BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018174
         (513 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523402.1| PREDICTED: putative transcription elongation...   189   3e-46
ref|XP_003526672.1| PREDICTED: putative transcription elongation...   188   3e-46
ref|XP_002265283.2| PREDICTED: putative transcription elongation...   188   4e-46
ref|XP_004162900.1| PREDICTED: putative transcription elongation...   181   5e-44
ref|XP_002526173.1| suppressor of ty, putative [Ricinus communis...   179   2e-43

>ref|XP_003523402.1| PREDICTED: putative transcription elongation factor SPT5 homolog
            1-like [Glycine max]
          Length = 1050

 Score =  189 bits (479), Expect = 3e-46
 Identities = 100/175 (57%), Positives = 120/175 (68%), Gaps = 5/175 (2%)
 Frame = +2

Query: 2    VERIHGGVLFIKDRHHLEHAGYICAKAQSCTVIGGTHANGGRHGDSYP----LRAVPKIL 169
            VE I+ G+LFI DRHHLEHAG+ICAKAQSC V+GG+ ++G R+GD+Y     LR+  +I 
Sbjct: 633  VEHIYRGILFIFDRHHLEHAGFICAKAQSCVVVGGSRSSGDRNGDAYSRFASLRSPSRIP 692

Query: 170  QNCIXXXXXXXXXXXXXXXXXXXHDSLAGKTITIRSGQYKSYRGRVVECKGQSVRVELES 349
             +                     HDSLAG T+ +R G YK YRGRV++ KG +VRVELES
Sbjct: 693  PSPRRFSRGGPMDSGGRHRGGRGHDSLAGTTVKVRQGPYKGYRGRVIDVKGTTVRVELES 752

Query: 350  QMKVVIVSRTQIYDHVAVSTPYWETPHSGLGSETPM-PPRTPLHPYMTPMRDPGA 511
            QMKVV V R  I D+VAV TPY +T   G+GSETPM P RTPLHPYMTPMRDPGA
Sbjct: 753  QMKVVTVDRNHISDNVAV-TPYRDTSRYGMGSETPMHPSRTPLHPYMTPMRDPGA 806


>ref|XP_003526672.1| PREDICTED: putative transcription elongation factor SPT5 homolog
            1-like [Glycine max]
          Length = 1039

 Score =  188 bits (478), Expect = 3e-46
 Identities = 100/175 (57%), Positives = 120/175 (68%), Gaps = 5/175 (2%)
 Frame = +2

Query: 2    VERIHGGVLFIKDRHHLEHAGYICAKAQSCTVIGGTHANGGRHGDSYP----LRAVPKIL 169
            VE I+ G+LFI DRHHLEHAG+ICAKAQSC V+GG+ ++G R+GD+Y     LR+  +I 
Sbjct: 622  VEHIYRGILFIFDRHHLEHAGFICAKAQSCVVVGGSRSSGERNGDAYSRFASLRSPSRIP 681

Query: 170  QNCIXXXXXXXXXXXXXXXXXXXHDSLAGKTITIRSGQYKSYRGRVVECKGQSVRVELES 349
             +                     HDSLAG T+ +R G YK YRGRV++ KG +VRVELES
Sbjct: 682  PSPRRFSRGGPMDSGGRHRGGRGHDSLAGTTVKVRQGPYKGYRGRVIDVKGTTVRVELES 741

Query: 350  QMKVVIVSRTQIYDHVAVSTPYWETPHSGLGSETPM-PPRTPLHPYMTPMRDPGA 511
            QMKVV V R  I D+VAV TPY +T   G+GSETPM P RTPLHPYMTPMRDPGA
Sbjct: 742  QMKVVTVDRNHISDNVAV-TPYRDTSRYGMGSETPMHPSRTPLHPYMTPMRDPGA 795


>ref|XP_002265283.2| PREDICTED: putative transcription elongation factor SPT5 homolog
            1-like isoform 1 [Vitis vinifera]
            gi|302142757|emb|CBI19960.3| unnamed protein product
            [Vitis vinifera]
          Length = 1034

 Score =  188 bits (477), Expect = 4e-46
 Identities = 101/176 (57%), Positives = 118/176 (67%), Gaps = 6/176 (3%)
 Frame = +2

Query: 2    VERIHGGVLFIKDRHHLEHAGYICAKAQSCTVIGGTHANGGRHGDSYP----LRAVPKIL 169
            VE I+ GVLFI DRHHLEHAG+ICAK+ SC V+GG+ +N  R GDS+     LR  P++ 
Sbjct: 614  VEHIYKGVLFIYDRHHLEHAGFICAKSHSCVVVGGSRSNADRSGDSFSRFANLRTPPRVP 673

Query: 170  QNCIXXXXXXXXXXXXXXXXXXX-HDSLAGKTITIRSGQYKSYRGRVVECKGQSVRVELE 346
            ++                      HDSL G TI IR G +K YRGRVV+  GQSVRVELE
Sbjct: 674  ESPRRFPRGGRPMDSGGRHRGGRGHDSLIGSTIKIRQGPFKGYRGRVVDVNGQSVRVELE 733

Query: 347  SQMKVVIVSRTQIYDHVAVSTPYWETPHSGLGSETPM-PPRTPLHPYMTPMRDPGA 511
            SQMKVV V R QI D+VAV+TPY + P  G+GSETPM P RTPLHPYMTPMRD GA
Sbjct: 734  SQMKVVTVDRNQISDNVAVATPYRDAPRYGMGSETPMHPSRTPLHPYMTPMRDVGA 789


>ref|XP_004162900.1| PREDICTED: putative transcription elongation factor SPT5 homolog
           1-like, partial [Cucumis sativus]
          Length = 849

 Score =  181 bits (459), Expect = 5e-44
 Identities = 96/176 (54%), Positives = 114/176 (64%), Gaps = 7/176 (3%)
 Frame = +2

Query: 2   VERIHGGVLFIKDRHHLEHAGYICAKAQSCTVIGGTHANGGRHGDSYP----LRAVPKIL 169
           VE I+ G+LFI DRHHLEHAG+ICAK+QSC V+GG+  NG R+G+SY     +   P+  
Sbjct: 427 VEHIYRGILFIYDRHHLEHAGFICAKSQSCVVVGGSRTNGNRNGNSYSRFAGIATPPRFP 486

Query: 170 QNC--IXXXXXXXXXXXXXXXXXXXHDSLAGKTITIRSGQYKSYRGRVVECKGQSVRVEL 343
           Q+                       HD L G T+ +R G YK YRGRVVE KGQ VRVEL
Sbjct: 487 QSPKRFSRGGPPNDSGGRHRGGRGHHDGLVGSTVKVRQGPYKGYRGRVVEIKGQLVRVEL 546

Query: 344 ESQMKVVIVSRTQIYDHVAVSTPYWETPHSGLGSETPM-PPRTPLHPYMTPMRDPG 508
           ESQMKVV V R  I D+VA+STP+ +    G+GSETPM P RTPLHPYMTPMRD G
Sbjct: 547 ESQMKVVTVDRNFISDNVAISTPHRDASRYGMGSETPMHPSRTPLHPYMTPMRDIG 602


>ref|XP_002526173.1| suppressor of ty, putative [Ricinus communis]
            gi|223534550|gb|EEF36249.1| suppressor of ty, putative
            [Ricinus communis]
          Length = 1045

 Score =  179 bits (455), Expect = 2e-43
 Identities = 97/179 (54%), Positives = 117/179 (65%), Gaps = 9/179 (5%)
 Frame = +2

Query: 2    VERIHGGVLFIKDRHHLEHAGYICAKAQSCTVIGGTHANGGRHGDSY----PLRAVPKIL 169
            VE I+ GVLFI DRHHLEHAG+ICAK+ SC V+GGT ANG R+GDSY      +  P++ 
Sbjct: 621  VEHIYKGVLFIYDRHHLEHAGFICAKSHSCIVVGGTRANGDRNGDSYSRFSSFKTPPRVP 680

Query: 170  QN--CIXXXXXXXXXXXXXXXXXXXHDSLAGKTITIRSGQYKSYRGRVVECKGQSVRVEL 343
            Q+                       HD+L G T+ IR G +K YRGRVVE KG SVRVEL
Sbjct: 681  QSPRRFPRGGPPFESGGRNRGGRGGHDALVGTTVKIRLGPFKGYRGRVVEIKGPSVRVEL 740

Query: 344  ESQMKVVI--VSRTQIYDHVAVSTPYWETPHSGLGSETPM-PPRTPLHPYMTPMRDPGA 511
            ESQMKV++    R  I D+V +STP+ ++   G+GSETPM P RTPLHPYMTPMRD GA
Sbjct: 741  ESQMKVILGKFDRNNISDNVVISTPHRDSSRYGMGSETPMHPSRTPLHPYMTPMRDAGA 799