BLASTX nr result

ID: Coptis21_contig00018168 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018168
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303489.1| predicted protein [Populus trichocarpa] gi|2...    87   2e-15
ref|XP_002886939.1| hypothetical protein ARALYDRAFT_475645 [Arab...    86   4e-15
ref|XP_002283115.1| PREDICTED: uncharacterized protein LOC100267...    86   4e-15
ref|XP_002326610.1| predicted protein [Populus trichocarpa] gi|2...    85   5e-15
gb|AFJ66205.1| hypothetical protein 34G24.3 [Capsella rubella]         83   2e-14

>ref|XP_002303489.1| predicted protein [Populus trichocarpa] gi|222840921|gb|EEE78468.1|
           predicted protein [Populus trichocarpa]
          Length = 794

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 47/93 (50%), Positives = 54/93 (58%), Gaps = 9/93 (9%)
 Frame = +1

Query: 10  SGGXXXXXXXXXXXXXWDPP-------TTEDXXXXXXXXXXXXWADDEPKPIIQLPDFMK 168
           SGG             WDPP       +  +            WADDEPKP+IQLPDFMK
Sbjct: 110 SGGEEETTSRRRRRSRWDPPADAGADGSNNNDSGSGTRKRKSRWADDEPKPVIQLPDFMK 169

Query: 169 EFTGAL--DPEVQALNARLLEISRLLASGLTLD 261
           +FTG +  DPE+QALNARLLEISR+L SGL LD
Sbjct: 170 DFTGGIEFDPEIQALNARLLEISRMLQSGLPLD 202


>ref|XP_002886939.1| hypothetical protein ARALYDRAFT_475645 [Arabidopsis lyrata subsp.
           lyrata] gi|297332780|gb|EFH63198.1| hypothetical protein
           ARALYDRAFT_475645 [Arabidopsis lyrata subsp. lyrata]
          Length = 782

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 46/90 (51%), Positives = 54/90 (60%), Gaps = 4/90 (4%)
 Frame = +1

Query: 4   NNSGGXXXXXXXXXXXXXWDPPTTEDXXXXXXXXXXXX--WADDEPKPIIQLPDFMKEFT 177
           + SGG             WDPP +E               WADDEPKP IQLPDFMK+FT
Sbjct: 75  DQSGGEEETTSRRKRRSRWDPPPSEGGTDSEPGIRKRKSRWADDEPKPQIQLPDFMKDFT 134

Query: 178 GAL--DPEVQALNARLLEISRLLASGLTLD 261
           G +  DPE+QALN+RLLEISR+L SG+ LD
Sbjct: 135 GGIEFDPEIQALNSRLLEISRMLQSGMPLD 164


>ref|XP_002283115.1| PREDICTED: uncharacterized protein LOC100267539 [Vitis vinifera]
          Length = 794

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 47/93 (50%), Positives = 54/93 (58%), Gaps = 9/93 (9%)
 Frame = +1

Query: 10  SGGXXXXXXXXXXXXXWDPPTT-------EDXXXXXXXXXXXXWADDEPKPIIQLPDFMK 168
           SGG             WDPP+        E             WADDEPKP+IQLPDFMK
Sbjct: 104 SGGEEETTSRRRRRSRWDPPSDSGNQTAGEAAEGTGARKRKSRWADDEPKPLIQLPDFMK 163

Query: 169 EFTGAL--DPEVQALNARLLEISRLLASGLTLD 261
           +FTG +  DPE+QALN+RLLEISR+L SGL LD
Sbjct: 164 DFTGGIEFDPEIQALNSRLLEISRMLQSGLPLD 196


>ref|XP_002326610.1| predicted protein [Populus trichocarpa] gi|222833932|gb|EEE72409.1|
           predicted protein [Populus trichocarpa]
          Length = 704

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 48/101 (47%), Positives = 54/101 (53%), Gaps = 17/101 (16%)
 Frame = +1

Query: 10  SGGXXXXXXXXXXXXXWDPP---------------TTEDXXXXXXXXXXXXWADDEPKPI 144
           SGG             WDPP               T  +            WADDEPKP+
Sbjct: 25  SGGEEETTSRRRRRSRWDPPADSGTDGGGGGSSSNTNNNDSGSGTRKRKSRWADDEPKPV 84

Query: 145 IQLPDFMKEFTGAL--DPEVQALNARLLEISRLLASGLTLD 261
           IQLPDFMK+FTG +  DPE+QALNARLLEISR+L SGL LD
Sbjct: 85  IQLPDFMKDFTGGIEFDPEIQALNARLLEISRMLQSGLPLD 125


>gb|AFJ66205.1| hypothetical protein 34G24.3 [Capsella rubella]
          Length = 806

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 46/98 (46%), Positives = 55/98 (56%), Gaps = 12/98 (12%)
 Frame = +1

Query: 4   NNSGGXXXXXXXXXXXXXWDPPTTE----------DXXXXXXXXXXXXWADDEPKPIIQL 153
           + SGG             WDPP +E          +            WADDEPKP IQL
Sbjct: 81  DQSGGEEETTSRRKRRSRWDPPPSESINNPSAEGGNDSGTGTRKRKSRWADDEPKPQIQL 140

Query: 154 PDFMKEFTGAL--DPEVQALNARLLEISRLLASGLTLD 261
           PDFMK+FTG +  DPE+QALN+RLLEISR+L SG+ LD
Sbjct: 141 PDFMKDFTGGIEFDPEIQALNSRLLEISRMLQSGMPLD 178


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