BLASTX nr result

ID: Coptis21_contig00018081 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018081
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530560.1| conserved hypothetical protein [Ricinus comm...   158   4e-37
ref|XP_003544954.1| PREDICTED: uncharacterized protein LOC100784...   157   1e-36
gb|ACU23928.1| unknown [Glycine max]                                  157   1e-36
ref|XP_002305915.1| predicted protein [Populus trichocarpa] gi|1...   157   1e-36
ref|XP_004148910.1| PREDICTED: uncharacterized protein LOC101207...   154   7e-36

>ref|XP_002530560.1| conserved hypothetical protein [Ricinus communis]
           gi|223529898|gb|EEF31828.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 266

 Score =  158 bits (400), Expect = 4e-37
 Identities = 75/90 (83%), Positives = 79/90 (87%), Gaps = 1/90 (1%)
 Frame = +1

Query: 1   YIYAHHGIYAGAGKVIHFTRGAGLEVGTGTVLDRVIFSSSPS-PQDTPCPRCGDQSRLDG 177
           YIYAHHGIY G GKVIHFTRGAG E GTGTVLDR+IFSSSPS P D PCP C DQS+LDG
Sbjct: 26  YIYAHHGIYVGDGKVIHFTRGAGQETGTGTVLDRIIFSSSPSHPSDNPCPNCIDQSKLDG 85

Query: 178 VICSCLDCFLSGGDLYLFEYGVSPAFFLAK 267
           VI SCLDCFL+GG+LYLFEYGVSPA FLAK
Sbjct: 86  VISSCLDCFLAGGNLYLFEYGVSPAIFLAK 115


>ref|XP_003544954.1| PREDICTED: uncharacterized protein LOC100784269 [Glycine max]
          Length = 254

 Score =  157 bits (396), Expect = 1e-36
 Identities = 73/90 (81%), Positives = 79/90 (87%), Gaps = 1/90 (1%)
 Frame = +1

Query: 1   YIYAHHGIYAGAGKVIHFTRGAGLEVGTGTVLDRVIFSSSPS-PQDTPCPRCGDQSRLDG 177
           YIYAHHGIY G G VIHFTRGAG E+GTGTVLD ++FSSSPS   DTPCPRCGDQ+R DG
Sbjct: 26  YIYAHHGIYVGDGMVIHFTRGAGQEIGTGTVLDNLLFSSSPSHSSDTPCPRCGDQTRTDG 85

Query: 178 VICSCLDCFLSGGDLYLFEYGVSPAFFLAK 267
           VI SCLDCFL GG+LY+FEYGVSPAFFLAK
Sbjct: 86  VISSCLDCFLYGGNLYIFEYGVSPAFFLAK 115


>gb|ACU23928.1| unknown [Glycine max]
          Length = 254

 Score =  157 bits (396), Expect = 1e-36
 Identities = 73/90 (81%), Positives = 79/90 (87%), Gaps = 1/90 (1%)
 Frame = +1

Query: 1   YIYAHHGIYAGAGKVIHFTRGAGLEVGTGTVLDRVIFSSSPS-PQDTPCPRCGDQSRLDG 177
           YIYAHHGIY G G VIHFTRGAG E+GTGTVLD ++FSSSPS   DTPCPRCGDQ+R DG
Sbjct: 26  YIYAHHGIYVGDGMVIHFTRGAGQEIGTGTVLDNLLFSSSPSHSSDTPCPRCGDQTRTDG 85

Query: 178 VICSCLDCFLSGGDLYLFEYGVSPAFFLAK 267
           VI SCLDCFL GG+LY+FEYGVSPAFFLAK
Sbjct: 86  VISSCLDCFLYGGNLYIFEYGVSPAFFLAK 115


>ref|XP_002305915.1| predicted protein [Populus trichocarpa] gi|118481835|gb|ABK92854.1|
           unknown [Populus trichocarpa]
           gi|222848879|gb|EEE86426.1| predicted protein [Populus
           trichocarpa]
          Length = 254

 Score =  157 bits (396), Expect = 1e-36
 Identities = 73/90 (81%), Positives = 78/90 (86%), Gaps = 1/90 (1%)
 Frame = +1

Query: 1   YIYAHHGIYAGAGKVIHFTRGAGLEVGTGTVLDRVIFSSSPS-PQDTPCPRCGDQSRLDG 177
           Y+YAHHGIY G   VIHFTRGAG E+GTGTVLDR +FSSSPS P D PCP+CGDQSRLDG
Sbjct: 26  YLYAHHGIYVGDETVIHFTRGAGQEIGTGTVLDRFVFSSSPSHPSDNPCPKCGDQSRLDG 85

Query: 178 VICSCLDCFLSGGDLYLFEYGVSPAFFLAK 267
           VI SC+DCFLSGGDLYLFEY VSPA FLAK
Sbjct: 86  VISSCIDCFLSGGDLYLFEYDVSPALFLAK 115


>ref|XP_004148910.1| PREDICTED: uncharacterized protein LOC101207610 [Cucumis sativus]
           gi|449519990|ref|XP_004167017.1| PREDICTED:
           uncharacterized protein LOC101229705 isoform 1 [Cucumis
           sativus]
          Length = 254

 Score =  154 bits (389), Expect = 7e-36
 Identities = 69/89 (77%), Positives = 77/89 (86%)
 Frame = +1

Query: 1   YIYAHHGIYAGAGKVIHFTRGAGLEVGTGTVLDRVIFSSSPSPQDTPCPRCGDQSRLDGV 180
           YIYAHHGI+ G GKVIHFTRG GLE+G+GTVLDR + SSSP   D+PCP CGDQS  DGV
Sbjct: 26  YIYAHHGIFIGDGKVIHFTRGGGLEIGSGTVLDRFLVSSSPHSPDSPCPVCGDQSLGDGV 85

Query: 181 ICSCLDCFLSGGDLYLFEYGVSPAFFLAK 267
           ICSCLDCFL+GGDLY+FEYGV+P FFLAK
Sbjct: 86  ICSCLDCFLAGGDLYIFEYGVTPVFFLAK 114


Top