BLASTX nr result

ID: Coptis21_contig00018160 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018160
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284591.1| PREDICTED: uncharacterized protein At1g47420...   138   4e-31
ref|XP_004152731.1| PREDICTED: uncharacterized protein At1g47420...   137   9e-31
ref|XP_002510249.1| conserved hypothetical protein [Ricinus comm...   135   4e-30
gb|AFK39493.1| unknown [Medicago truncatula]                          134   1e-29
ref|NP_564506.1| succinate dehydrogenase 5 [Arabidopsis thaliana...   133   1e-29

>ref|XP_002284591.1| PREDICTED: uncharacterized protein At1g47420, mitochondrial [Vitis
           vinifera] gi|147811478|emb|CAN63226.1| hypothetical
           protein VITISV_002665 [Vitis vinifera]
           gi|302142337|emb|CBI19540.3| unnamed protein product
           [Vitis vinifera]
          Length = 242

 Score =  138 bits (348), Expect = 4e-31
 Identities = 68/103 (66%), Positives = 80/103 (77%)
 Frame = -1

Query: 309 DRTGREVLVDVFRAAEAVEEFGRILVTLRMEIDDFIGMSGEKIGPLPNEHEEALLEVHKR 130
           D+ G+E L +VFRAAEA  EFG ILVTLRMEIDD +G+SGE + PLP+E   AL+ V KR
Sbjct: 121 DKAGQEALANVFRAAEAAVEFGGILVTLRMEIDDLVGISGENVKPLPDEFVNALVTVFKR 180

Query: 129 YEAYLDAFGPDEIYLQKKVETELGAKMNLLKMRCSFLDAEWGK 1
           Y  YLD+FGPDE +L+KKVE ELG KM  LK+RCS L AEWGK
Sbjct: 181 YTTYLDSFGPDEAFLRKKVEMELGTKMIHLKLRCSDLGAEWGK 223


>ref|XP_004152731.1| PREDICTED: uncharacterized protein At1g47420, mitochondrial-like
           [Cucumis sativus] gi|449496011|ref|XP_004160011.1|
           PREDICTED: uncharacterized protein At1g47420,
           mitochondrial-like [Cucumis sativus]
          Length = 241

 Score =  137 bits (345), Expect = 9e-31
 Identities = 66/103 (64%), Positives = 84/103 (81%)
 Frame = -1

Query: 309 DRTGREVLVDVFRAAEAVEEFGRILVTLRMEIDDFIGMSGEKIGPLPNEHEEALLEVHKR 130
           D+ G+E++ +VFRAAEA EEFG +L+ L+MEIDD IG+SGE + PL +E ++AL  VH+R
Sbjct: 121 DKAGKEIVENVFRAAEAAEEFGDMLINLKMEIDDSIGLSGENVKPLSDELKKALHTVHER 180

Query: 129 YEAYLDAFGPDEIYLQKKVETELGAKMNLLKMRCSFLDAEWGK 1
           Y AYLD+FGP+E YL+KKVETELG KM  LKMRCS L +EWGK
Sbjct: 181 YIAYLDSFGPEENYLRKKVETELGTKMIYLKMRCSGLGSEWGK 223


>ref|XP_002510249.1| conserved hypothetical protein [Ricinus communis]
           gi|223550950|gb|EEF52436.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 238

 Score =  135 bits (339), Expect = 4e-30
 Identities = 65/103 (63%), Positives = 84/103 (81%)
 Frame = -1

Query: 309 DRTGREVLVDVFRAAEAVEEFGRILVTLRMEIDDFIGMSGEKIGPLPNEHEEALLEVHKR 130
           D++G+++L +VFRAAEAVEEFG IL++L+ME+DD IG+SGE + PL +E+  AL    +R
Sbjct: 118 DKSGQDILKNVFRAAEAVEEFGGILMSLKMELDDNIGLSGENVKPLSDEYANALRTAFQR 177

Query: 129 YEAYLDAFGPDEIYLQKKVETELGAKMNLLKMRCSFLDAEWGK 1
           Y AYLDAFGPDE +L+KKVE ELG+KM  LKMRCS LD+ WGK
Sbjct: 178 YSAYLDAFGPDEGFLRKKVEMELGSKMIYLKMRCSGLDSAWGK 220


>gb|AFK39493.1| unknown [Medicago truncatula]
          Length = 238

 Score =  134 bits (336), Expect = 1e-29
 Identities = 66/104 (63%), Positives = 80/104 (76%)
 Frame = -1

Query: 312 KDRTGREVLVDVFRAAEAVEEFGRILVTLRMEIDDFIGMSGEKIGPLPNEHEEALLEVHK 133
           +D  G+EV+ +VFRAA+AVEEFG IL TL+MEIDD IG+SGE + PLP+  + AL  +  
Sbjct: 117 EDEAGKEVVTNVFRAAQAVEEFGGILNTLKMEIDDSIGLSGEDVKPLPDHMQNALRTIFD 176

Query: 132 RYEAYLDAFGPDEIYLQKKVETELGAKMNLLKMRCSFLDAEWGK 1
           RY  YL+AFGPDE YL+KKVE ELG KM  LKMRCS L +EWGK
Sbjct: 177 RYTTYLNAFGPDENYLRKKVEQELGTKMIYLKMRCSGLGSEWGK 220


>ref|NP_564506.1| succinate dehydrogenase 5 [Arabidopsis thaliana]
           gi|25091506|sp|Q9SX77.1|UMP6_ARATH RecName:
           Full=Uncharacterized protein At1g47420, mitochondrial;
           Flags: Precursor gi|5668814|gb|AAD46040.1|AC007519_25
           ESTs gb|H36253 and gb|AA04251 come from this gene
           [Arabidopsis thaliana]
           gi|12744995|gb|AAK06877.1|AF344326_1 unknown protein
           [Arabidopsis thaliana] gi|14334512|gb|AAK59453.1|
           unknown protein [Arabidopsis thaliana]
           gi|15450966|gb|AAK96754.1| Unknown protein [Arabidopsis
           thaliana] gi|17104551|gb|AAL34164.1| unknown protein
           [Arabidopsis thaliana] gi|21536627|gb|AAM60959.1|
           unknown [Arabidopsis thaliana]
           gi|23198274|gb|AAN15664.1| Unknown protein [Arabidopsis
           thaliana] gi|332194047|gb|AEE32168.1| succinate
           dehydrogenase 5 [Arabidopsis thaliana]
          Length = 257

 Score =  133 bits (335), Expect = 1e-29
 Identities = 65/103 (63%), Positives = 81/103 (78%)
 Frame = -1

Query: 309 DRTGREVLVDVFRAAEAVEEFGRILVTLRMEIDDFIGMSGEKIGPLPNEHEEALLEVHKR 130
           D+ G+E L +VFRAAEAVEEFG IL +++MEIDD IGMSGE + PLPN+  +AL   ++R
Sbjct: 137 DKAGQEALKNVFRAAEAVEEFGGILTSIKMEIDDSIGMSGEGVKPLPNDITDALRTAYQR 196

Query: 129 YEAYLDAFGPDEIYLQKKVETELGAKMNLLKMRCSFLDAEWGK 1
           Y  YLD+F P+E+YL+KKVE ELG KM  LKMRCS L +EWGK
Sbjct: 197 YAEYLDSFEPEEVYLKKKVEMELGTKMIHLKMRCSGLGSEWGK 239


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