Gaps = 5/156 (3%)
 Frame = -2

Query: 856 EKIKIALEELYKEYTKDSNMMKEVSDEYELK---QGCNVEDSGVMSSASTQKEDLTFALY 686
           EK+  A + L   Y K    ++  +DE+ L    +G N   S V+     ++E   FALY
Sbjct: 388 EKVGSAEDWLKDYYEKYEGFIRR-NDEHMLSHSHEGSNSVGSPVLGKRKLEEE---FALY 443

Query: 685 V--KRTAHTSTSELKRYMSLPPVDLDVNDSFDVLDWWKAQSGNYPNLSAMARDLLTVPVS 512
              +RTA    SE   Y+    V+ D ++SFDVLDWWK Q+  +P LSAMA+D L +P+S
Sbjct: 444 KSRRRTAWQMKSEFAIYLE-EDVEED-SESFDVLDWWKRQAQKFPVLSAMAKDFLAIPLS 501

Query: 511 AVPLEYAFDRRERMMNQSWSYLPPELLEASLCLKDW 404
            V  E AF  R R++  + S L PE+L+A +C KDW
Sbjct: 502 TVSSESAFSCRGRILGDTRSSLTPEMLDALICAKDW 537


>gb|AAV25287.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|57863883|gb|AAW56923.1| hypothetical protein [Oryza
           sativa Japonica Group]
          Length = 676

 Score = 89.7 bits (221), Expect = 7e-16
 Identities = 60/156 (38%), Positives = 88/156 (56%), Gaps = 5/156 (3%)
 Frame = -2

Query: 856 EKIKIALEELYKEYTKDSNMMKEVSDEYEL---KQGCNVEDSGVMSSASTQKEDLTFALY 686
           EK+  A + L   Y K    ++  +DE+ L   ++G +   S V+     ++E   FALY
Sbjct: 507 EKVGSAEDWLKDYYEKYEGFVRR-NDEHMLSHSREGSSSVGSPVLGKRKLEEE---FALY 562

Query: 685 V--KRTAHTSTSELKRYMSLPPVDLDVNDSFDVLDWWKAQSGNYPNLSAMARDLLTVPVS 512
              +RTA  + SE   Y+    V+ D ++SFDVLDWWK  +  +P LS+MARD L +P+S
Sbjct: 563 KSRRRTARQTKSEFAIYLE-EDVEED-SESFDVLDWWKRHAQKFPVLSSMARDFLAIPLS 620

Query: 511 AVPLEYAFDRRERMMNQSWSYLPPELLEASLCLKDW 404
            V  E AF    R++  + S L PE+LEA +C KDW
Sbjct: 621 TVSSELAFSCGGRILGDTRSSLTPEMLEALICAKDW 656


>ref|NP_001054942.2| Os05g0219300 [Oryza sativa Japonica Group]
            gi|255676140|dbj|BAF16856.2| Os05g0219300 [Oryza sativa
            Japonica Group]
          Length = 772

 Score = 89.7 bits (221), Expect = 7e-16
 Identities = 60/156 (38%), Positives = 88/156 (56%), Gaps = 5/156 (3%)
 Frame = -2

Query: 856  EKIKIALEELYKEYTKDSNMMKEVSDEYEL---KQGCNVEDSGVMSSASTQKEDLTFALY 686
            EK+  A + L   Y K    ++  +DE+ L   ++G +   S V+     ++E   FALY
Sbjct: 555  EKVGSAEDWLKDYYEKYEGFVRR-NDEHMLSHSREGSSSVGSPVLGKRKLEEE---FALY 610

Query: 685  V--KRTAHTSTSELKRYMSLPPVDLDVNDSFDVLDWWKAQSGNYPNLSAMARDLLTVPVS 512
               +RTA  + SE   Y+    V+ D ++SFDVLDWWK  +  +P LS+MARD L +P+S
Sbjct: 611  KSRRRTARQTKSEFAIYLE-EDVEED-SESFDVLDWWKRHAQKFPVLSSMARDFLAIPLS 668

Query: 511  AVPLEYAFDRRERMMNQSWSYLPPELLEASLCLKDW 404
             V  E AF    R++  + S L PE+LEA +C KDW
Sbjct: 669  TVSSELAFSCGGRILGDTRSSLTPEMLEALICAKDW 704


>gb|EEC74923.1| hypothetical protein OsI_10871 [Oryza sativa Indica Group]
          Length = 230

 Score = 89.4 bits (220), Expect = 1e-15
 Identities = 60/156 (38%), Positives = 88/156 (56%), Gaps = 5/156 (3%)
 Frame = -2

Query: 856 EKIKIALEELYKEYTKDSNMMKEVSDEYEL---KQGCNVEDSGVMSSASTQKEDLTFALY 686
           EK+  A + L   Y K    ++  +DE+ L   ++G +   S V+     ++E   FALY
Sbjct: 48  EKVGSAEDWLKDYYEKYEGFVRR-NDEHMLSHSREGSSSVGSPVLGKRKLEEE---FALY 103

Query: 685 V--KRTAHTSTSELKRYMSLPPVDLDVNDSFDVLDWWKAQSGNYPNLSAMARDLLTVPVS 512
              +RTA  + SE   Y+    V+ D ++SFDVLDWWK  +  +P LS+MARD L +P+S
Sbjct: 104 KSRRRTARQTKSEFAIYLE-EDVEED-SESFDVLDWWKRHAQKFPVLSSMARDFLAIPLS 161

Query: 511 AVPLEYAFDRRERMMNQSWSYLPPELLEASLCLKDW 404
            V  E AF    R++  + S L PE+LEA +C KDW
Sbjct: 162 TVSSESAFSCGGRILGDTRSSLTPEMLEALICAKDW 197


Top