BLASTX nr result

ID: Coptis21_contig00018154 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018154
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517615.1| nucleic acid binding protein, putative [Rici...   170   1e-40
ref|XP_002328612.1| predicted protein [Populus trichocarpa] gi|2...   166   2e-39
ref|XP_002269416.1| PREDICTED: DCC family protein At1g52590, chl...   164   5e-39
dbj|BAJ53228.1| JHL06P13.8 [Jatropha curcas]                          164   9e-39
ref|XP_003597881.1| DCC family protein [Medicago truncatula] gi|...   151   6e-35

>ref|XP_002517615.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223543247|gb|EEF44779.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 180

 Score =  170 bits (430), Expect = 1e-40
 Identities = 83/115 (72%), Positives = 96/115 (83%)
 Frame = -2

Query: 347 MALLVPAQCVRLRVSRPAHTRRTISPFATLSPPQRSDAVDWVEATSSFFEQDSRPIMLFD 168
           MAL+ P+ CVRL     AH R  ++ FAT+SPP  S  V+WVEAT+ FFE+D+RPIMLFD
Sbjct: 1   MALVTPSSCVRLTAVPTAHVRHRMAVFATISPPS-SGTVNWVEATNGFFERDARPIMLFD 59

Query: 167 GVCNLCNGGVKFVRDNDQQRKIRFEALQSESGKNLLRRSGRTPDDISSVVLVEKD 3
           GVCNLCNGGV+FVRDND+ RKIR+EALQSE+GK LLRRSGR PDDISSVVLVEKD
Sbjct: 60  GVCNLCNGGVRFVRDNDRNRKIRYEALQSEAGKKLLRRSGRAPDDISSVVLVEKD 114


>ref|XP_002328612.1| predicted protein [Populus trichocarpa] gi|222838594|gb|EEE76959.1|
           predicted protein [Populus trichocarpa]
          Length = 176

 Score =  166 bits (420), Expect = 2e-39
 Identities = 79/115 (68%), Positives = 94/115 (81%)
 Frame = -2

Query: 347 MALLVPAQCVRLRVSRPAHTRRTISPFATLSPPQRSDAVDWVEATSSFFEQDSRPIMLFD 168
           MA+L    C  LR++   H +R I+ FAT SPP+   AV+WVEAT  FFE+DSRPIMLFD
Sbjct: 1   MAILGSGSCTLLRLTPSNHDKRRIATFATQSPPRNDSAVNWVEATGGFFEKDSRPIMLFD 60

Query: 167 GVCNLCNGGVKFVRDNDQQRKIRFEALQSESGKNLLRRSGRTPDDISSVVLVEKD 3
           GVCNLCNGGV+FVRDND+ R+IR+EALQSE+G+ LLRRSGR PDDISSVVLVE+D
Sbjct: 61  GVCNLCNGGVRFVRDNDRNRRIRYEALQSEAGRKLLRRSGRAPDDISSVVLVERD 115


>ref|XP_002269416.1| PREDICTED: DCC family protein At1g52590, chloroplastic [Vitis
           vinifera]
          Length = 176

 Score =  164 bits (416), Expect = 5e-39
 Identities = 84/115 (73%), Positives = 92/115 (80%)
 Frame = -2

Query: 347 MALLVPAQCVRLRVSRPAHTRRTISPFATLSPPQRSDAVDWVEATSSFFEQDSRPIMLFD 168
           +AL VP  C RLR S  A  R T+   A L+P  R DAVDWV  TSSFFEQDSRPIMLFD
Sbjct: 3   LALSVPVGCARLRASTAARVRPTVVVSANLAP-LRGDAVDWVAGTSSFFEQDSRPIMLFD 61

Query: 167 GVCNLCNGGVKFVRDNDQQRKIRFEALQSESGKNLLRRSGRTPDDISSVVLVEKD 3
           GVCNLCNGGV+FVR+ND+ R IRFEALQSE+GK LLRRSGR PDDISSVVLVEK+
Sbjct: 62  GVCNLCNGGVRFVRNNDRNRSIRFEALQSEAGKKLLRRSGRAPDDISSVVLVEKE 116


>dbj|BAJ53228.1| JHL06P13.8 [Jatropha curcas]
          Length = 178

 Score =  164 bits (414), Expect = 9e-39
 Identities = 80/117 (68%), Positives = 99/117 (84%), Gaps = 2/117 (1%)
 Frame = -2

Query: 347 MALLVPAQCVRLRVSRPAHTRRTISPFATLSPPQ-RSDA-VDWVEATSSFFEQDSRPIML 174
           MA++ P  C R+ ++  AH RR ++ FATL PP  RS+  VDWV+A++SFFE+DSRPIML
Sbjct: 1   MAVVTPGGCARISIAPTAHVRRKMAVFATLPPPPVRSETTVDWVKASNSFFERDSRPIML 60

Query: 173 FDGVCNLCNGGVKFVRDNDQQRKIRFEALQSESGKNLLRRSGRTPDDISSVVLVEKD 3
           FDGVCNLCNGGV+FVR+ND +R+IR+EALQSE+GK LLRRSGR PDDISSVVLVEK+
Sbjct: 61  FDGVCNLCNGGVRFVRENDSKRRIRYEALQSEAGKKLLRRSGRAPDDISSVVLVEKE 117


>ref|XP_003597881.1| DCC family protein [Medicago truncatula] gi|87162922|gb|ABD28717.1|
           Putative thiol-disulphide oxidoreductase DCC [Medicago
           truncatula] gi|355486929|gb|AES68132.1| DCC family
           protein [Medicago truncatula]
          Length = 178

 Score =  151 bits (381), Expect = 6e-35
 Identities = 78/115 (67%), Positives = 90/115 (78%)
 Frame = -2

Query: 347 MALLVPAQCVRLRVSRPAHTRRTISPFATLSPPQRSDAVDWVEATSSFFEQDSRPIMLFD 168
           + L +PA   R++        R  + FATLS P RSD V+WVEATSSFF+QD RPIMLFD
Sbjct: 7   LQLQLPASIGRVKSITCPPRARKATTFATLSQP-RSDTVNWVEATSSFFDQDKRPIMLFD 65

Query: 167 GVCNLCNGGVKFVRDNDQQRKIRFEALQSESGKNLLRRSGRTPDDISSVVLVEKD 3
           GVCNLCNGGVKFVRDND+ + IR+EALQSE+GK LLRRSGR PDDISSVVLVE +
Sbjct: 66  GVCNLCNGGVKFVRDNDRNKSIRYEALQSEAGKMLLRRSGRAPDDISSVVLVENN 120


Top