BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018136
         (926 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282354.1| PREDICTED: splicing factor 3B subunit 3-like...   317   e-103
emb|CAN64633.1| hypothetical protein VITISV_043788 [Vitis vinifera]   315   e-103
ref|XP_002312063.1| predicted protein [Populus trichocarpa] gi|2...   306   4e-99
ref|XP_002534515.1| spliceosomal protein sap, putative [Ricinus ...   302   2e-98
ref|XP_004147708.1| PREDICTED: splicing factor 3B subunit 3-like...   299   6e-98

>ref|XP_002282354.1| PREDICTED: splicing factor 3B subunit 3-like [Vitis vinifera]
          Length = 1214

 Score =  317 bits (811), Expect(2) = e-103
 Identities = 161/253 (63%), Positives = 189/253 (74%)
 Frame = -3

Query: 894  KRKASFLAVGSHDNTIRILSLDPDDCMKIXXXXXXXXXXXXXXXLDARASVGGEDGVYHP 715
            ++++ FLAVGS+DNTIRILSLDPDDCM+I               L+ +ASVGGEDG  HP
Sbjct: 596  RQRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHP 655

Query: 714  VGVFLNVGLQSCVLYRTVVDMVTGQLSDTHSRLLGLRAPKLFCALVRGRRALLCLSSKPW 535
              +FLN GLQ+ VL+RTVVDMVTGQLSD  SR LGLRAPKLF  +VRGRRA+LCLSS+PW
Sbjct: 656  ASLFLNAGLQNGVLFRTVVDMVTGQLSDARSRFLGLRAPKLFSVIVRGRRAMLCLSSRPW 715

Query: 534  LGYIHGGNFLLTPLXXXXXXXXXXXXXSQCAEGVVAVTGDALRIFTIEQVGETFNETMIP 355
            LGYIH G+FLLTPL              QCAEGVVAV GDALR+FTIE++GETFNET+IP
Sbjct: 716  LGYIHQGHFLLTPLSYETLEFAASFSSDQCAEGVVAVAGDALRVFTIERLGETFNETVIP 775

Query: 354  LRYTPRKLVHHPNGKHLIAIESEQGAFSAEERKAARKECLKAVGMEVNGNHNAQQVGNSN 175
            LRYTPRK V  P  K L+ IES+QGAF+AEER+AA+KEC +A GM  NGN N +Q+ N  
Sbjct: 776  LRYTPRKFVLQPKRKLLVVIESDQGAFAAEEREAAKKECFEAAGMGENGNGNVEQMENGG 835

Query: 174  DDEEICGSLSDEQ 136
            DDE+    LSDEQ
Sbjct: 836  DDEDKDDPLSDEQ 848



 Score = 85.5 bits (210), Expect(2) = e-103
 Identities = 36/46 (78%), Positives = 43/46 (93%)
 Frame = -2

Query: 139 AEAQKWVSCIRVIEPRTETTTCLLELQDNEAAFGVCTVNFNNKEYG 2
           AE+ KWVSCIR+++PRT TTTCLLELQDNEAAF +CTVNF++KEYG
Sbjct: 854 AESDKWVSCIRILDPRTATTTCLLELQDNEAAFSICTVNFHDKEYG 899


>emb|CAN64633.1| hypothetical protein VITISV_043788 [Vitis vinifera]
          Length = 1143

 Score =  315 bits (808), Expect(2) = e-103
 Identities = 161/251 (64%), Positives = 187/251 (74%)
 Frame = -3

Query: 888  KASFLAVGSHDNTIRILSLDPDDCMKIXXXXXXXXXXXXXXXLDARASVGGEDGVYHPVG 709
            ++ FLAVGS+DNTIRILSLDPDDCM+I               L+ +ASVGGEDG  HP  
Sbjct: 557  RSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPAS 616

Query: 708  VFLNVGLQSCVLYRTVVDMVTGQLSDTHSRLLGLRAPKLFCALVRGRRALLCLSSKPWLG 529
            +FLN GLQ+ VL+RTVVDMVTGQLSD  SR LGLRAPKLF  +VRGRRA+LCLSS+PWLG
Sbjct: 617  LFLNAGLQNGVLFRTVVDMVTGQLSDARSRFLGLRAPKLFSVIVRGRRAMLCLSSRPWLG 676

Query: 528  YIHGGNFLLTPLXXXXXXXXXXXXXSQCAEGVVAVTGDALRIFTIEQVGETFNETMIPLR 349
            YIH G+FLLTPL              QCAEGVVAV GDALR+FTIE++GETFNET+IPLR
Sbjct: 677  YIHQGHFLLTPLSYETLEFAASFSSDQCAEGVVAVAGDALRVFTIERLGETFNETVIPLR 736

Query: 348  YTPRKLVHHPNGKHLIAIESEQGAFSAEERKAARKECLKAVGMEVNGNHNAQQVGNSNDD 169
            YTPRK V  P  K L+ IES+QGAF+AEER+AA+KEC +A GM  NGN N +Q+ N  DD
Sbjct: 737  YTPRKFVLQPKRKLLVVIESDQGAFAAEEREAAKKECFEAAGMGENGNGNVEQMENGGDD 796

Query: 168  EEICGSLSDEQ 136
            E+    LSDEQ
Sbjct: 797  EDKDDPLSDEQ 807



 Score = 85.5 bits (210), Expect(2) = e-103
 Identities = 36/46 (78%), Positives = 43/46 (93%)
 Frame = -2

Query: 139 AEAQKWVSCIRVIEPRTETTTCLLELQDNEAAFGVCTVNFNNKEYG 2
           AE+ KWVSCIR+++PRT TTTCLLELQDNEAAF +CTVNF++KEYG
Sbjct: 813 AESDKWVSCIRILDPRTATTTCLLELQDNEAAFSICTVNFHDKEYG 858


>ref|XP_002312063.1| predicted protein [Populus trichocarpa] gi|222851883|gb|EEE89430.1|
            predicted protein [Populus trichocarpa]
          Length = 1213

 Score =  306 bits (783), Expect(2) = 4e-99
 Identities = 157/253 (62%), Positives = 190/253 (75%)
 Frame = -3

Query: 894  KRKASFLAVGSHDNTIRILSLDPDDCMKIXXXXXXXXXXXXXXXLDARASVGGEDGVYHP 715
            ++++ FLAVGS+DNTIR+LSLDPDDCM+I               L+ +AS+GGEDG  HP
Sbjct: 596  RQRSRFLAVGSYDNTIRVLSLDPDDCMQILSVQSVSAPPESLLFLEVQASIGGEDGADHP 655

Query: 714  VGVFLNVGLQSCVLYRTVVDMVTGQLSDTHSRLLGLRAPKLFCALVRGRRALLCLSSKPW 535
              +FLN GLQ+ VL+RTVVDMVTGQLSD+ SR LGLRAPKLF   VRGRRA+LCLSS+PW
Sbjct: 656  ASLFLNAGLQTGVLFRTVVDMVTGQLSDSRSRFLGLRAPKLFAINVRGRRAMLCLSSRPW 715

Query: 534  LGYIHGGNFLLTPLXXXXXXXXXXXXXSQCAEGVVAVTGDALRIFTIEQVGETFNETMIP 355
            LGYIH G+FLLTPL              QCAEGVVAV GDALRIFTIE++GETFNET IP
Sbjct: 716  LGYIHQGHFLLTPLSYETLEYAASFSSDQCAEGVVAVAGDALRIFTIERLGETFNETAIP 775

Query: 354  LRYTPRKLVHHPNGKHLIAIESEQGAFSAEERKAARKECLKAVGMEVNGNHNAQQVGNSN 175
            LRYTPRK V  P  K L+ IES+QGA++AEER+AA+KEC +A GM  NG+ NA+++ N +
Sbjct: 776  LRYTPRKFVLQPKRKLLVIIESDQGAYTAEEREAAKKECFEAAGMGENGSANAEKMENGD 835

Query: 174  DDEEICGSLSDEQ 136
            DD++    LSDEQ
Sbjct: 836  DDDK-DDPLSDEQ 847



 Score = 82.8 bits (203), Expect(2) = 4e-99
 Identities = 36/46 (78%), Positives = 43/46 (93%)
 Frame = -2

Query: 139 AEAQKWVSCIRVIEPRTETTTCLLELQDNEAAFGVCTVNFNNKEYG 2
           AEA +WVSCIRV++PR+ TTTCLLELQDNEAAF VCTVNF++KE+G
Sbjct: 853 AEADRWVSCIRVLDPRSATTTCLLELQDNEAAFSVCTVNFHDKEHG 898


>ref|XP_002534515.1| spliceosomal protein sap, putative [Ricinus communis]
            gi|223525135|gb|EEF27867.1| spliceosomal protein sap,
            putative [Ricinus communis]
          Length = 1214

 Score =  302 bits (774), Expect(2) = 2e-98
 Identities = 159/253 (62%), Positives = 187/253 (73%)
 Frame = -3

Query: 894  KRKASFLAVGSHDNTIRILSLDPDDCMKIXXXXXXXXXXXXXXXLDARASVGGEDGVYHP 715
            ++++ FLAVGS DNTIRILSLDPDDCM+I               L+ +ASVG ED   HP
Sbjct: 597  RQRSRFLAVGSFDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGREDVADHP 656

Query: 714  VGVFLNVGLQSCVLYRTVVDMVTGQLSDTHSRLLGLRAPKLFCALVRGRRALLCLSSKPW 535
              +FLN GLQS VL+RT+VDMVTGQLSD+ SR LGLRAPKLF  LVRGRRA+LCLSS+PW
Sbjct: 657  ASLFLNAGLQSGVLFRTLVDMVTGQLSDSRSRFLGLRAPKLFSILVRGRRAMLCLSSRPW 716

Query: 534  LGYIHGGNFLLTPLXXXXXXXXXXXXXSQCAEGVVAVTGDALRIFTIEQVGETFNETMIP 355
            LGYIH G+FLLTPL              QCAEGVVAV GDALRIFTIE++GETFNET IP
Sbjct: 717  LGYIHQGHFLLTPLSYETLEFAASFSSDQCAEGVVAVAGDALRIFTIERLGETFNETAIP 776

Query: 354  LRYTPRKLVHHPNGKHLIAIESEQGAFSAEERKAARKECLKAVGMEVNGNHNAQQVGNSN 175
            LRYTPRK V  P  K L+ +ES+QGA++AEER+AA+KEC +A GM  NG+ NA+Q+ N  
Sbjct: 777  LRYTPRKFVLQPKKKLLVIVESDQGAYTAEEREAAKKECFEAAGMGENGSANAEQMEN-G 835

Query: 174  DDEEICGSLSDEQ 136
            DDE+    LSDEQ
Sbjct: 836  DDEDKDDPLSDEQ 848



 Score = 84.3 bits (207), Expect(2) = 2e-98
 Identities = 37/46 (80%), Positives = 43/46 (93%)
 Frame = -2

Query: 139 AEAQKWVSCIRVIEPRTETTTCLLELQDNEAAFGVCTVNFNNKEYG 2
           AEA+KWVSCIRV++PRT  TTCLLELQDNEAAF VCTVNF++KE+G
Sbjct: 854 AEAEKWVSCIRVLDPRTAATTCLLELQDNEAAFSVCTVNFHDKEHG 899


>ref|XP_004147708.1| PREDICTED: splicing factor 3B subunit 3-like [Cucumis sativus]
            gi|449513493|ref|XP_004164340.1| PREDICTED: splicing
            factor 3B subunit 3-like [Cucumis sativus]
          Length = 1214

 Score =  299 bits (766), Expect(2) = 6e-98
 Identities = 154/252 (61%), Positives = 182/252 (72%)
 Frame = -3

Query: 894  KRKASFLAVGSHDNTIRILSLDPDDCMKIXXXXXXXXXXXXXXXLDARASVGGEDGVYHP 715
            ++++ FLAVGS+DNTIRILSLDPDDCM+I               L+  ASVGGEDG  HP
Sbjct: 596  RQRSRFLAVGSYDNTIRILSLDPDDCMQILSVQSVSAAPESLLFLEVLASVGGEDGADHP 655

Query: 714  VGVFLNVGLQSCVLYRTVVDMVTGQLSDTHSRLLGLRAPKLFCALVRGRRALLCLSSKPW 535
              +FLN  L S VL+RTVVDMVTGQLSD+ SR LGLRAPKLF  ++RGRRA+LCLSS+PW
Sbjct: 656  ASLFLNAALHSGVLFRTVVDMVTGQLSDSRSRFLGLRAPKLFSVVLRGRRAILCLSSRPW 715

Query: 534  LGYIHGGNFLLTPLXXXXXXXXXXXXXSQCAEGVVAVTGDALRIFTIEQVGETFNETMIP 355
            LGYIH G+FLLTPL              QCAEGVVAV G+ LR+FTIE++GETFNET+IP
Sbjct: 716  LGYIHQGHFLLTPLSYETLEYASSFSSDQCAEGVVAVAGNFLRVFTIERLGETFNETVIP 775

Query: 354  LRYTPRKLVHHPNGKHLIAIESEQGAFSAEERKAARKECLKAVGMEVNGNHNAQQVGNSN 175
            LRYTPRK V  P  K L+ IES+QGAF+AEER+AA+KEC +A G   NGN    Q+ N  
Sbjct: 776  LRYTPRKFVLQPRRKLLVVIESDQGAFTAEEREAAKKECFEAAGAGENGNGTMDQMENGG 835

Query: 174  DDEEICGSLSDE 139
            DDE+    LSDE
Sbjct: 836  DDEDKDDPLSDE 847



 Score = 85.5 bits (210), Expect(2) = 6e-98
 Identities = 37/46 (80%), Positives = 44/46 (95%)
 Frame = -2

Query: 139 AEAQKWVSCIRVIEPRTETTTCLLELQDNEAAFGVCTVNFNNKEYG 2
           AE++KWVSCIRV++PR+ TTTCLLELQDNEAAF VCTVNF++KEYG
Sbjct: 854 AESEKWVSCIRVLDPRSATTTCLLELQDNEAAFSVCTVNFHDKEYG 899