BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018042
         (880 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274151.1| PREDICTED: pentatricopeptide repeat-containi...   196   5e-48
ref|XP_003520114.1| PREDICTED: pentatricopeptide repeat-containi...   192   7e-47
ref|XP_002512079.1| pentatricopeptide repeat-containing protein,...   191   2e-46
ref|XP_002311339.1| predicted protein [Populus trichocarpa] gi|2...   187   4e-45
ref|XP_003614163.1| Pentatricopeptide repeat-containing protein ...   182   9e-44

>ref|XP_002274151.1| PREDICTED: pentatricopeptide repeat-containing protein At1g69290
           [Vitis vinifera]
          Length = 655

 Score =  196 bits (499), Expect = 5e-48
 Identities = 91/109 (83%), Positives = 103/109 (94%)
 Frame = +2

Query: 2   YVMAEKYFSVLILWTEVRKQVSVDSEKGLKLDHNLVDAFLYALIKGGFFDAVMQVVEKTQ 181
           Y  AEKYFSVL+LW EV++++S+D EKG+K DHNLVDAFLYAL+KGGFFDAVMQVVEK+Q
Sbjct: 547 YASAEKYFSVLMLWNEVKRRISIDGEKGVKFDHNLVDAFLYALVKGGFFDAVMQVVEKSQ 606

Query: 182 EMKIFVDKWRYKQAFMETHKKLKVAKLRKRNFRKMEALVAFKNWAGLSA 328
           EMKIFVDKWRYKQAFME HKKLKVAK+RKRNFRKMEAL+AFKNWAGL+A
Sbjct: 607 EMKIFVDKWRYKQAFMEVHKKLKVAKVRKRNFRKMEALIAFKNWAGLNA 655


>ref|XP_003520114.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g69290-like [Glycine max]
          Length = 624

 Score =  192 bits (489), Expect = 7e-47
 Identities = 88/109 (80%), Positives = 103/109 (94%)
 Frame = +2

Query: 2   YVMAEKYFSVLILWTEVRKQVSVDSEKGLKLDHNLVDAFLYALIKGGFFDAVMQVVEKTQ 181
           YV+AEKYF VL+LW EV++++S+D +KG+K DHNLVDAFLYA++KGGFFDAVMQVVEK  
Sbjct: 516 YVLAEKYFLVLMLWNEVKRKLSLDGQKGIKFDHNLVDAFLYAMVKGGFFDAVMQVVEKAY 575

Query: 182 EMKIFVDKWRYKQAFMETHKKLKVAKLRKRNFRKMEALVAFKNWAGLSA 328
           EM++FVDKWRYKQAFMETHKKLKVAKLRKRNFRKMEAL+AFKNWAGL+A
Sbjct: 576 EMRVFVDKWRYKQAFMETHKKLKVAKLRKRNFRKMEALIAFKNWAGLNA 624


>ref|XP_002512079.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549259|gb|EEF50748.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 650

 Score =  191 bits (485), Expect = 2e-46
 Identities = 90/109 (82%), Positives = 102/109 (93%)
 Frame = +2

Query: 2   YVMAEKYFSVLILWTEVRKQVSVDSEKGLKLDHNLVDAFLYALIKGGFFDAVMQVVEKTQ 181
           YV AEKYFSVL+LW+E++++VS D EK  K D NLVDAFLYAL+KGGFFDAVMQVVEK+Q
Sbjct: 542 YVTAEKYFSVLMLWSEIKRRVSNDKEKSFKFDQNLVDAFLYALVKGGFFDAVMQVVEKSQ 601

Query: 182 EMKIFVDKWRYKQAFMETHKKLKVAKLRKRNFRKMEALVAFKNWAGLSA 328
           EMKIFVDKW+YKQAFMETHKKLKV+KLRKRNFRKMEAL+AFKNWAGL+A
Sbjct: 602 EMKIFVDKWKYKQAFMETHKKLKVSKLRKRNFRKMEALIAFKNWAGLNA 650


>ref|XP_002311339.1| predicted protein [Populus trichocarpa] gi|222851159|gb|EEE88706.1|
           predicted protein [Populus trichocarpa]
          Length = 654

 Score =  187 bits (474), Expect = 4e-45
 Identities = 87/108 (80%), Positives = 100/108 (92%)
 Frame = +2

Query: 2   YVMAEKYFSVLILWTEVRKQVSVDSEKGLKLDHNLVDAFLYALIKGGFFDAVMQVVEKTQ 181
           YV AEKYF VL+LW EV+++VS D EKG+K D +LVDAFLYA++KGGFFDAVMQVVEK+Q
Sbjct: 546 YVTAEKYFGVLMLWNEVKRKVSPDKEKGIKFDQSLVDAFLYAMVKGGFFDAVMQVVEKSQ 605

Query: 182 EMKIFVDKWRYKQAFMETHKKLKVAKLRKRNFRKMEALVAFKNWAGLS 325
           EMKIFVDKWRYKQAFME+HKKLKV+KLRKRNFRKMEAL+AFKNW GL+
Sbjct: 606 EMKIFVDKWRYKQAFMESHKKLKVSKLRKRNFRKMEALIAFKNWVGLN 653


>ref|XP_003614163.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355515498|gb|AES97121.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 660

 Score =  182 bits (462), Expect = 9e-44
 Identities = 84/109 (77%), Positives = 100/109 (91%)
 Frame = +2

Query: 2   YVMAEKYFSVLILWTEVRKQVSVDSEKGLKLDHNLVDAFLYALIKGGFFDAVMQVVEKTQ 181
           YV AEKYF V++LW EV+++++ D  KG+K D NLVDAFLYA++KGGFFDAVMQVVEK++
Sbjct: 552 YVSAEKYFDVMMLWNEVKRKLAGDGPKGIKFDQNLVDAFLYAMVKGGFFDAVMQVVEKSK 611

Query: 182 EMKIFVDKWRYKQAFMETHKKLKVAKLRKRNFRKMEALVAFKNWAGLSA 328
           EMKIFVDKWRYKQAFMETHKKLKVA+LRK+N RKMEAL+AFKNWAGL+A
Sbjct: 612 EMKIFVDKWRYKQAFMETHKKLKVARLRKKNVRKMEALIAFKNWAGLNA 660