BLASTX nr result

ID: Coptis21_contig00018169 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018169
         (1384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265275.1| PREDICTED: indole-3-glycerol phosphate synth...   496   e-138
ref|XP_004164055.1| PREDICTED: indole-3-glycerol phosphate synth...   488   e-135
ref|XP_004144552.1| PREDICTED: indole-3-glycerol phosphate synth...   488   e-135
emb|CBI28465.3| unnamed protein product [Vitis vinifera]              486   e-135
ref|XP_002532209.1| tryptophan biosynthesis protein, trpc, putat...   484   e-134

>ref|XP_002265275.1| PREDICTED: indole-3-glycerol phosphate synthase, chloroplastic [Vitis
            vinifera]
          Length = 396

 Score =  496 bits (1276), Expect = e-138
 Identities = 259/390 (66%), Positives = 297/390 (76%), Gaps = 10/390 (2%)
 Frame = +2

Query: 71   SIRTPPKIAFLSTSRQNLKTSFPIS----QIVGTSKPRTLSLRAQQLEASNEEPLSNP-- 232
            S+R  P++   + S  N K  F IS    ++  + K     +RAQQ E+ +     +P  
Sbjct: 6    SLRATPRVLVPTVSAPNHKPKFSISGTRMEVQKSKKLSVACVRAQQSESKDGSATVSPLS 65

Query: 233  ---EIVLKVKEWEVGKFQEEIAARDXXXXXXXXXXXXXQHYVGPFEFRLQNEGNTPRNIL 403
               E  LK+KEWEVG+FQ+EIAA                HYVGPFEFRLQNEGNTPRNIL
Sbjct: 66   DSQENALKIKEWEVGRFQDEIAATQGIRIRRRPPTGPPLHYVGPFEFRLQNEGNTPRNIL 125

Query: 404  EEIIWYKHTEVAKLKEKRPLHTLKKDIENSPV-RDFVGALKGSYLRTGVPALIAEVKKAS 580
            EEI+W K  EV++LKE++PL  LKK +EN+P  RDF+ AL+ S LRTG P LIAEVKKAS
Sbjct: 126  EEIVWNKDKEVSQLKERKPLGMLKKALENAPPNRDFIAALRASNLRTGFPGLIAEVKKAS 185

Query: 581  PSRGVLREDFDPVKIAQAYEDAGAACLSVLTDKKYFQGGFENLEAIRNAGIKCPLLCKEF 760
            PSRG+LREDFDPV+IA+AYE  GAACLSVLTD+KYF+G FENLE IRNAG+KCPLLCKEF
Sbjct: 186  PSRGILREDFDPVEIARAYEKGGAACLSVLTDEKYFKGSFENLELIRNAGVKCPLLCKEF 245

Query: 761  IIDAWQIYYARTKGADAVLLIAAVLPDLDIKYMTKICKMLGLAALVEVHDEREMDRVXXX 940
            ++DAWQIYYARTKGADA+LLIAAVLPDLDI+YMTKICKMLGLAALVEVHDEREMDRV   
Sbjct: 246  VVDAWQIYYARTKGADAILLIAAVLPDLDIRYMTKICKMLGLAALVEVHDEREMDRVLGI 305

Query: 941  XXXXXXXXXXXXXXTFELDISNTKKLLEGERGQIIRQKDIIVVGESGLFTPADIAYVQAA 1120
                          TFE+DISNTKKLLEGERG+IIRQKDIIVVGESGLFTPAD+AYVQ A
Sbjct: 306  EGIELIGINNRNLATFEVDISNTKKLLEGERGEIIRQKDIIVVGESGLFTPADVAYVQEA 365

Query: 1121 GVKAVLVGESIVKQDDPGKGITGLFGRSIS 1210
            GVKA+LVGESIVKQ DP  GITGLFG+ IS
Sbjct: 366  GVKAILVGESIVKQKDPRSGITGLFGKDIS 395


>ref|XP_004164055.1| PREDICTED: indole-3-glycerol phosphate synthase, chloroplastic-like
            [Cucumis sativus]
          Length = 411

 Score =  488 bits (1257), Expect = e-135
 Identities = 247/370 (66%), Positives = 289/370 (78%), Gaps = 6/370 (1%)
 Frame = +2

Query: 119  NLKTSFPISQIVGTSKPRTLSLRAQQLEASNEEPLSNP-----EIVLKVKEWEVGKFQEE 283
            +L+ S  ++    +S P   ++RAQQ+E+      ++P     E  LKVKEWEVG FQ+E
Sbjct: 41   SLRNSITLTSSSSSSSPMFTAIRAQQIESEAGSAAASPGTESEENALKVKEWEVGMFQDE 100

Query: 284  IAARDXXXXXXXXXXXXXQHYVGPFEFRLQNEGNTPRNILEEIIWYKHTEVAKLKEKRPL 463
            + A                HYVGPF+FRLQNEGNTPRNILEEI+WYK  EV+++KE+RPL
Sbjct: 101  VEATQGIRIRRRPPTGPPLHYVGPFQFRLQNEGNTPRNILEEIVWYKDKEVSQMKERRPL 160

Query: 464  HTLKKDIENSP-VRDFVGALKGSYLRTGVPALIAEVKKASPSRGVLREDFDPVKIAQAYE 640
             +LKKD+E +P  RDF+GALK +YLRT +P LIAEVKKASPSRGVLREDFDPV+IAQAYE
Sbjct: 161  FSLKKDLERAPPARDFLGALKAAYLRTNLPGLIAEVKKASPSRGVLREDFDPVEIAQAYE 220

Query: 641  DAGAACLSVLTDKKYFQGGFENLEAIRNAGIKCPLLCKEFIIDAWQIYYARTKGADAVLL 820
              GAACLSVLTD+K+FQG FENLE IRNAG+KCPLLCKEF++DAWQIYYAR+KGADA+LL
Sbjct: 221  KGGAACLSVLTDEKFFQGSFENLEKIRNAGVKCPLLCKEFVVDAWQIYYARSKGADAILL 280

Query: 821  IAAVLPDLDIKYMTKICKMLGLAALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFELDI 1000
            IAAVLPDLDIKYM KICKM+GL  LVEVHDE+EMDR+                 TFE+DI
Sbjct: 281  IAAVLPDLDIKYMVKICKMVGLTPLVEVHDEKEMDRMLAIEGIELIGINNRNLETFEVDI 340

Query: 1001 SNTKKLLEGERGQIIRQKDIIVVGESGLFTPADIAYVQAAGVKAVLVGESIVKQDDPGKG 1180
            SNTKKLLEGERGQ IR+K++I+VGESGLFTP DIAYVQ AGVKAVLVGESIVKQ DP KG
Sbjct: 341  SNTKKLLEGERGQKIREKNVIIVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQSDPTKG 400

Query: 1181 ITGLFGRSIS 1210
            ITGLFG+ IS
Sbjct: 401  ITGLFGKDIS 410


>ref|XP_004144552.1| PREDICTED: indole-3-glycerol phosphate synthase, chloroplastic-like
            [Cucumis sativus]
          Length = 411

 Score =  488 bits (1257), Expect = e-135
 Identities = 248/370 (67%), Positives = 289/370 (78%), Gaps = 6/370 (1%)
 Frame = +2

Query: 119  NLKTSFPISQIVGTSKPRTLSLRAQQLEASNEEPLSNP-----EIVLKVKEWEVGKFQEE 283
            +L+ S   +    +S P   ++RAQQ+E+      ++P     E  LKVKEWEVG FQ+E
Sbjct: 41   SLRNSITPTSSSSSSSPMFTAIRAQQIESEAGSAAASPGTESEENALKVKEWEVGMFQDE 100

Query: 284  IAARDXXXXXXXXXXXXXQHYVGPFEFRLQNEGNTPRNILEEIIWYKHTEVAKLKEKRPL 463
            +AA                HYVGPF+FRLQNEGNTPRNILEEI+WYK  EV+++KE+RPL
Sbjct: 101  VAATQGIRIRRRPPTGPPLHYVGPFQFRLQNEGNTPRNILEEIVWYKDKEVSQMKERRPL 160

Query: 464  HTLKKDIENSP-VRDFVGALKGSYLRTGVPALIAEVKKASPSRGVLREDFDPVKIAQAYE 640
             +LKKD+E +P  RDF+GALK +YLRT +P LIAEVKKASPSRGVLREDFDPV+IAQAYE
Sbjct: 161  FSLKKDLERAPPARDFLGALKAAYLRTNLPGLIAEVKKASPSRGVLREDFDPVEIAQAYE 220

Query: 641  DAGAACLSVLTDKKYFQGGFENLEAIRNAGIKCPLLCKEFIIDAWQIYYARTKGADAVLL 820
              GAACLSVLTD+K+FQG FENLE IRNAG+KCPLLCKEF++DAWQIYYAR+KGADA+LL
Sbjct: 221  KGGAACLSVLTDEKFFQGSFENLEKIRNAGVKCPLLCKEFVVDAWQIYYARSKGADAILL 280

Query: 821  IAAVLPDLDIKYMTKICKMLGLAALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFELDI 1000
            IAAVLPDLDIKYM KICKM+GL  LVEVHDE+EMDR+                 TFE+DI
Sbjct: 281  IAAVLPDLDIKYMVKICKMVGLTPLVEVHDEKEMDRMLAIEGIELIGINNRNLETFEVDI 340

Query: 1001 SNTKKLLEGERGQIIRQKDIIVVGESGLFTPADIAYVQAAGVKAVLVGESIVKQDDPGKG 1180
            SNTKKLLEGERGQ IR+K++I+VGESGLFTP DIAYVQ AGVKAVLVGESIVKQ DP KG
Sbjct: 341  SNTKKLLEGERGQKIREKNVIIVGESGLFTPDDIAYVQEAGVKAVLVGESIVKQSDPTKG 400

Query: 1181 ITGLFGRSIS 1210
            ITGLFG+ IS
Sbjct: 401  ITGLFGKDIS 410


>emb|CBI28465.3| unnamed protein product [Vitis vinifera]
          Length = 363

 Score =  486 bits (1251), Expect = e-135
 Identities = 250/361 (69%), Positives = 284/361 (78%), Gaps = 6/361 (1%)
 Frame = +2

Query: 146  QIVGTSKPRTLSLRAQQLEASNEEPLSNP-----EIVLKVKEWEVGKFQEEIAARDXXXX 310
            ++  + K     +RAQQ E+ +     +P     E  LK+KEWEVG+FQ+EIAA      
Sbjct: 2    EVQKSKKLSVACVRAQQSESKDGSATVSPLSDSQENALKIKEWEVGRFQDEIAATQGIRI 61

Query: 311  XXXXXXXXXQHYVGPFEFRLQNEGNTPRNILEEIIWYKHTEVAKLKEKRPLHTLKKDIEN 490
                      HYVGPFEFRLQNEGNTPRNILEEI+W K  EV++LKE++PL  LKK +EN
Sbjct: 62   RRRPPTGPPLHYVGPFEFRLQNEGNTPRNILEEIVWNKDKEVSQLKERKPLGMLKKALEN 121

Query: 491  SPV-RDFVGALKGSYLRTGVPALIAEVKKASPSRGVLREDFDPVKIAQAYEDAGAACLSV 667
            +P  RDF+ AL+ S LRTG P LIAEVKKASPSRG+LREDFDPV+IA+AYE  GAACLSV
Sbjct: 122  APPNRDFIAALRASNLRTGFPGLIAEVKKASPSRGILREDFDPVEIARAYEKGGAACLSV 181

Query: 668  LTDKKYFQGGFENLEAIRNAGIKCPLLCKEFIIDAWQIYYARTKGADAVLLIAAVLPDLD 847
            LTD+KYF+G FENLE IRNAG+KCPLLCKEF++DAWQIYYARTKGADA+LLIAAVLPDLD
Sbjct: 182  LTDEKYFKGSFENLELIRNAGVKCPLLCKEFVVDAWQIYYARTKGADAILLIAAVLPDLD 241

Query: 848  IKYMTKICKMLGLAALVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFELDISNTKKLLEG 1027
            I+YMTKICKMLGLAALVEVHDEREMDRV                 TFE+DISNTKKLLEG
Sbjct: 242  IRYMTKICKMLGLAALVEVHDEREMDRVLGIEGIELIGINNRNLATFEVDISNTKKLLEG 301

Query: 1028 ERGQIIRQKDIIVVGESGLFTPADIAYVQAAGVKAVLVGESIVKQDDPGKGITGLFGRSI 1207
            ERG+IIRQKDIIVVGESGLFTPAD+AYVQ AGVKA+LVGESIVKQ DP  GITGLFG+ I
Sbjct: 302  ERGEIIRQKDIIVVGESGLFTPADVAYVQEAGVKAILVGESIVKQKDPRSGITGLFGKDI 361

Query: 1208 S 1210
            S
Sbjct: 362  S 362


>ref|XP_002532209.1| tryptophan biosynthesis protein, trpc, putative [Ricinus communis]
            gi|223528105|gb|EEF30178.1| tryptophan biosynthesis
            protein, trpc, putative [Ricinus communis]
          Length = 389

 Score =  484 bits (1247), Expect = e-134
 Identities = 247/346 (71%), Positives = 277/346 (80%), Gaps = 2/346 (0%)
 Frame = +2

Query: 179  SLRAQQLEASNEEPLSNPEI-VLKVKEWEVGKFQEEIAARDXXXXXXXXXXXXXQHYVGP 355
            S+RAQQ +      +   E  VLKVKEWEVG  Q E+AA                HYVGP
Sbjct: 42   SIRAQQPDTKEGLAMVEEESNVLKVKEWEVGMLQNEVAASQGIRIRRRPPTGPPLHYVGP 101

Query: 356  FEFRLQNEGNTPRNILEEIIWYKHTEVAKLKEKRPLHTLKKDIENSP-VRDFVGALKGSY 532
            FEFR+QNEGNTPRNILEEIIW+KHTEV++LKE+RPL  LK  ++N+P  RDF+GALK + 
Sbjct: 102  FEFRIQNEGNTPRNILEEIIWHKHTEVSQLKERRPLSVLKNSLDNAPPTRDFIGALKAAN 161

Query: 533  LRTGVPALIAEVKKASPSRGVLREDFDPVKIAQAYEDAGAACLSVLTDKKYFQGGFENLE 712
            LR G P LIAEVKKASPSRG+LREDFDPV+IAQAYE  GAACLSVLTD+K+F+G FENLE
Sbjct: 162  LRIGFPGLIAEVKKASPSRGILREDFDPVEIAQAYEKGGAACLSVLTDEKFFKGSFENLE 221

Query: 713  AIRNAGIKCPLLCKEFIIDAWQIYYARTKGADAVLLIAAVLPDLDIKYMTKICKMLGLAA 892
            AIRN+G+KCPLLCKEF+IDAWQIYYARTKGADA+LLIAAVLPDLDIKYMTKICK+LGL A
Sbjct: 222  AIRNSGVKCPLLCKEFVIDAWQIYYARTKGADAILLIAAVLPDLDIKYMTKICKVLGLTA 281

Query: 893  LVEVHDEREMDRVXXXXXXXXXXXXXXXXXTFELDISNTKKLLEGERGQIIRQKDIIVVG 1072
            L+EVHDEREMDRV                 TFE+DISNT+KLLEGERGQ+I+QK IIVVG
Sbjct: 282  LIEVHDEREMDRVLAIEGVELIGINNRNLETFEVDISNTRKLLEGERGQLIQQKGIIVVG 341

Query: 1073 ESGLFTPADIAYVQAAGVKAVLVGESIVKQDDPGKGITGLFGRSIS 1210
            ESGLFTP DIAYV  AGVKAVLVGESIVKQ DPGKGITGLFG+ IS
Sbjct: 342  ESGLFTPEDIAYVHEAGVKAVLVGESIVKQSDPGKGITGLFGKDIS 387


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