BLASTX nr result

ID: Coptis21_contig00018204 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018204
         (1231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329633.1| predicted protein [Populus trichocarpa] gi|2...   131   4e-28
ref|XP_002325055.1| predicted protein [Populus trichocarpa] gi|2...   120   7e-25
ref|XP_002531652.1| conserved hypothetical protein [Ricinus comm...   119   2e-24
emb|CAN66647.1| hypothetical protein VITISV_018785 [Vitis vinifera]   116   1e-23
ref|XP_003555741.1| PREDICTED: uncharacterized protein LOC100777...   113   1e-22

>ref|XP_002329633.1| predicted protein [Populus trichocarpa] gi|222870514|gb|EEF07645.1|
            predicted protein [Populus trichocarpa]
          Length = 301

 Score =  131 bits (329), Expect = 4e-28
 Identities = 102/260 (39%), Positives = 143/260 (55%), Gaps = 8/260 (3%)
 Frame = +3

Query: 315  QEDSEADALSFCDLPLSGEYCADNSDSKQNHDLQTSRDQELFEFFNVVSTGTLSSAEDIV 494
            QE+ E +ALS CD PL G        +  N    +S   E FEFF+ VS+  +SSAEDI+
Sbjct: 23   QEEEEEEALSLCDFPLQGRDKESPEIAAHNSARPSSEPAEFFEFFSDVSS-EMSSAEDII 81

Query: 495  FCGKVFPYRSPPLSNITNKTTQCTEDQRLDIPRKSFLHRKSGSLNDVQRSQS---STKER 665
            F GK+ P+  P  +       Q  EDQ+    R SF  R+  SL+++Q S S   STK  
Sbjct: 82   FHGKLVPFIEPYFT----PQNQSKEDQQ----RFSF-RRRCDSLSELQSSASRSNSTKNN 132

Query: 666  --LTRSTKSLDYRKLHRNSSSKLTRTDSLVQSDERISSGTCFGKCNFSEQRAPSARPRRR 839
              L R+++SLDYR L R  SSK    +  ++    + S    G     E +  +++PR  
Sbjct: 133  IALMRNSRSLDYRNLERFPSSKKFSPELDIERSSSLKSIHARG-----EVKRTTSKPRWY 187

Query: 840  VLMFGLVKAPTEMEMKDIRNRQSRQMPS-PLFPAF--DGEETVSVKRVGGKGTWRLLRVL 1010
            +LMFG+VK PTEM++ DI++RQ R+  S  +FP    DG++    +    KG+ RLLRVL
Sbjct: 188  LLMFGVVKPPTEMDLSDIKSRQVRRNSSMTMFPPVDTDGKKAPVSQSSISKGSCRLLRVL 247

Query: 1011 SCKGKANGVITASISCTPQV 1070
            SCK  A+ V  A+   TPQV
Sbjct: 248  SCKDPAS-VAVATSFLTPQV 266


>ref|XP_002325055.1| predicted protein [Populus trichocarpa] gi|222866489|gb|EEF03620.1|
            predicted protein [Populus trichocarpa]
          Length = 279

 Score =  120 bits (301), Expect = 7e-25
 Identities = 94/261 (36%), Positives = 144/261 (55%), Gaps = 8/261 (3%)
 Frame = +3

Query: 291  KQKGDNEFQEDSEADALSFCDLPLSGEYCADNSDSKQNHDLQTSRDQELFEFFNVVSTGT 470
            +Q+  +E + + E +ALS CD PL G      + +  +    +S   E FEFF+ +S+  
Sbjct: 14   EQEHGHEGEGEEEEEALSLCDFPLEGRNEESPNIAFHSGARSSSEPAEFFEFFSDLSS-E 72

Query: 471  LSSAEDIVFCGKVFPYRSPPLSNITNKTTQCTEDQRLDIPRKSFLHRKSGSLNDVQRS-- 644
            + SAEDI+F GK+ P + P  +       Q  ED++    R SF  R+  SL+++Q S  
Sbjct: 73   MRSAEDIIFRGKLVPVKEPYFT----PQNQSKEDKQ----RISF-RRRCESLSELQSSVC 123

Query: 645  -QSSTKER--LTRSTKSLDYRKLHRNSSSKLTRTDSLVQSDERISSGTCFGKCNFSEQRA 815
              SS+K    L R+++SLDYRKL R SSSK   ++  ++     SS +       S+ + 
Sbjct: 124  RSSSSKNNIGLMRNSRSLDYRKLERFSSSKKCSSELDIER----SSSSLKSIHAKSDVKK 179

Query: 816  PSARPRRRVLMFGLVKAPTEMEMKDIRNRQSRQMPS-PLFPAF--DGEETVSVKRVGGKG 986
              ++PR  +LMFG+VK PTEM + DI++RQ R+  S  +FP    DG++    +    KG
Sbjct: 180  TGSKPRWYLLMFGVVKPPTEMNLSDIKSRQGRRNYSVSMFPPVDTDGKKAPVNQSCISKG 239

Query: 987  TWRLLRVLSCKGKANGVITAS 1049
            + RLLRVLSCK  A+  +  S
Sbjct: 240  SCRLLRVLSCKDPASVAVATS 260


>ref|XP_002531652.1| conserved hypothetical protein [Ricinus communis]
            gi|223528710|gb|EEF30722.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 244

 Score =  119 bits (298), Expect = 2e-24
 Identities = 85/256 (33%), Positives = 137/256 (53%), Gaps = 2/256 (0%)
 Frame = +3

Query: 303  DNEFQEDSEADALSFCDLPLSGEYCADNSDSKQNHDLQTSRDQELFEFFNVVSTGTLSSA 482
            D E +++ E +ALS CDLPL  +       S+ +    +S   ELFEFF+  S+  + SA
Sbjct: 10   DPEEEDEEEEEALSLCDLPLEDDNEIPEMASRSHSRRSSSEPSELFEFFSNFSS-EMCSA 68

Query: 483  EDIVFCGKVFPYR--SPPLSNITNKTTQCTEDQRLDIPRKSFLHRKSGSLNDVQRSQSST 656
            EDI+FCGK+ P++  SPP            + + +   R+S        L+    S+S++
Sbjct: 69   EDIIFCGKLIPFKDLSPPHQQ---------DKRHISFRRRS---ESLSGLHSSSVSRSNS 116

Query: 657  KERLTRSTKSLDYRKLHRNSSSKLTRTDSLVQSDERISSGTCFGKCNFSEQRAPSARPRR 836
               + R+++SLDY +L R  +SK T      +SD  +   +   + N +++     +PR 
Sbjct: 117  INNMMRNSRSLDYSRLERFPTSKTT-----TESDNSMERNSSL-RSNMAKRTV--VKPRW 168

Query: 837  RVLMFGLVKAPTEMEMKDIRNRQSRQMPSPLFPAFDGEETVSVKRVGGKGTWRLLRVLSC 1016
             VLMFG+VK PTEM ++DI++RQ R+    +       +TV    V GKG+ +LL+VLSC
Sbjct: 169  YVLMFGVVKPPTEMGLRDIKSRQVRRNSLNMMLPPPVADTVKKPPV-GKGSCKLLKVLSC 227

Query: 1017 KGKANGVITASISCTP 1064
            +  A+  +T  + C P
Sbjct: 228  RDPASVAVTTPL-CVP 242


>emb|CAN66647.1| hypothetical protein VITISV_018785 [Vitis vinifera]
          Length = 273

 Score =  116 bits (290), Expect = 1e-23
 Identities = 94/274 (34%), Positives = 135/274 (49%), Gaps = 10/274 (3%)
 Frame = +3

Query: 267  MTAIEDITKQKGDNEFQEDSEADALSFCDLPLSGEYCADNSDSKQNHDLQTSRDQELFEF 446
            M A + I K   D+    D   + LS CDLP+ G+   D  DS ++ D  +S DQE FEF
Sbjct: 1    MVAEDPIQKTWEDDSSDLDESVETLSLCDLPMYGDIGGDWDDSFKD-DQSSSSDQEFFEF 59

Query: 447  FNVVSTGTLS-SAEDIVFCGKVFPYRSPPLSNITNKTTQCTEDQRLDIPRKSFLHRKSGS 623
            F+   T + S +AE+IVFCGK+  Y+  P+   T K    TE ++   P+K  L      
Sbjct: 60   FSEDFTASTSPAAENIVFCGKLITYKKLPVCEDTQKLEDKTEKKQQQ-PKKGGL------ 112

Query: 624  LNDVQRSQSSTKERLTRSTKSLDYR-----KLHRNSSSKLTRTDSLVQSDERISSGTCFG 788
               +QR   S K      +KS+D       KL +  SSK          +  +S      
Sbjct: 113  ---LQRGLKSFKRGKESRSKSMDGSHGKGLKLQQAPSSK--SLPDAAAENYGLSPRKSAD 167

Query: 789  KCNFSEQRAP--SARPRRR-VLMFGLVKAPTEMEMKDIRNRQSRQMPSPLFPAFDGEETV 959
            K +F+  R P  +  P+ +  + FG+V+ PTEME++DI+NRQSR+ PS L  + +  +  
Sbjct: 168  KYDFTFPRMPIMTYPPKSQWQMFFGMVRIPTEMELRDIKNRQSRRTPSMLVTSPEEGKKG 227

Query: 960  SVKRVGGKGTWRLLRVLSCKGK-ANGVITASISC 1058
               +  GK  W LL+ L C    AN V  AS SC
Sbjct: 228  GGHKRKGKSLWGLLKALGCSSSHANTVAKASPSC 261


>ref|XP_003555741.1| PREDICTED: uncharacterized protein LOC100777782 [Glycine max]
          Length = 254

 Score =  113 bits (282), Expect = 1e-22
 Identities = 84/271 (30%), Positives = 134/271 (49%), Gaps = 18/271 (6%)
 Frame = +3

Query: 291  KQKGDNEFQEDSEAD---ALSFCDLPLSGEYCADNSDSKQNHDLQTSRDQ-----ELFEF 446
            K   D E QE+ E +   ALS CDLPL+      + D      +           E+F  
Sbjct: 2    KDSDDMESQEEEEEEREEALSLCDLPLNRNSRTPSLDDMSFKKILRPSSLPDHAGEIFNG 61

Query: 447  FNVVSTGTLSSAEDIVFCGKVFPYRSP-PLSNITNKTTQCTEDQRLDIPRKSFLHRKSGS 623
            F+  S+  +  A+DI+FCGK+ P+++  PL N+        E+++    R     R+S S
Sbjct: 62   FSSSSSSDMCPADDIIFCGKLVPFKAEQPLKNLI-----AAEEEKSPARR-----RRSES 111

Query: 624  LNDVQRSQS-----STKERLTRSTKSLDYRKLHRNSSSKLTRTDS---LVQSDERISSGT 779
            L+ V RS S      ++  + R++KSLDY +L  +++ ++ R  S   +V  +  +   T
Sbjct: 112  LSSVTRSNSVSTFTGSRHLMMRNSKSLDYSRLRESAAPEVDRNSSSRSVVPPEAAVKKAT 171

Query: 780  CFGKCNFSEQRAPSARPRRRVLMFGLVKAPTEMEMKDIRNRQSRQMP-SPLFPAFDGEET 956
                           +PR   LMFG +K P EME+ D++NRQ R+ P S +F   D    
Sbjct: 172  ---------------KPRWYSLMFGTMKIPPEMELSDMKNRQVRRNPSSTMFLTADSGGK 216

Query: 957  VSVKRVGGKGTWRLLRVLSCKGKANGVITAS 1049
            ++V R  GK +WR+L+ LSCK  ++  +T S
Sbjct: 217  MAVNRSHGKVSWRILKALSCKDHSSVAVTTS 247


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