BLASTX nr result

ID: Coptis21_contig00018119 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018119
         (676 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25124.3| unnamed protein product [Vitis vinifera]              123   4e-26
ref|XP_002522773.1| Pre-mRNA-splicing factor cwc23, putative [Ri...   122   6e-26
ref|XP_002275857.1| PREDICTED: dnaJ homolog subfamily C member 1...   121   1e-25
ref|XP_004163417.1| PREDICTED: LOW QUALITY PROTEIN: dnaJ homolog...   117   2e-24
ref|XP_004144862.1| PREDICTED: dnaJ homolog subfamily C member 1...   117   2e-24

>emb|CBI25124.3| unnamed protein product [Vitis vinifera]
          Length = 341

 Score =  123 bits (308), Expect = 4e-26
 Identities = 69/156 (44%), Positives = 88/156 (56%)
 Frame = +3

Query: 117 EKKRMEIEIDHYEILGLPSGEEGSKLSLDEIKTAYKKKSLKIHPDKNLNNPNAATEFKTL 296
           ++K M++ +DHY +LGLPSGEEG+KLS  EI  AY+ K+L++HPDK  ++P A   F+ L
Sbjct: 52  KEKIMDMNVDHYNVLGLPSGEEGAKLSEKEISKAYRVKALELHPDKRPDDPQAHANFQKL 111

Query: 297 SASYKILKDEAARKLYDDLLXXXXXXXXXXXXXXXXXXXXXAAYGVKRRTMMNDLEERER 476
             SY+ILKDE ARKL+DDLL                     A Y VKRR M++DLEERER
Sbjct: 112 KTSYEILKDEKARKLFDDLL-----------RVKREQFHRQAQYDVKRRRMVSDLEERER 160

Query: 477 ASFAVDPVGKXXXXXXXXXXXXXXXXXXXXXMHAKK 584
           A+ A DP  K                     MHA K
Sbjct: 161 AANAPDPASKAREEEERITKKLKEEIARIRAMHANK 196


>ref|XP_002522773.1| Pre-mRNA-splicing factor cwc23, putative [Ricinus communis]
           gi|223538011|gb|EEF39624.1| Pre-mRNA-splicing factor
           cwc23, putative [Ricinus communis]
          Length = 289

 Score =  122 bits (306), Expect = 6e-26
 Identities = 69/156 (44%), Positives = 89/156 (57%)
 Frame = +3

Query: 129 MEIEIDHYEILGLPSGEEGSKLSLDEIKTAYKKKSLKIHPDKNLNNPNAATEFKTLSASY 308
           M+I+IDHYE+LGL SGEEG+KL+ +EI  AYKKK+L++HPDK  ++P+A   F+ L +SY
Sbjct: 1   MDIDIDHYEVLGLASGEEGAKLTENEISKAYKKKALELHPDKRRDDPDAHANFQKLKSSY 60

Query: 309 KILKDEAARKLYDDLLXXXXXXXXXXXXXXXXXXXXXAAYGVKRRTMMNDLEERERASFA 488
           +ILKDE ARKL+DDLL                          KR+ M++DLE RERA+FA
Sbjct: 61  EILKDEKARKLFDDLLRVKRERYVHSFQRDS-----------KRQKMVSDLEARERAAFA 109

Query: 489 VDPVGKXXXXXXXXXXXXXXXXXXXXXMHAKKSGMA 596
            DPV K                     MHA K   A
Sbjct: 110 PDPVAKAREEEDMIARKLKEEIERIRAMHANKGAHA 145


>ref|XP_002275857.1| PREDICTED: dnaJ homolog subfamily C member 17-like [Vitis vinifera]
          Length = 286

 Score =  121 bits (304), Expect = 1e-25
 Identities = 68/152 (44%), Positives = 85/152 (55%)
 Frame = +3

Query: 129 MEIEIDHYEILGLPSGEEGSKLSLDEIKTAYKKKSLKIHPDKNLNNPNAATEFKTLSASY 308
           M++ +DHY +LGLPSGEEG+KLS  EI  AY+ K+L++HPDK  ++P A   F+ L  SY
Sbjct: 1   MDMNVDHYNVLGLPSGEEGAKLSEKEISKAYRVKALELHPDKRPDDPQAHANFQKLKTSY 60

Query: 309 KILKDEAARKLYDDLLXXXXXXXXXXXXXXXXXXXXXAAYGVKRRTMMNDLEERERASFA 488
           +ILKDE ARKL+DDLL                     A Y VKRR M++DLEERERA+ A
Sbjct: 61  EILKDEKARKLFDDLL-----------RVKREQFHRQAQYDVKRRRMVSDLEERERAANA 109

Query: 489 VDPVGKXXXXXXXXXXXXXXXXXXXXXMHAKK 584
            DP  K                     MHA K
Sbjct: 110 PDPASKAREEEERITKKLKEEIARIRAMHANK 141


>ref|XP_004163417.1| PREDICTED: LOW QUALITY PROTEIN: dnaJ homolog subfamily C member
           17-like [Cucumis sativus]
          Length = 290

 Score =  117 bits (293), Expect = 2e-24
 Identities = 66/150 (44%), Positives = 86/150 (57%)
 Frame = +3

Query: 135 IEIDHYEILGLPSGEEGSKLSLDEIKTAYKKKSLKIHPDKNLNNPNAATEFKTLSASYKI 314
           +++DHY ILGLPSGE+G+KL+  EI  AY+ K+L++HPDK  ++PNA   F+TL +SY+I
Sbjct: 1   MDVDHYAILGLPSGEQGAKLTEKEISKAYRAKALELHPDKRPDDPNAHANFQTLKSSYEI 60

Query: 315 LKDEAARKLYDDLLXXXXXXXXXXXXXXXXXXXXXAAYGVKRRTMMNDLEERERASFAVD 494
           LKDE ARKL+DDLL                     +    KR+ MM DLE RER++FA D
Sbjct: 61  LKDEKARKLFDDLL-----------RVKREQHRRQSERDSKRQKMMTDLEARERSAFAPD 109

Query: 495 PVGKXXXXXXXXXXXXXXXXXXXXXMHAKK 584
           P  K                     MHAKK
Sbjct: 110 PAAKELEEEEXIARKLKEEIARIRAMHAKK 139


>ref|XP_004144862.1| PREDICTED: dnaJ homolog subfamily C member 17-like [Cucumis
           sativus]
          Length = 290

 Score =  117 bits (293), Expect = 2e-24
 Identities = 65/150 (43%), Positives = 85/150 (56%)
 Frame = +3

Query: 135 IEIDHYEILGLPSGEEGSKLSLDEIKTAYKKKSLKIHPDKNLNNPNAATEFKTLSASYKI 314
           +++DHY ILGLPSGE+G+KL+  EI  AY+ K+L++HPDK  ++PNA   F+TL +SY+I
Sbjct: 1   MDVDHYAILGLPSGEQGAKLTEKEISKAYRAKALELHPDKRPDDPNAHANFQTLKSSYEI 60

Query: 315 LKDEAARKLYDDLLXXXXXXXXXXXXXXXXXXXXXAAYGVKRRTMMNDLEERERASFAVD 494
           LKDE ARKL+DDLL                     +    KR+ MM DLE RER++FA D
Sbjct: 61  LKDEKARKLFDDLL-----------RVKREQHRRQSERDSKRQKMMTDLEARERSAFAPD 109

Query: 495 PVGKXXXXXXXXXXXXXXXXXXXXXMHAKK 584
           P  K                     MHAKK
Sbjct: 110 PAAKELEEEEKIARKLKEEIARIRAMHAKK 139


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