BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018188
         (1508 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555873.1| PREDICTED: lipoyl synthase, chloroplastic-li...   575   e-162
ref|XP_002270080.1| PREDICTED: lipoyl synthase, chloroplastic [V...   566   e-159
ref|XP_002319912.1| predicted protein [Populus trichocarpa] gi|3...   565   e-158
ref|XP_004147097.1| PREDICTED: lipoyl synthase, chloroplastic-li...   563   e-158
ref|NP_568196.1| lipoyl synthase [Arabidopsis thaliana] gi|30819...   563   e-158

>ref|XP_003555873.1| PREDICTED: lipoyl synthase, chloroplastic-like [Glycine max]
          Length = 364

 Score =  575 bits (1483), Expect = e-162
 Identities = 294/353 (83%), Positives = 312/353 (88%), Gaps = 6/353 (1%)
 Frame = -1

Query: 1403 SLTKPITIPTHSKPKSLIHYYSRPT-RI-----NIVRAEAVDYTYPGGGMGVHTGRDPNV 1242
            SL  P +I T S P    H ++ P+ RI     ++   + V   YPGG +G HTGRDPN 
Sbjct: 5    SLYTPPSI-TFSTPSPKRHRFAPPSWRIRCDASSVSVEQKVVGPYPGG-LGPHTGRDPNA 62

Query: 1241 KKPAWLRQKALQGERFLEVKDSLSKLKLNTVCEEAQCPNIGECWNGGGDGIATATIMLLG 1062
            KKP WLRQKA QGERF E+K+SLS LKLNTVCEEAQCPNIGECWNGGGDGIATATIMLLG
Sbjct: 63   KKPEWLRQKAPQGERFQEIKESLSHLKLNTVCEEAQCPNIGECWNGGGDGIATATIMLLG 122

Query: 1061 DTCTRGCRFCAVKTSRNPSPPDPMEPENTAKAIASWGVDYIVLTSVDRDDLPDGGSGHFA 882
            DTCTRGCRFCAVKTSRNP P DPMEPENTAKAIASWGVDYIVLTSVDRDDLPDGGSGHFA
Sbjct: 123  DTCTRGCRFCAVKTSRNPPPADPMEPENTAKAIASWGVDYIVLTSVDRDDLPDGGSGHFA 182

Query: 881  RTVEAMKSLSPHIMVECLTSDFRGDLNAVTSLVYSGLDVFAHNVETVKRLQRIVRDPRAG 702
            +TV+AMK+L P IMVECLTSDFRGDL AV +LV+SGLDVFAHN+ETVKRLQRIVRDPRAG
Sbjct: 183  QTVKAMKNLKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAG 242

Query: 701  YEQSLSVLKHAKLCKEGMITKTSIMLGLGESDEEVKEAMADLRAIDVDILTLGQYLQPTP 522
            YEQSLSVLKHAK  KEGMITKTSIMLGLGESD+EVKEAMADLRAIDVDILTLGQYLQPTP
Sbjct: 243  YEQSLSVLKHAKHSKEGMITKTSIMLGLGESDDEVKEAMADLRAIDVDILTLGQYLQPTP 302

Query: 521  LHLTVKEYVTPEKFTFWKDYGESIGFRYVASGPLVRSSYRAGELFVKTMVREK 363
            LHLTVKEYVTPEKF FWK+YGESIGFRYVASGPLVRSSYRAGELFVKTMVREK
Sbjct: 303  LHLTVKEYVTPEKFDFWKEYGESIGFRYVASGPLVRSSYRAGELFVKTMVREK 355


>ref|XP_002270080.1| PREDICTED: lipoyl synthase, chloroplastic [Vitis vinifera]
            gi|297742716|emb|CBI35350.3| unnamed protein product
            [Vitis vinifera]
          Length = 372

 Score =  566 bits (1458), Expect = e-159
 Identities = 283/353 (80%), Positives = 306/353 (86%), Gaps = 2/353 (0%)
 Frame = -1

Query: 1391 PITIPTHSKPKSLIHYYSRPT-RINIVRAEAVDYTYPGGGM-GVHTGRDPNVKKPAWLRQ 1218
            P+  P  S   S  H Y+  +  + IV + +         + G  TGRDPNVKKPAWLRQ
Sbjct: 18   PLKTPPKSSSHSSTHCYNHTSWGLRIVGSSSSSSNTESKSLNGAFTGRDPNVKKPAWLRQ 77

Query: 1217 KALQGERFLEVKDSLSKLKLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCR 1038
            +A QGERF EVK SLS L LNTVC+EAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCR
Sbjct: 78   RAAQGERFEEVKQSLSHLNLNTVCQEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCR 137

Query: 1037 FCAVKTSRNPSPPDPMEPENTAKAIASWGVDYIVLTSVDRDDLPDGGSGHFARTVEAMKS 858
            FCAVKTSRNP+PPDPMEPENTAKAIASWGVDYIVLTSVDRDDLPDGGSGHFARTV+AMK 
Sbjct: 138  FCAVKTSRNPAPPDPMEPENTAKAIASWGVDYIVLTSVDRDDLPDGGSGHFARTVKAMKK 197

Query: 857  LSPHIMVECLTSDFRGDLNAVTSLVYSGLDVFAHNVETVKRLQRIVRDPRAGYEQSLSVL 678
              P IMVECLTSDFRGDL+AV +LV+SGLDVFAHN+ETVKRLQRIVRDPRAGYEQSLSVL
Sbjct: 198  FKPEIMVECLTSDFRGDLSAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLSVL 257

Query: 677  KHAKLCKEGMITKTSIMLGLGESDEEVKEAMADLRAIDVDILTLGQYLQPTPLHLTVKEY 498
            KHAK  K GMITK+SIMLGLGESD+E+KEAMADLRAIDVDILTLGQYLQPTPLHLTVKEY
Sbjct: 258  KHAKHSKVGMITKSSIMLGLGESDDELKEAMADLRAIDVDILTLGQYLQPTPLHLTVKEY 317

Query: 497  VTPEKFTFWKDYGESIGFRYVASGPLVRSSYRAGELFVKTMVREKNISNTTGS 339
            VTPEKF FWK+YGESIGFRYVASGPLVRSSYRAGELFVK+MVRE+  ++ T S
Sbjct: 318  VTPEKFAFWKEYGESIGFRYVASGPLVRSSYRAGELFVKSMVRERASASATAS 370


>ref|XP_002319912.1| predicted protein [Populus trichocarpa]
            gi|308191445|sp|B9I666.1|LISC1_POPTR RecName: Full=Lipoyl
            synthase 1, chloroplastic; AltName: Full=Lipoate synthase
            1; Short=LS 1; Short=Lip-syn 1; AltName: Full=Lipoate
            synthase, plastidial 1; Short=LIP1p 1; AltName:
            Full=Lipoic acid synthase 1; Flags: Precursor
            gi|222858288|gb|EEE95835.1| predicted protein [Populus
            trichocarpa]
          Length = 376

 Score =  565 bits (1456), Expect = e-158
 Identities = 289/366 (78%), Positives = 311/366 (84%), Gaps = 20/366 (5%)
 Frame = -1

Query: 1403 SLTKP---ITIPTHSKPKSLIHYYSRPTRINIVRAEAVDYT--------YP--------- 1284
            SL+KP   ++IP    PKS   +    ++I   R E+VDY         +P         
Sbjct: 5    SLSKPSFSLSIPIPQPPKSKSSFLCSYSKI---RCESVDYPSSSKIDAKHPQISSINSNG 61

Query: 1283 GGGMGVHTGRDPNVKKPAWLRQKALQGERFLEVKDSLSKLKLNTVCEEAQCPNIGECWNG 1104
            GG MG +TGRDPNVKKP WLRQKA QGER+ EVK+SLS+LKLNTVC+EAQCPNIGECWNG
Sbjct: 62   GGKMGSYTGRDPNVKKPEWLRQKAPQGERYDEVKESLSRLKLNTVCQEAQCPNIGECWNG 121

Query: 1103 GGDGIATATIMLLGDTCTRGCRFCAVKTSRNPSPPDPMEPENTAKAIASWGVDYIVLTSV 924
            GGDGIATATIM+LGDTCTRGCRFCAVKTSRNP PPDPMEP NTA AIASWGVDYIV+TSV
Sbjct: 122  GGDGIATATIMVLGDTCTRGCRFCAVKTSRNPPPPDPMEPLNTALAIASWGVDYIVITSV 181

Query: 923  DRDDLPDGGSGHFARTVEAMKSLSPHIMVECLTSDFRGDLNAVTSLVYSGLDVFAHNVET 744
            DRDDLPDGGSGHFA+TV AMK L P IMVECLTSDFRGDL AV +LV+SGLDVFAHNVET
Sbjct: 182  DRDDLPDGGSGHFAQTVRAMKELKPEIMVECLTSDFRGDLKAVDTLVHSGLDVFAHNVET 241

Query: 743  VKRLQRIVRDPRAGYEQSLSVLKHAKLCKEGMITKTSIMLGLGESDEEVKEAMADLRAID 564
            VKRLQRIVRDPRAGYEQSLSVLKHAK+ K+GMITKTSIMLGLGESD EVKEAMADLRAI 
Sbjct: 242  VKRLQRIVRDPRAGYEQSLSVLKHAKISKKGMITKTSIMLGLGESDNEVKEAMADLRAIG 301

Query: 563  VDILTLGQYLQPTPLHLTVKEYVTPEKFTFWKDYGESIGFRYVASGPLVRSSYRAGELFV 384
            VDILT GQYLQPTPLHLTVKEYVTPEKF FWK+YGESIGFRYVASGPLVRSSYRAGELFV
Sbjct: 302  VDILTFGQYLQPTPLHLTVKEYVTPEKFAFWKEYGESIGFRYVASGPLVRSSYRAGELFV 361

Query: 383  KTMVRE 366
            KTMV+E
Sbjct: 362  KTMVKE 367


>ref|XP_004147097.1| PREDICTED: lipoyl synthase, chloroplastic-like [Cucumis sativus]
            gi|449526690|ref|XP_004170346.1| PREDICTED: lipoyl
            synthase, chloroplastic-like [Cucumis sativus]
          Length = 398

 Score =  563 bits (1450), Expect = e-158
 Identities = 275/314 (87%), Positives = 296/314 (94%)
 Frame = -1

Query: 1289 YPGGGMGVHTGRDPNVKKPAWLRQKALQGERFLEVKDSLSKLKLNTVCEEAQCPNIGECW 1110
            YPGG MG +TGRDP+VKKP WLRQ+A QGE+F EVKDSLS+L LNTVCEEAQCPNIGECW
Sbjct: 84   YPGG-MGPYTGRDPSVKKPGWLRQRAPQGEKFQEVKDSLSRLNLNTVCEEAQCPNIGECW 142

Query: 1109 NGGGDGIATATIMLLGDTCTRGCRFCAVKTSRNPSPPDPMEPENTAKAIASWGVDYIVLT 930
            NGGGDGIATATIMLLGDTCTRGCRFCAVKTSRNP+PPDPMEP NTA AIASWGVDYIVLT
Sbjct: 143  NGGGDGIATATIMLLGDTCTRGCRFCAVKTSRNPAPPDPMEPLNTATAIASWGVDYIVLT 202

Query: 929  SVDRDDLPDGGSGHFARTVEAMKSLSPHIMVECLTSDFRGDLNAVTSLVYSGLDVFAHNV 750
            SVDRDD+PDGGSGHFA+TV+AMK L P IMVECLTSDFRGDL AV +LV+SGLDVFAHNV
Sbjct: 203  SVDRDDIPDGGSGHFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNV 262

Query: 749  ETVKRLQRIVRDPRAGYEQSLSVLKHAKLCKEGMITKTSIMLGLGESDEEVKEAMADLRA 570
            ETVKRLQRIVRDPRAGY+QSL+VLKHAK  KEGMITK+SIMLGLGESD+E+KEA+ADLRA
Sbjct: 263  ETVKRLQRIVRDPRAGYDQSLAVLKHAKHSKEGMITKSSIMLGLGESDDELKEALADLRA 322

Query: 569  IDVDILTLGQYLQPTPLHLTVKEYVTPEKFTFWKDYGESIGFRYVASGPLVRSSYRAGEL 390
            IDVDILTLGQYLQPTPLHLTVKEYVTPEKF FWK+YGESIGFRYVASGPLVRSSYRAGEL
Sbjct: 323  IDVDILTLGQYLQPTPLHLTVKEYVTPEKFAFWKEYGESIGFRYVASGPLVRSSYRAGEL 382

Query: 389  FVKTMVREKNISNT 348
            FV+TMVRE+  S+T
Sbjct: 383  FVQTMVRERVKSST 396


>ref|NP_568196.1| lipoyl synthase [Arabidopsis thaliana]
            gi|308191548|sp|Q8LEE8.2|LISC_ARATH RecName: Full=Lipoyl
            synthase, chloroplastic; AltName: Full=Lipoate synthase;
            Short=LS; Short=Lip-syn; AltName: Full=Lipoate synthase,
            plastidial; Short=LIP1p; AltName: Full=Lipoic acid
            synthase; Flags: Precursor gi|20373023|dbj|BAB91180.1|
            lipoic acid synthase [Arabidopsis thaliana]
            gi|98960967|gb|ABF58967.1| At5g08415 [Arabidopsis
            thaliana] gi|332003915|gb|AED91298.1| lipoyl synthase
            [Arabidopsis thaliana]
          Length = 394

 Score =  563 bits (1450), Expect = e-158
 Identities = 274/310 (88%), Positives = 291/310 (93%), Gaps = 2/310 (0%)
 Frame = -1

Query: 1289 YPGG--GMGVHTGRDPNVKKPAWLRQKALQGERFLEVKDSLSKLKLNTVCEEAQCPNIGE 1116
            YPGG   MG  TGRDPNVKKPAWLRQKA QGERF EVK+SLS+L LNTVCEEAQCPNIGE
Sbjct: 78   YPGGMPKMGPFTGRDPNVKKPAWLRQKAPQGERFQEVKESLSRLNLNTVCEEAQCPNIGE 137

Query: 1115 CWNGGGDGIATATIMLLGDTCTRGCRFCAVKTSRNPSPPDPMEPENTAKAIASWGVDYIV 936
            CWNGGGDG+ATATIM+LGDTCTRGCRFCAVKTSRNP PPDPMEPENTAKAIASWGVDYIV
Sbjct: 138  CWNGGGDGVATATIMVLGDTCTRGCRFCAVKTSRNPPPPDPMEPENTAKAIASWGVDYIV 197

Query: 935  LTSVDRDDLPDGGSGHFARTVEAMKSLSPHIMVECLTSDFRGDLNAVTSLVYSGLDVFAH 756
            +TSVDRDD+PDGGSGHFA+TV+AMK   P IM+ECLTSDFRGDL AV +LV+SGLDVFAH
Sbjct: 198  ITSVDRDDIPDGGSGHFAQTVKAMKRHKPDIMIECLTSDFRGDLEAVDTLVHSGLDVFAH 257

Query: 755  NVETVKRLQRIVRDPRAGYEQSLSVLKHAKLCKEGMITKTSIMLGLGESDEEVKEAMADL 576
            NVETVKRLQR+VRDPRAGYEQS+SVLKHAK+ K GMITKTSIMLGLGE+DEE+KEAMADL
Sbjct: 258  NVETVKRLQRLVRDPRAGYEQSMSVLKHAKISKPGMITKTSIMLGLGETDEELKEAMADL 317

Query: 575  RAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFTFWKDYGESIGFRYVASGPLVRSSYRAG 396
            RAIDVDILTLGQYLQPTPLHLTVKEYVTPEKF FWK YGESIGFRYVASGPLVRSSYRAG
Sbjct: 318  RAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFDFWKTYGESIGFRYVASGPLVRSSYRAG 377

Query: 395  ELFVKTMVRE 366
            ELFVKTMV+E
Sbjct: 378  ELFVKTMVKE 387