BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018125
         (1272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134699.1| PREDICTED: 30S ribosomal protein S5, chlorop...   355   1e-95
ref|XP_002305129.1| predicted protein [Populus trichocarpa] gi|1...   353   5e-95
ref|XP_002509457.1| 30S ribosomal protein S5, putative [Ricinus ...   349   8e-94
ref|XP_003529335.1| PREDICTED: 30S ribosomal protein S5, chlorop...   345   1e-92
ref|XP_003542738.1| PREDICTED: 30S ribosomal protein S5, chlorop...   343   4e-92

>ref|XP_004134699.1| PREDICTED: 30S ribosomal protein S5, chloroplastic-like [Cucumis
            sativus] gi|449479289|ref|XP_004155560.1| PREDICTED: 30S
            ribosomal protein S5, chloroplastic-like [Cucumis
            sativus]
          Length = 307

 Score =  355 bits (912), Expect = 1e-95
 Identities = 177/253 (69%), Positives = 199/253 (78%)
 Frame = -3

Query: 1027 KANSNDVDTTFFDEVNPEEEIVFDPPTIPEGYIPPTPFDEGPVETEDEIAAAYEELYGPA 848
            +A S+D+DTTFFD VNP+E+IV+DPP +PEG++PP  FDEGP+ETE+EIAA YEE+YGPA
Sbjct: 55   RAKSSDIDTTFFDNVNPQEDIVYDPPEVPEGFVPPPSFDEGPIETEEEIAAGYEEIYGPA 114

Query: 847  YSGVSVLGNDVYVMDAKIKKQTGFGSKTKKEKVRDGFDEXXXXXXXXXXXXXXXXQLHFR 668
            YSGVSVLGND+YVMD+K+KK  GFGSK KK+K RDGFDE                QLHFR
Sbjct: 115  YSGVSVLGNDIYVMDSKVKKAGGFGSKAKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFR 174

Query: 667  XXXXXXXXXXXXXXXXXXXXXXXXXVQKSAVNARRNIITVPMTKYATFPHRADGDYGAAK 488
                                     VQKSAVNARRNI+TVPMTKY TFPHR++GDYGAAK
Sbjct: 175  AIVVVGDKQGQVGVGVGKAKEVITAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAK 234

Query: 487  VMLRPASPGTGVIAGGSVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQSMRQFSDV 308
            VMLRPASPGTGVIAGG+VRIVLEMAGVENALGKQLGSNNALNNARATVVAVQ M+QF DV
Sbjct: 235  VMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDV 294

Query: 307  ARERGIPMEELWK 269
            A+ERGIPMEELWK
Sbjct: 295  AQERGIPMEELWK 307


>ref|XP_002305129.1| predicted protein [Populus trichocarpa] gi|118487850|gb|ABK95748.1|
            unknown [Populus trichocarpa] gi|222848093|gb|EEE85640.1|
            predicted protein [Populus trichocarpa]
          Length = 311

 Score =  353 bits (906), Expect = 5e-95
 Identities = 192/313 (61%), Positives = 216/313 (69%), Gaps = 6/313 (1%)
 Frame = -3

Query: 1189 MAASATTLSSYS------PLTTFLKTHPTSNHXXXXXXXXXXXXXXXXXXXKPNTPHKPL 1028
            MA +  TLSS S      P  +F+K  PTS                      P       
Sbjct: 1    MAITTVTLSSLSLHSTTTPRLSFIK--PTSKLHPLSLSISPKSSFLSPLSYHPKIITIIT 58

Query: 1027 KANSNDVDTTFFDEVNPEEEIVFDPPTIPEGYIPPTPFDEGPVETEDEIAAAYEELYGPA 848
            KANS+D+DT+FFD +NPEEE V+DPPT PE YIPP  FDEGP+ETE+EIAAAYEELYGPA
Sbjct: 59   KANSSDIDTSFFDNLNPEEEFVYDPPTPPEDYIPPPSFDEGPIETEEEIAAAYEELYGPA 118

Query: 847  YSGVSVLGNDVYVMDAKIKKQTGFGSKTKKEKVRDGFDEXXXXXXXXXXXXXXXXQLHFR 668
            YSGVSVLG D+YVMD+K+KK +G+GS+ KKEK++DGFDE                QLHFR
Sbjct: 119  YSGVSVLGKDIYVMDSKVKKTSGWGSRVKKEKIKDGFDERVVQVRRVTKVVKGGKQLHFR 178

Query: 667  XXXXXXXXXXXXXXXXXXXXXXXXXVQKSAVNARRNIITVPMTKYATFPHRADGDYGAAK 488
                                     VQKSA+NARRNIITVPMTKY TFPHR++GD+GAAK
Sbjct: 179  AVVIVGDKQGRVGVGVGKAKEVIVAVQKSALNARRNIITVPMTKYLTFPHRSEGDFGAAK 238

Query: 487  VMLRPASPGTGVIAGGSVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQSMRQFSDV 308
            VMLRPASPGTGVIAGG+VRIVLEMAGVENALGKQL S NALNNARATVVAVQ MRQFS+V
Sbjct: 239  VMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLRSKNALNNARATVVAVQKMRQFSEV 298

Query: 307  ARERGIPMEELWK 269
            ARERGIPMEELWK
Sbjct: 299  ARERGIPMEELWK 311


>ref|XP_002509457.1| 30S ribosomal protein S5, putative [Ricinus communis]
            gi|223549356|gb|EEF50844.1| 30S ribosomal protein S5,
            putative [Ricinus communis]
          Length = 309

 Score =  349 bits (896), Expect = 8e-94
 Identities = 178/252 (70%), Positives = 197/252 (78%)
 Frame = -3

Query: 1024 ANSNDVDTTFFDEVNPEEEIVFDPPTIPEGYIPPTPFDEGPVETEDEIAAAYEELYGPAY 845
            A+S+D+DTTFFD +NPE++IVFDPPT PE ++PP  FDE P+ETE+EIAAAYE+LYG  Y
Sbjct: 58   ASSSDIDTTFFDNLNPEDDIVFDPPTPPEDFVPPPSFDEEPMETEEEIAAAYEDLYGAGY 117

Query: 844  SGVSVLGNDVYVMDAKIKKQTGFGSKTKKEKVRDGFDEXXXXXXXXXXXXXXXXQLHFRX 665
            SGVS LGNDVYVMD+K+KK TGFGSK K+EK+RDGF+E                QLHFR 
Sbjct: 118  SGVSYLGNDVYVMDSKVKKTTGFGSKGKREKIRDGFEERVVQVRRVTKVVKGGKQLHFRA 177

Query: 664  XXXXXXXXXXXXXXXXXXXXXXXXVQKSAVNARRNIITVPMTKYATFPHRADGDYGAAKV 485
                                    VQKSAVNARRNIITVPMTKY TFPHR+DGDYGAAKV
Sbjct: 178  IVVVGDKQGQVGVGVGKAKEVIAAVQKSAVNARRNIITVPMTKYLTFPHRSDGDYGAAKV 237

Query: 484  MLRPASPGTGVIAGGSVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQSMRQFSDVA 305
            MLRPASPGTGVIAGG+VRIVLEMAGVENALGKQ+GS NALNNARATVVAVQ MRQFSDVA
Sbjct: 238  MLRPASPGTGVIAGGAVRIVLEMAGVENALGKQIGSKNALNNARATVVAVQKMRQFSDVA 297

Query: 304  RERGIPMEELWK 269
            RERGIPMEELWK
Sbjct: 298  RERGIPMEELWK 309


>ref|XP_003529335.1| PREDICTED: 30S ribosomal protein S5, chloroplastic-like [Glycine max]
          Length = 300

 Score =  345 bits (885), Expect = 1e-92
 Identities = 176/250 (70%), Positives = 194/250 (77%)
 Frame = -3

Query: 1018 SNDVDTTFFDEVNPEEEIVFDPPTIPEGYIPPTPFDEGPVETEDEIAAAYEELYGPAYSG 839
            S+D+DT+FFD +NP+++I F+PP  PEG++ P  FD+GP+ETEDEIAAAYEELYGP YSG
Sbjct: 51   SDDIDTSFFDNINPQDDITFNPPEPPEGFVAPPSFDDGPLETEDEIAAAYEELYGPGYSG 110

Query: 838  VSVLGNDVYVMDAKIKKQTGFGSKTKKEKVRDGFDEXXXXXXXXXXXXXXXXQLHFRXXX 659
            VSVLGNDVYVMDAK+KK+TGFGS  KKEKVRDGF+E                QL FR   
Sbjct: 111  VSVLGNDVYVMDAKVKKETGFGSGAKKEKVRDGFEERVVQVRRVTKVVKGGKQLRFRAVV 170

Query: 658  XXXXXXXXXXXXXXXXXXXXXXVQKSAVNARRNIITVPMTKYATFPHRADGDYGAAKVML 479
                                  VQKSAVNARRNII VPMTKY+TFPHRADGDYGAAKVML
Sbjct: 171  VVGDKKGSVGVGVGKAKEVIAAVQKSAVNARRNIIKVPMTKYSTFPHRADGDYGAAKVML 230

Query: 478  RPASPGTGVIAGGSVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQSMRQFSDVARE 299
            RPASPGTGVIAGGSVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQ M+QF +VA E
Sbjct: 231  RPASPGTGVIAGGSVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFREVAEE 290

Query: 298  RGIPMEELWK 269
            RGIPMEELWK
Sbjct: 291  RGIPMEELWK 300


>ref|XP_003542738.1| PREDICTED: 30S ribosomal protein S5, chloroplastic-like [Glycine max]
          Length = 316

 Score =  343 bits (881), Expect = 4e-92
 Identities = 178/263 (67%), Positives = 197/263 (74%), Gaps = 5/263 (1%)
 Frame = -3

Query: 1042 PHKPL-----KANSNDVDTTFFDEVNPEEEIVFDPPTIPEGYIPPTPFDEGPVETEDEIA 878
            P KPL        S+D+DT+FFD +NP+++I F+PP  PEG++ P  FD+GP+ETEDEIA
Sbjct: 54   PSKPLFLTLKSKPSDDIDTSFFDNINPQDDITFNPPEPPEGFVAPPSFDDGPLETEDEIA 113

Query: 877  AAYEELYGPAYSGVSVLGNDVYVMDAKIKKQTGFGSKTKKEKVRDGFDEXXXXXXXXXXX 698
            AAYEELYGP YSGVSVLGNDVYVMDAK+KK+TGFGS  KKEKVRDGF+E           
Sbjct: 114  AAYEELYGPGYSGVSVLGNDVYVMDAKVKKETGFGSGAKKEKVRDGFEERVVQVRRVTKV 173

Query: 697  XXXXXQLHFRXXXXXXXXXXXXXXXXXXXXXXXXXVQKSAVNARRNIITVPMTKYATFPH 518
                 QL FR                         VQKSAVNARRNII VPMTKY+TFPH
Sbjct: 174  VKGGKQLRFRAVVVVGDKKGQVGVGVGKAKEVIAAVQKSAVNARRNIIKVPMTKYSTFPH 233

Query: 517  RADGDYGAAKVMLRPASPGTGVIAGGSVRIVLEMAGVENALGKQLGSNNALNNARATVVA 338
            RADGDYGAAKVMLRPASPGTGVIAGGSVRIVLEMAGV+NALGKQLGSNNALNNARATV A
Sbjct: 234  RADGDYGAAKVMLRPASPGTGVIAGGSVRIVLEMAGVDNALGKQLGSNNALNNARATVAA 293

Query: 337  VQSMRQFSDVARERGIPMEELWK 269
            VQ M+QF +VA ERGIPMEELWK
Sbjct: 294  VQKMKQFREVAEERGIPMEELWK 316