BLASTX nr result

ID: Coptis21_contig00018084 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018084
         (995 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70078.1| hypothetical protein VITISV_001036 [Vitis vinifera]   157   4e-36
ref|XP_003536822.1| PREDICTED: uncharacterized protein LOC100800...   130   4e-28
ref|XP_003618978.1| Galactose-1-phosphate uridylyltransferase [M...   129   1e-27
ref|XP_003533467.1| PREDICTED: uncharacterized protein LOC100782...   127   5e-27
ref|XP_003518690.1| PREDICTED: uncharacterized protein LOC100805...   125   2e-26

>emb|CAN70078.1| hypothetical protein VITISV_001036 [Vitis vinifera]
          Length = 773

 Score =  157 bits (397), Expect = 4e-36
 Identities = 94/233 (40%), Positives = 130/233 (55%), Gaps = 13/233 (5%)
 Frame = -1

Query: 692 SRDELLKWT*ELGKSVGMVIVIKKSDLGSVAGRTPRIVFGCERFGKYK---VKKGS--KQ 528
           SR+ L++W  E GK  GMVI+I+++D+G+     PRI F CER G Y+     KG   K+
Sbjct: 15  SREALIEWVRETGKRNGMVIIIQRADIGATNRSRPRITFVCERSGAYRHTGXDKGEEGKK 74

Query: 527 QLPTEQTKSKKCDCPFVLKGIKMPKYDQWVVKVECGLHSHPHGLCPEGHSYAGKLTAEEE 348
           +   + T +KKC CPF L+GIK+P  D+W + V+CG H+HP G   EGHS+AG+L+ EE 
Sbjct: 75  KRKRKATGTKKCGCPFSLRGIKLPLADEWTLVVKCGTHNHPGGQHVEGHSFAGRLSMEEI 134

Query: 347 AIVREMSLSGLKPKEVLNVLKERDTHNATTRTTIYNIRQKLKLTRKSRKSQCNS*HIYLF 168
            I+ ++S S +KPKE+LN LKERD  N TT   IYN R K K    +  S        + 
Sbjct: 135 GILIDLSKSQMKPKEILNTLKERDGLNCTTIKGIYNARHKHKANENAGGS-------LMQ 187

Query: 167 KLSNTVMSL-----GRNSQHHLC---KSFAEPKCKLLALAYVSIC*TLLNEMT 33
           +L N +M        RN +H+ C     FA P    L  A+  +      E T
Sbjct: 188 QLMNKLMEFKYIEWHRNDEHNNCVRDLMFAHPSSLELLRAFPRVVGVTSTEKT 240


>ref|XP_003536822.1| PREDICTED: uncharacterized protein LOC100800409 [Glycine max]
          Length = 877

 Score =  130 bits (328), Expect = 4e-28
 Identities = 67/185 (36%), Positives = 109/185 (58%), Gaps = 7/185 (3%)
 Frame = -1

Query: 728 CSIGLQ*SQVFNSRDELLKWT*ELGKSVGMVIVIKKSDLGSVAGRTPR-------IVFGC 570
           CS     ++VF SR+ +L W  ++ K  G V++I +S+  +   R+ R       ++ GC
Sbjct: 26  CSDAFNTTEVFPSREAMLNWARDVAKENGFVLIILRSETSTTCTRSTRCNQRKTFVIMGC 85

Query: 569 ERFGKYKVKKGSKQQLPTEQTKSKKCDCPFVLKGIKMPKYDQWVVKVECGLHSHPHGLCP 390
           +R GKY+     K +L  + + ++KC+CPF LKG  + K + W+VKV CG H+H      
Sbjct: 86  DRSGKYRGPY--KNELSRKVSGTRKCECPFKLKGKALKKAEGWIVKVMCGCHNHDLEETL 143

Query: 389 EGHSYAGKLTAEEEAIVREMSLSGLKPKEVLNVLKERDTHNATTRTTIYNIRQKLKLTRK 210
            GH YAG+L+AEE+++V  ++ S +KPK++L  LK+ +  N TT   IYN RQ  + ++K
Sbjct: 144 VGHPYAGRLSAEEKSLVDALTKSMMKPKDILLTLKDHNMGNVTTIKQIYNARQAYRSSKK 203

Query: 209 SRKSQ 195
             + Q
Sbjct: 204 GSEMQ 208


>ref|XP_003618978.1| Galactose-1-phosphate uridylyltransferase [Medicago truncatula]
           gi|355493993|gb|AES75196.1| Galactose-1-phosphate
           uridylyltransferase [Medicago truncatula]
          Length = 679

 Score =  129 bits (323), Expect = 1e-27
 Identities = 66/167 (39%), Positives = 102/167 (61%), Gaps = 3/167 (1%)
 Frame = -1

Query: 704 QVFNSRDELLKWT*ELGKSVGMVIVIKKSDLGSVA---GRTPRIVFGCERFGKYKVKKGS 534
           +VF +R+ LL W   +G+  G  ++I++SD G +    GR   ++ GCER GKY+  K +
Sbjct: 508 EVFPTREYLLNWARAIGREHGFTVIIQRSDNGGLKKRIGRKTTVILGCERSGKYRQYKDA 567

Query: 533 KQQLPTEQTKSKKCDCPFVLKGIKMPKYDQWVVKVECGLHSHPHGLCPEGHSYAGKLTAE 354
             +    +T +KKC CPF L+G  +   D W V V CG H+H       G +YAG+L+ E
Sbjct: 568 LAR----KTGTKKCGCPFRLRGRPVRNGDGWKVNVVCGFHNHEVIETAIGSTYAGRLSGE 623

Query: 353 EEAIVREMSLSGLKPKEVLNVLKERDTHNATTRTTIYNIRQKLKLTR 213
           E+++V +++ S  KPK++L  LKER+  N T+   IYN+RQ+LK +R
Sbjct: 624 EKSLVDDLTRSNYKPKDILQTLKERNEENLTSIKQIYNLRQQLKRSR 670


>ref|XP_003533467.1| PREDICTED: uncharacterized protein LOC100782358 [Glycine max]
          Length = 1403

 Score =  127 bits (318), Expect = 5e-27
 Identities = 72/185 (38%), Positives = 112/185 (60%), Gaps = 7/185 (3%)
 Frame = -1

Query: 728  CSIGLQ*SQVFNSRDELLKWT*ELGKSVGMVIVIKKSDLGS------VAGRTPRIVFGCE 567
            CS   + +++F SRD +L W  E+ K  G V+ I +S+  +      + G+T  ++ GCE
Sbjct: 797  CSDAFKTTELFPSRDAVLNWAREVAKENGFVLTILRSETHTGSNKKNIRGKT-YVILGCE 855

Query: 566  RFGKYKVKKGSKQQLPTEQTKSKKCDCPFVLKGIKMPKYDQWVVKVECGLHSHPHG-LCP 390
            R GKY+  K +  ++    T SKKC+CPF LKG  + K + W+VKV CG H+H  G    
Sbjct: 856  RSGKYRPYKNTLSKV----TSSKKCECPFKLKGKALNKDEGWIVKVMCGYHNHDLGETLV 911

Query: 389  EGHSYAGKLTAEEEAIVREMSLSGLKPKEVLNVLKERDTHNATTRTTIYNIRQKLKLTRK 210
             GHSYAG+LTAEE+++V +M+   ++P+ +L  LK  D +N TT   IYN RQ  + ++K
Sbjct: 912  VGHSYAGRLTAEEKSLVIDMTKKMVEPRNILLTLK--DHNNDTTIRHIYNARQAYRSSQK 969

Query: 209  SRKSQ 195
              +++
Sbjct: 970  GPRTE 974


>ref|XP_003518690.1| PREDICTED: uncharacterized protein LOC100805365 [Glycine max]
          Length = 878

 Score =  125 bits (314), Expect = 2e-26
 Identities = 66/188 (35%), Positives = 108/188 (57%), Gaps = 10/188 (5%)
 Frame = -1

Query: 728 CSIGLQ*SQVFNSRDELLKWT*ELGKSVGMVIVIKKSDLGSVAGRTPR----------IV 579
           CS     ++VF SR+ +L W  ++ K  G V++I +S+  + + +  R          ++
Sbjct: 26  CSDAFNTTEVFPSREAMLNWARDVAKENGFVLIILRSETSTRSTKYTRSTRCNQRKTFVI 85

Query: 578 FGCERFGKYKVKKGSKQQLPTEQTKSKKCDCPFVLKGIKMPKYDQWVVKVECGLHSHPHG 399
            GC+R GKY+     K  L  + + ++KC+CPF LKG  + K + W+VKV CG H+H   
Sbjct: 86  MGCDRSGKYRGPY--KNALSRKVSGTRKCECPFKLKGKALKKAEGWIVKVMCGCHNHDLE 143

Query: 398 LCPEGHSYAGKLTAEEEAIVREMSLSGLKPKEVLNVLKERDTHNATTRTTIYNIRQKLKL 219
               GH YAG+L+AEE+++V  ++ S +KPK++L  LK+ +  N TT   IYN RQ  + 
Sbjct: 144 ETLVGHPYAGRLSAEEKSLVDALTKSMMKPKDILLTLKDHNMGNVTTIKQIYNARQAYRS 203

Query: 218 TRKSRKSQ 195
           ++K  + Q
Sbjct: 204 SKKGSEMQ 211