BLASTX nr result

ID: Coptis21_contig00018058 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018058
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003600924.1| Clathrin heavy chain [Medicago truncatula] g...    77   1e-12
ref|XP_004138417.1| PREDICTED: clathrin heavy chain 1-like [Cucu...    77   2e-12
gb|AGC82051.1| clathrin heavy chain 1 [Zea mays]                       77   2e-12
gb|AAG50828.1|AC074395_2 clathrin heavy chain, putative [Arabido...    77   2e-12
ref|NP_001236999.1| clathrin heavy chain [Glycine max] gi|133586...    77   2e-12

>ref|XP_003600924.1| Clathrin heavy chain [Medicago truncatula]
           gi|355489972|gb|AES71175.1| Clathrin heavy chain
           [Medicago truncatula]
          Length = 1742

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 40/52 (76%), Positives = 45/52 (86%)
 Frame = +2

Query: 2   LECSEELSNLVKTVDNDLAQEIYIKARDTAKVVAASADSREFEKILILSKKV 157
           LECSEEL +LVKTVDNDLA +IYIKAR T KVVAA A+ REF+KILI SK+V
Sbjct: 471 LECSEELGDLVKTVDNDLALKIYIKARATPKVVAAFAEKREFDKILIYSKQV 522


>ref|XP_004138417.1| PREDICTED: clathrin heavy chain 1-like [Cucumis sativus]
           gi|449499116|ref|XP_004160726.1| PREDICTED: clathrin
           heavy chain 1-like [Cucumis sativus]
          Length = 1707

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 40/52 (76%), Positives = 45/52 (86%)
 Frame = +2

Query: 2   LECSEELSNLVKTVDNDLAQEIYIKARDTAKVVAASADSREFEKILILSKKV 157
           LECSEEL +LVKTVDNDLA +IYIKAR T KVVAA A+ REF+KILI SK+V
Sbjct: 470 LECSEELGDLVKTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQV 521


>gb|AGC82051.1| clathrin heavy chain 1 [Zea mays]
          Length = 1693

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 40/52 (76%), Positives = 45/52 (86%)
 Frame = +2

Query: 2   LECSEELSNLVKTVDNDLAQEIYIKARDTAKVVAASADSREFEKILILSKKV 157
           LECSEEL +LVKTVDNDLA +IYIKAR T KVVAA A+ REF+KILI SK+V
Sbjct: 461 LECSEELGDLVKTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQV 512


>gb|AAG50828.1|AC074395_2 clathrin heavy chain, putative [Arabidopsis thaliana]
          Length = 1516

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 40/52 (76%), Positives = 45/52 (86%)
 Frame = +2

Query: 2   LECSEELSNLVKTVDNDLAQEIYIKARDTAKVVAASADSREFEKILILSKKV 157
           LECSEEL +LVKTVDNDLA +IYIKAR T KVVAA A+ REF+KILI SK+V
Sbjct: 280 LECSEELGDLVKTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQV 331


>ref|NP_001236999.1| clathrin heavy chain [Glycine max] gi|1335862|gb|AAC49294.1|
           clathrin heavy chain [Glycine max]
          Length = 1700

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 40/52 (76%), Positives = 45/52 (86%)
 Frame = +2

Query: 2   LECSEELSNLVKTVDNDLAQEIYIKARDTAKVVAASADSREFEKILILSKKV 157
           LECSEEL +LVKTVDNDLA +IYIKAR T KVVAA A+ REF+KILI SK+V
Sbjct: 469 LECSEELGDLVKTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQV 520


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