BLASTX nr result

ID: Coptis21_contig00018062 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018062
         (1401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270945.2| PREDICTED: trihelix transcription factor GT-...   491   e-136
ref|XP_002266062.1| PREDICTED: trihelix transcription factor GT-...   490   e-136
emb|CAN73236.1| hypothetical protein VITISV_030092 [Vitis vinifera]   486   e-135
ref|XP_004159556.1| PREDICTED: trihelix transcription factor GT-...   484   e-134
ref|XP_002514968.1| transcription factor, putative [Ricinus comm...   482   e-134

>ref|XP_002270945.2| PREDICTED: trihelix transcription factor GT-1 [Vitis vinifera]
          Length = 348

 Score =  491 bits (1263), Expect = e-136
 Identities = 239/357 (66%), Positives = 285/357 (79%)
 Frame = +3

Query: 132  MIELIENGAHHQHHHQQMILGESSGSDHEIRAPKKRAETWVQEETRSLINFRREVDGLFN 311
            MIE++ NG    H  QQMILG+SSG DHE +APKKRAETWVQ+ETRSLI FRR++D LFN
Sbjct: 1    MIEVVSNGGL-PHQQQQMILGDSSGEDHEPKAPKKRAETWVQDETRSLIAFRRDMDCLFN 59

Query: 312  TSKSNKHLWEQISCKMRDKGFDRSPTMCTDKWRNLLKEFKKARQQVRGSGSAAKMSYYKX 491
            TSKSNKHLWEQIS KMR+KGFDRSPTMCTDKWRNLLKEFKKA+ Q RGSGSA KMSYYK 
Sbjct: 60   TSKSNKHLWEQISAKMREKGFDRSPTMCTDKWRNLLKEFKKAKHQDRGSGSA-KMSYYKE 118

Query: 492  XXXXXXXXSKNAPYKSSTTAAVEAGSTKVDAYVQFDSSKGSEDSTIPFGPVEAVGRSTIN 671
                    SKNA YKS T +       KVD ++QF S KG +D++IPFGPVEA GR T+N
Sbjct: 119  IEEILKERSKNAHYKSPTMS-------KVDPFIQF-SDKGIDDTSIPFGPVEASGRPTLN 170

Query: 672  LERRIHNDGHSLXXXXXXXXXXXXLPPWNWRSTSGNGGESHSYGGRVITVKWGDFTRRIG 851
            LER++ +DGH L            +PPWNWR T G+GGES SYGGRVI+VKWGD+TRRIG
Sbjct: 171  LERQLDHDGHPLAITSADAVTANGVPPWNWRETPGSGGESQSYGGRVISVKWGDYTRRIG 230

Query: 852  IDGTADAIKEAIKSAFGLRTRRAFWLEDEDEVVRSLDRDMPLGPYMLHLDEGMTIKVCIF 1031
            IDGTADAIKEAIKSAF LRT+R FWLEDED+++R+LDRDMPLG Y LHLDEG+ IKVC +
Sbjct: 231  IDGTADAIKEAIKSAFRLRTKRGFWLEDEDQIIRTLDRDMPLGSYSLHLDEGIGIKVCHY 290

Query: 1032 DDSDRMPFQTEEKTLYTEDDFRDFLAHRGWTGLREMNDFRSVDSLNDLRPGAIYQGV 1202
            D+S+ +P  TEEKT YTE+DFRDFL  RGW+ LRE+N +R++D+++DLRP ++Y+G+
Sbjct: 291  DESEHIPVHTEEKTFYTEEDFRDFLTRRGWSSLRELNGYRNIDNMDDLRPDSLYRGM 347


>ref|XP_002266062.1| PREDICTED: trihelix transcription factor GT-1 isoform 1 [Vitis
            vinifera]
          Length = 378

 Score =  490 bits (1262), Expect = e-136
 Identities = 254/386 (65%), Positives = 291/386 (75%), Gaps = 14/386 (3%)
 Frame = +3

Query: 102  MYLSERRG-----------EMMIELI-ENGAHHQHHHQQMILGESSGSDHEIRAPKKRAE 245
            MYLSE+             EMM+E++  NG   Q   QQMIL ESSG DHE++APKKRAE
Sbjct: 1    MYLSEKARPIDFYKEGGGREMMLEVVANNGLSPQQQQQQMILAESSGEDHEMKAPKKRAE 60

Query: 246  TWVQEETRSLINFRREVDGLFNTSKSNKHLWEQISCKMRDKGFDRSPTMCTDKWRNLLKE 425
            TWVQEETR+LI+FRREVDGLFNTSKSNKHLWEQIS KMR+KGFDRSPTMCTDKWRNLLKE
Sbjct: 61   TWVQEETRNLISFRREVDGLFNTSKSNKHLWEQISAKMREKGFDRSPTMCTDKWRNLLKE 120

Query: 426  FKKARQQVRGSGS-AAKMSYYKXXXXXXXXXSKNAPYKSSTTAAVEAGSTKVDAYVQFDS 602
            FKKA+ Q R S S +AKM+YYK         SKN  YKS T +       KVD+Y+QF S
Sbjct: 121  FKKAKHQDRSSSSGSAKMAYYKELEELLRDRSKNGSYKSPTPS-------KVDSYIQF-S 172

Query: 603  SKGSEDSTIPFGPVEAVGRSTINLERRIHNDGHSLXXXXXXXXXXXXLPPWNWRSTSGNG 782
             KG ED+ IPFG VEA GRST+NLER + +DG  L            +PPWNWR T GNG
Sbjct: 173  DKGLEDAGIPFGSVEASGRSTVNLERPLDHDGDPLAITAADAVAASGVPPWNWRETPGNG 232

Query: 783  GESHS-YGGRVITVKWGDFTRRIGIDGTADAIKEAIKSAFGLRTRRAFWLEDEDEVVRSL 959
            GE HS YGGRVI+VKWG++TRRIGIDG   AIK+AIKSAF LRT+RAFWLEDED VVR L
Sbjct: 233  GEGHSSYGGRVISVKWGEYTRRIGIDGNLGAIKDAIKSAFNLRTKRAFWLEDEDGVVRCL 292

Query: 960  DRDMPLGPYMLHLDEGMTIKVCIFDDSDRMPFQTEEKTLYTEDDFRDFLAHRGWTGLREM 1139
            DRDMPLG Y LHLDEG+TIKVC++DD DR+  +TEEKTLYTE+DFRDFLA RG  GLRE+
Sbjct: 293  DRDMPLGNYTLHLDEGVTIKVCLYDDPDRITVRTEEKTLYTEEDFRDFLARRGLIGLREL 352

Query: 1140 NDFRSVDSLNDLRPGAIYQGVRLLGE 1217
              +RS  +L+DL  GA+YQGVRLLG+
Sbjct: 353  TGYRSFHTLDDLHSGAMYQGVRLLGD 378


>emb|CAN73236.1| hypothetical protein VITISV_030092 [Vitis vinifera]
          Length = 384

 Score =  486 bits (1250), Expect = e-135
 Identities = 244/384 (63%), Positives = 291/384 (75%), Gaps = 15/384 (3%)
 Frame = +3

Query: 96   LFMYLSERRG-EMMIELIENGAHHQHHHQQMILGESSGSDHEIRAPKKRAETWVQEETRS 272
            L  Y  E  G +MMIE++ NG    H  QQMILG+SSG DHE +APKKRAETWVQ+ETRS
Sbjct: 10   LDFYKEEEEGRDMMIEVVSNGGL-PHQQQQMILGDSSGEDHEPKAPKKRAETWVQDETRS 68

Query: 273  LINFRREVDGLFNTSKSNKHLWEQISCKMRDKGFDRSPTMCTDKWRNLLKEFKKARQQVR 452
            LI FRR++D LFNTSKSNKHLWEQIS KMR+KGFDRSPTMCTDKWRNLLKEFKKA+ Q R
Sbjct: 69   LIAFRRDMDCLFNTSKSNKHLWEQISAKMREKGFDRSPTMCTDKWRNLLKEFKKAKHQDR 128

Query: 453  GSGSAAKMSYYKXXXXXXXXXSKNAPYKSSTTAAVEAGSTKVDAYVQFDSSKGSEDSTIP 632
            GSGSA KMSYYK         SKNA YKS T +       KVD ++QF S KG +D++IP
Sbjct: 129  GSGSA-KMSYYKEIEEILKERSKNAHYKSPTMS-------KVDPFIQF-SDKGIDDTSIP 179

Query: 633  FGPVEAVGRSTINLERRIHNDGHSLXXXXXXXXXXXXLPPWNWRSTSGNGGESHSYGGRV 812
            FGPVEA GR T+NLER++ +DGH L            +PPWNWR T G+GGES SYGGRV
Sbjct: 180  FGPVEASGRPTLNLERQLDHDGHPLAITSADAVTANGVPPWNWRETPGSGGESQSYGGRV 239

Query: 813  ITVKWGDFTRRIGIDGTADAIKEAIKSAFGLRTRRAFWLEDEDEVVRSLDRDMPLGPYML 992
            I+VKWGD+TRRIGIDGTADAIKEAIKSAF LRT+R FWLEDED+++R+LDRDMPLG Y L
Sbjct: 240  ISVKWGDYTRRIGIDGTADAIKEAIKSAFRLRTKRGFWLEDEDQIIRTLDRDMPLGSYSL 299

Query: 993  HLDE--------------GMTIKVCIFDDSDRMPFQTEEKTLYTEDDFRDFLAHRGWTGL 1130
            HLDE              G+ IKVC +D+S+ +P  TEEKT YTE+DFRDFL  RGW+ L
Sbjct: 300  HLDEVMSEVLNVRALLFSGIGIKVCHYDESEHIPVHTEEKTFYTEEDFRDFLTRRGWSSL 359

Query: 1131 REMNDFRSVDSLNDLRPGAIYQGV 1202
            RE+N +R++D+++DLRP ++Y+G+
Sbjct: 360  RELNGYRNIDNMDDLRPDSLYRGM 383


>ref|XP_004159556.1| PREDICTED: trihelix transcription factor GT-1-like [Cucumis sativus]
          Length = 382

 Score =  484 bits (1245), Expect = e-134
 Identities = 235/379 (62%), Positives = 288/379 (75%), Gaps = 12/379 (3%)
 Frame = +3

Query: 102  MYLSERRGEMMIELIENGAHHQHHHQ------------QMILGESSGSDHEIRAPKKRAE 245
            +Y  E   +M+IE+  NG HH   HQ            QM+LG+SSG DHE++APKKRAE
Sbjct: 12   IYKEEGSRDMLIEVASNGDHHIQPHQPQPQPQQTHQQHQMMLGDSSGEDHEVKAPKKRAE 71

Query: 246  TWVQEETRSLINFRREVDGLFNTSKSNKHLWEQISCKMRDKGFDRSPTMCTDKWRNLLKE 425
            TWVQ+ETRSLI  RRE+DGLFNTSKSNKHLWEQIS KMR++GFDRSPTMCTDKWRNLLKE
Sbjct: 72   TWVQDETRSLIALRREMDGLFNTSKSNKHLWEQISTKMRERGFDRSPTMCTDKWRNLLKE 131

Query: 426  FKKARQQVRGSGSAAKMSYYKXXXXXXXXXSKNAPYKSSTTAAVEAGSTKVDAYVQFDSS 605
            FKKA+   RGSGSA KMS YK         SK+  YKS T         K+D+Y+QF S 
Sbjct: 132  FKKAKHHDRGSGSA-KMSCYKEIEEILKERSKSTQYKSPTPP-------KIDSYMQF-SD 182

Query: 606  KGSEDSTIPFGPVEAVGRSTINLERRIHNDGHSLXXXXXXXXXXXXLPPWNWRSTSGNGG 785
            KG ED+ + FGPVEA GR ++NLER++ +DGH L            +PPWNWR   GNGG
Sbjct: 183  KGIEDNGLSFGPVEAGGRPSLNLERQLDHDGHPLAITAADAVAATGIPPWNWREAPGNGG 242

Query: 786  ESHSYGGRVITVKWGDFTRRIGIDGTADAIKEAIKSAFGLRTRRAFWLEDEDEVVRSLDR 965
            ES ++GGRVI+VKWGD+TRRIG+DGTA+AIKEAIKSAFGLRT+RAFWLEDED+VVRSLDR
Sbjct: 243  ESQAFGGRVISVKWGDYTRRIGVDGTAEAIKEAIKSAFGLRTKRAFWLEDEDQVVRSLDR 302

Query: 966  DMPLGPYMLHLDEGMTIKVCIFDDSDRMPFQTEEKTLYTEDDFRDFLAHRGWTGLREMND 1145
            DMPLG Y LHLDEG+ +K+C++D+S+ +P  +E+K  Y E+D+RDFLA RGWT LRE + 
Sbjct: 303  DMPLGNYTLHLDEGVAVKICLYDESNHLPVHSEDKVFYIEEDYRDFLARRGWTSLREFDG 362

Query: 1146 FRSVDSLNDLRPGAIYQGV 1202
            +R++D+++DLRPGAIY+GV
Sbjct: 363  YRNIDNMDDLRPGAIYRGV 381


>ref|XP_002514968.1| transcription factor, putative [Ricinus communis]
            gi|223546019|gb|EEF47522.1| transcription factor,
            putative [Ricinus communis]
          Length = 398

 Score =  482 bits (1241), Expect = e-134
 Identities = 240/382 (62%), Positives = 287/382 (75%), Gaps = 22/382 (5%)
 Frame = +3

Query: 120  RGEMMIELIENGA----HHQHHH-----------------QQMILGESSGSD-HEIRAPK 233
            R  M+IE++        H QHHH                 QQMILGESSG D HE++APK
Sbjct: 23   RENMIIEVVSTNGELPPHQQHHHIHNPHNPQPQQQQQQQQQQMILGESSGEDTHEVKAPK 82

Query: 234  KRAETWVQEETRSLINFRREVDGLFNTSKSNKHLWEQISCKMRDKGFDRSPTMCTDKWRN 413
            KRAETWVQ+ETRSLI  RRE+DGLFNTSKSNKHLWE IS KMR+KGFDRSPTMCTDKWRN
Sbjct: 83   KRAETWVQDETRSLIGLRREMDGLFNTSKSNKHLWESISSKMREKGFDRSPTMCTDKWRN 142

Query: 414  LLKEFKKARQQVRGSGSAAKMSYYKXXXXXXXXXSKNAPYKSSTTAAVEAGSTKVDAYVQ 593
            LLKEFKKAR Q RGSGSA KMSYYK         SKNA YKS T       ++KVD+++Q
Sbjct: 143  LLKEFKKARHQERGSGSA-KMSYYKEIDEILRERSKNAQYKSPTP------TSKVDSFMQ 195

Query: 594  FDSSKGSEDSTIPFGPVEAVGRSTINLERRIHNDGHSLXXXXXXXXXXXXLPPWNWRSTS 773
            F + KG +D++I FGPVEA GR T+NLERR+ +DGH L            +PPWNWR T 
Sbjct: 196  F-ADKGFDDTSISFGPVEASGRPTLNLERRLDHDGHPLAITAADAVAASGVPPWNWRETP 254

Query: 774  GNGGESHSYGGRVITVKWGDFTRRIGIDGTADAIKEAIKSAFGLRTRRAFWLEDEDEVVR 953
            G+G E  S+GGRVITVK+GD+TRRIGIDGTADAI+EA+KSAF LRT+RAFWLEDED+++R
Sbjct: 255  GSGAEGQSFGGRVITVKYGDYTRRIGIDGTADAIREAVKSAFRLRTKRAFWLEDEDQIIR 314

Query: 954  SLDRDMPLGPYMLHLDEGMTIKVCIFDDSDRMPFQTEEKTLYTEDDFRDFLAHRGWTGLR 1133
            SLDRDMP+G Y LHLDEG+ IKVC++D+SD +P  TEEK  YTEDD+R+FL  RGWT LR
Sbjct: 315  SLDRDMPVGNYTLHLDEGLAIKVCLYDESDHIPVHTEEKVFYTEDDYREFLVRRGWTCLR 374

Query: 1134 EMNDFRSVDSLNDLRPGAIYQG 1199
            E + +R++D+++DLRPG IY+G
Sbjct: 375  EFDGYRNIDNMDDLRPGVIYRG 396


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