BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018097
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28363.3| unnamed protein product [Vitis vinifera]               90   2e-16
ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    69   5e-10
ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containi...    69   5e-10
ref|XP_002269762.1| PREDICTED: pentatricopeptide repeat-containi...    68   9e-10
ref|XP_002284293.1| PREDICTED: pentatricopeptide repeat-containi...    65   7e-09

>emb|CBI28363.3| unnamed protein product [Vitis vinifera]
          Length = 930

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 47/88 (53%), Positives = 60/88 (68%)
 Frame = +1

Query: 10  LQTNRITTHDVKKLKRIHARETHARTKSTILFFNLYLQLYASVGLMHEAQTLFDEMPERT 189
           LQ+N I      KLK I   E HART+     FNLYL++Y + G M EA+ LFDEMPER+
Sbjct: 29  LQSNHIAQ---TKLKPIPQNEIHARTR----LFNLYLRMYVNAGAMQEARKLFDEMPERS 81

Query: 190 LISWTVLMSGYTRHGYADETLGVFHNMV 273
           L+SWT++MSGY RHG A E L +F +M+
Sbjct: 82  LVSWTIVMSGYARHGPASEVLMMFWDML 109


>ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g24000, mitochondrial-like [Cucumis sativus]
          Length = 677

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 31/78 (39%), Positives = 49/78 (62%)
 Frame = +1

Query: 40  VKKLKRIHARETHARTKSTILFFNLYLQLYASVGLMHEAQTLFDEMPERTLISWTVLMSG 219
           +K+ + IHA    +  +  ++  N  L +YA  G + EAQ LFD+MP + ++SWTVL+SG
Sbjct: 121 LKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISG 180

Query: 220 YTRHGYADETLGVFHNMV 273
           Y++ G A E L +F  M+
Sbjct: 181 YSQSGQASEALALFPKML 198


>ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Cucumis sativus]
          Length = 678

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 31/78 (39%), Positives = 49/78 (62%)
 Frame = +1

Query: 40  VKKLKRIHARETHARTKSTILFFNLYLQLYASVGLMHEAQTLFDEMPERTLISWTVLMSG 219
           +K+ + IHA    +  +  ++  N  L +YA  G + EAQ LFD+MP + ++SWTVL+SG
Sbjct: 121 LKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISG 180

Query: 220 YTRHGYADETLGVFHNMV 273
           Y++ G A E L +F  M+
Sbjct: 181 YSQSGQASEALALFPKML 198


>ref|XP_002269762.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 906

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 29/50 (58%), Positives = 39/50 (78%)
 Frame = +1

Query: 124 LYASVGLMHEAQTLFDEMPERTLISWTVLMSGYTRHGYADETLGVFHNMV 273
           +Y + G M EA+ LFDEMPER+L+SWT++MSGY RHG A E L +F +M+
Sbjct: 1   MYVNAGAMQEARKLFDEMPERSLVSWTIVMSGYARHGPASEVLMMFWDML 50


>ref|XP_002284293.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g18520-like [Vitis vinifera]
          Length = 595

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 28/79 (35%), Positives = 50/79 (63%)
 Frame = +1

Query: 40  VKKLKRIHARETHARTKSTILFFNLYLQLYASVGLMHEAQTLFDEMPERTLISWTVLMSG 219
           V++++R+HA        S     N  +  Y+  G + EA+ +FD+MPER ++SWT +++G
Sbjct: 79  VREVRRVHAVVFKCLDNSVTYVNNNLISAYSRFGKLVEARKVFDKMPERNVVSWTAVVNG 138

Query: 220 YTRHGYADETLGVFHNMVE 276
           Y+R+G+ DE L +F + +E
Sbjct: 139 YSRYGFDDEALRLFDDCIE 157