BLASTX nr result

ID: Coptis21_contig00018203 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018203
         (820 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277376.1| PREDICTED: uncharacterized protein LOC100262...   378   e-102
emb|CBI33855.3| unnamed protein product [Vitis vinifera]              378   e-102
ref|XP_002527660.1| ring finger protein, putative [Ricinus commu...   372   e-101
ref|XP_004136196.1| PREDICTED: E3 ubiquitin-protein ligase RNF14...   372   e-101
ref|XP_002893719.1| predicted protein [Arabidopsis lyrata subsp....   357   1e-96

>ref|XP_002277376.1| PREDICTED: uncharacterized protein LOC100262589 [Vitis vinifera]
          Length = 868

 Score =  378 bits (970), Expect = e-102
 Identities = 171/269 (63%), Positives = 211/269 (78%)
 Frame = -3

Query: 815  LSHLGFNKEIALGPYNMPDAGDRRAFSGSVSPEVDMPSMLKYNDDKCVEVFCENLHECCI 636
            LS+LGF+KEI LGPYNM ++ DRRA SGSVS +VD+PSM  YND+K  E F +N HECCI
Sbjct: 503  LSYLGFDKEIVLGPYNMGNSEDRRAISGSVSLDVDIPSMKSYNDEKRHENFSKNFHECCI 562

Query: 635  CLSEHAGTEFIRLPCKHFFCWKCMETYSRIHVKEGTVYKLVCPDAECDGMVPPGLLKRLL 456
            C +E+AGTEFI+LPC+HFFCWKCM+TYS +HVKEGT  +L+CP+ +C  MVPP LLKRLL
Sbjct: 563  CFTEYAGTEFIKLPCQHFFCWKCMKTYSEMHVKEGTGSQLLCPETKCRAMVPPVLLKRLL 622

Query: 455  ARDDFERWESLLLQKTLDSMSDVVYCPRCETACLEDGDSHAQCLKCFFSFCILCSEQRHV 276
              ++FE WESL+LQKTL+SMSD+ YCPRCET C+ED D HAQC KCFFSFC LC ++RHV
Sbjct: 623  GDEEFEHWESLMLQKTLESMSDMTYCPRCETICIEDEDQHAQCSKCFFSFCTLCRDRRHV 682

Query: 275  GTTCMGPEKRLQTLMELKELRDLKEEQSYEIQELNNEILSLKIIFCDAKQCPSCNIAISR 96
            G  CM PE +L  L   +    LK+EQ  + +E+ NE+LS+K I  DAKQCPSC +AISR
Sbjct: 683  GLECMTPEVKLHILQGRQHSSQLKDEQRKKEREMINELLSVKEILRDAKQCPSCKMAISR 742

Query: 95   IEGCNRMQCSNCGQAFCWGCNKALSGNIH 9
             EGCN+M C+NCGQ FC+ CN+A+ G  H
Sbjct: 743  TEGCNKMVCNNCGQYFCYRCNQAIDGYEH 771


>emb|CBI33855.3| unnamed protein product [Vitis vinifera]
          Length = 662

 Score =  378 bits (970), Expect = e-102
 Identities = 171/269 (63%), Positives = 211/269 (78%)
 Frame = -3

Query: 815  LSHLGFNKEIALGPYNMPDAGDRRAFSGSVSPEVDMPSMLKYNDDKCVEVFCENLHECCI 636
            LS+LGF+KEI LGPYNM ++ DRRA SGSVS +VD+PSM  YND+K  E F +N HECCI
Sbjct: 297  LSYLGFDKEIVLGPYNMGNSEDRRAISGSVSLDVDIPSMKSYNDEKRHENFSKNFHECCI 356

Query: 635  CLSEHAGTEFIRLPCKHFFCWKCMETYSRIHVKEGTVYKLVCPDAECDGMVPPGLLKRLL 456
            C +E+AGTEFI+LPC+HFFCWKCM+TYS +HVKEGT  +L+CP+ +C  MVPP LLKRLL
Sbjct: 357  CFTEYAGTEFIKLPCQHFFCWKCMKTYSEMHVKEGTGSQLLCPETKCRAMVPPVLLKRLL 416

Query: 455  ARDDFERWESLLLQKTLDSMSDVVYCPRCETACLEDGDSHAQCLKCFFSFCILCSEQRHV 276
              ++FE WESL+LQKTL+SMSD+ YCPRCET C+ED D HAQC KCFFSFC LC ++RHV
Sbjct: 417  GDEEFEHWESLMLQKTLESMSDMTYCPRCETICIEDEDQHAQCSKCFFSFCTLCRDRRHV 476

Query: 275  GTTCMGPEKRLQTLMELKELRDLKEEQSYEIQELNNEILSLKIIFCDAKQCPSCNIAISR 96
            G  CM PE +L  L   +    LK+EQ  + +E+ NE+LS+K I  DAKQCPSC +AISR
Sbjct: 477  GLECMTPEVKLHILQGRQHSSQLKDEQRKKEREMINELLSVKEILRDAKQCPSCKMAISR 536

Query: 95   IEGCNRMQCSNCGQAFCWGCNKALSGNIH 9
             EGCN+M C+NCGQ FC+ CN+A+ G  H
Sbjct: 537  TEGCNKMVCNNCGQYFCYRCNQAIDGYEH 565


>ref|XP_002527660.1| ring finger protein, putative [Ricinus communis]
           gi|223532965|gb|EEF34731.1| ring finger protein,
           putative [Ricinus communis]
          Length = 578

 Score =  372 bits (956), Expect = e-101
 Identities = 175/270 (64%), Positives = 208/270 (77%)
 Frame = -3

Query: 818 SLSHLGFNKEIALGPYNMPDAGDRRAFSGSVSPEVDMPSMLKYNDDKCVEVFCENLHECC 639
           SLSHLG ++EI LGPY   +  D RA SGSVSPEVD+PS+  YND+KC E F  NLHEC 
Sbjct: 146 SLSHLGADQEITLGPYVHSE--DMRAVSGSVSPEVDIPSLRSYNDEKCHENFRLNLHECL 203

Query: 638 ICLSEHAGTEFIRLPCKHFFCWKCMETYSRIHVKEGTVYKLVCPDAECDGMVPPGLLKRL 459
           IC SE+ G++FIRLPC+HFFC  CM+TY  IHV EGTV KL CPDA+C GMVPPGLLK+L
Sbjct: 204 ICYSEYTGSDFIRLPCQHFFCCTCMKTYCGIHVTEGTVNKLQCPDAKCGGMVPPGLLKQL 263

Query: 458 LARDDFERWESLLLQKTLDSMSDVVYCPRCETACLEDGDSHAQCLKCFFSFCILCSEQRH 279
           L  +++ERWESL+LQKTLDSMSDV YCPRCET C+ED D HAQC KCFFSFC LC E+ H
Sbjct: 264 LGDEEYERWESLMLQKTLDSMSDVAYCPRCETPCIEDEDQHAQCSKCFFSFCTLCRERLH 323

Query: 278 VGTTCMGPEKRLQTLMELKELRDLKEEQSYEIQELNNEILSLKIIFCDAKQCPSCNIAIS 99
           VG  C+ PE RL+ L E + L  LK++Q    +E+ NE+LSLK I  DAKQCPSC +AIS
Sbjct: 324 VGEVCLTPELRLRVLEERQNLSQLKDKQKLREREMINELLSLKEIHRDAKQCPSCKMAIS 383

Query: 98  RIEGCNRMQCSNCGQAFCWGCNKALSGNIH 9
           R EGCN+M C+NCG+ FC+ CNKA+ G  H
Sbjct: 384 RTEGCNKMVCNNCGRYFCYRCNKAIDGYDH 413


>ref|XP_004136196.1| PREDICTED: E3 ubiquitin-protein ligase RNF14-like [Cucumis sativus]
            gi|449525814|ref|XP_004169911.1| PREDICTED: E3
            ubiquitin-protein ligase RNF14-like [Cucumis sativus]
          Length = 638

 Score =  372 bits (955), Expect = e-101
 Identities = 170/270 (62%), Positives = 212/270 (78%)
 Frame = -3

Query: 818  SLSHLGFNKEIALGPYNMPDAGDRRAFSGSVSPEVDMPSMLKYNDDKCVEVFCENLHECC 639
            SL++L  +KEI LGPY+   +GD RA SG VSPEVD+P+++ Y++ +  E FC NL ECC
Sbjct: 276  SLAYLQSDKEIMLGPYDKGHSGDTRAVSGIVSPEVDVPAIINYDNQRRDEDFCMNLQECC 335

Query: 638  ICLSEHAGTEFIRLPCKHFFCWKCMETYSRIHVKEGTVYKLVCPDAECDGMVPPGLLKRL 459
            ICLS++AG +F+RLPCKH+FCWKCMETYS +HVKEGTV KL CPDA+CD MVPPGLLK+L
Sbjct: 336  ICLSQYAGAKFVRLPCKHYFCWKCMETYSSMHVKEGTVSKLNCPDAKCDVMVPPGLLKQL 395

Query: 458  LARDDFERWESLLLQKTLDSMSDVVYCPRCETACLEDGDSHAQCLKCFFSFCILCSEQRH 279
            L  ++FERWES++L KTL+SMSDVVYCPRCET CLED D  AQC KC+FSFC LCSE+RH
Sbjct: 396  LGDEEFERWESMMLTKTLESMSDVVYCPRCETPCLEDVDHDAQCSKCYFSFCTLCSERRH 455

Query: 278  VGTTCMGPEKRLQTLMELKELRDLKEEQSYEIQELNNEILSLKIIFCDAKQCPSCNIAIS 99
            VG  CM PE +L+ L E +    L  EQ  + +E+ NE++S+K I  DAKQCPSC +AIS
Sbjct: 456  VGIECMTPEMKLRLLEERQNSSQLGSEQRRKEREMINELISVKEILRDAKQCPSCKMAIS 515

Query: 98   RIEGCNRMQCSNCGQAFCWGCNKALSGNIH 9
            R EGCN+M C+NCGQ FC+ C+KA+ G  H
Sbjct: 516  RTEGCNKMVCNNCGQYFCYRCSKAIDGYDH 545


>ref|XP_002893719.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297339561|gb|EFH69978.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 682

 Score =  357 bits (917), Expect = 1e-96
 Identities = 161/270 (59%), Positives = 207/270 (76%)
 Frame = -3

Query: 818  SLSHLGFNKEIALGPYNMPDAGDRRAFSGSVSPEVDMPSMLKYNDDKCVEVFCENLHECC 639
            S+SHLGF+KEI LGPY +  + D+RA SGS SP+ D+P +  Y+D+K  E F ++LHECC
Sbjct: 314  SISHLGFDKEIFLGPYGVTCSRDKRAVSGSRSPDSDIPYIRSYDDEKRHESFLQSLHECC 373

Query: 638  ICLSEHAGTEFIRLPCKHFFCWKCMETYSRIHVKEGTVYKLVCPDAECDGMVPPGLLKRL 459
            IC +E AG +F++LPC+HFFC KCM+TY+ IHV EGTV KL+CPD++C  +VPPG+LKRL
Sbjct: 374  ICFTESAGIDFVKLPCQHFFCLKCMKTYTDIHVSEGTVNKLMCPDSKCGEIVPPGILKRL 433

Query: 458  LARDDFERWESLLLQKTLDSMSDVVYCPRCETACLEDGDSHAQCLKCFFSFCILCSEQRH 279
            L  + +ERWE+L+LQKTL+SM+DV YCPRCET C+ED +  A C KC+FSFC LC E+RH
Sbjct: 434  LGEEAYERWETLMLQKTLESMTDVAYCPRCETPCIEDEEQLALCFKCYFSFCTLCKEKRH 493

Query: 278  VGTTCMGPEKRLQTLMELKELRDLKEEQSYEIQELNNEILSLKIIFCDAKQCPSCNIAIS 99
            VG  CM PE RLQ L E +    L EEQ  + +E+ NEI+S+K+I   AKQCPSC IAIS
Sbjct: 494  VGVACMSPELRLQILQERQGSSRLGEEQRRKEKEMINEIMSVKVIMKSAKQCPSCKIAIS 553

Query: 98   RIEGCNRMQCSNCGQAFCWGCNKALSGNIH 9
            R  GCN+M C+NCGQ FC+ CNKA++G  H
Sbjct: 554  RTGGCNKMVCNNCGQYFCYRCNKAITGYEH 583


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