BLASTX nr result

ID: Coptis21_contig00018038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018038
         (1062 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276519.1| PREDICTED: TPR repeat-containing thioredoxin...   257   3e-66
emb|CAN62839.1| hypothetical protein VITISV_003392 [Vitis vinifera]   257   3e-66
emb|CBI21978.3| unnamed protein product [Vitis vinifera]              234   3e-59
ref|XP_004171005.1| PREDICTED: LOW QUALITY PROTEIN: TPR repeat-c...   231   2e-58
ref|XP_004146029.1| PREDICTED: TPR repeat-containing thioredoxin...   231   2e-58

>ref|XP_002276519.1| PREDICTED: TPR repeat-containing thioredoxin TTL1-like [Vitis
           vinifera]
          Length = 710

 Score =  257 bits (657), Expect = 3e-66
 Identities = 156/325 (48%), Positives = 184/325 (56%), Gaps = 31/325 (9%)
 Frame = -2

Query: 884 DTINDRLNGVVLSCEDDDNKPDFKQLDLGSPVSPLRTRXXXXXXXXXXXXXXXXXXXXXX 705
           D+++DR+    LSCE   NKPDF++LDLGSPVSPL TR                      
Sbjct: 4   DSLSDRVRDT-LSCES--NKPDFRELDLGSPVSPLMTRGSGGGGGGSGGGGGGPAAMSSS 60

Query: 704 XTQ-----------QVVKRSD----YHXXXXXXXXXXXXXXXXXGRSAPVSRNFKPGHRR 570
            +            Q+VKR D     +                  RS   +RN +PGHRR
Sbjct: 61  SSSSGSVSGKTGGTQLVKRPDGSLNNYSGELSASSETSPYASETLRSVAGTRNSRPGHRR 120

Query: 569 SNSTGAPLIYSGSGSVTS----------------PNVNALPTGNICPSGKVVKTGMAQRC 438
           S+S G PLIYSG+  V+S                PN N LP+GNICPSGK++K GM  R 
Sbjct: 121 SSSAGPPLIYSGASFVSSSNGGCSGGGASSISSNPNANVLPSGNICPSGKILKAGMPCRS 180

Query: 437 SVRSDVLGSGMGNYXXXXXXXXXXXXXXXXXXXSNACEVSGGNCLGNVHFGGETVTVKRG 258
           S RSDVLGSG G+Y                        ++  N  GN+ F GE+V VKR 
Sbjct: 181 SGRSDVLGSGTGHYGHGSIMRGGAKLSSPR-------SIADVNMTGNIQFAGESVMVKRA 233

Query: 257 MATSDPEEVKKAGNEQYKRGHFAEALCLYDRAIALSPDNAAYRSNRAAALTGLGRFMEAV 78
           M +SDPEEVKKAGNE Y+RG F EAL LYDRAI+LSPDNAAYRSNRAAALT LG+  EAV
Sbjct: 234 MGSSDPEEVKKAGNELYRRGSFTEALSLYDRAISLSPDNAAYRSNRAAALTALGKLAEAV 293

Query: 77  NECEEAVRLDPAYGRAHQRLSSLHL 3
            ECEEAVRLDP YGRAHQRL+SL+L
Sbjct: 294 KECEEAVRLDPGYGRAHQRLASLYL 318


>emb|CAN62839.1| hypothetical protein VITISV_003392 [Vitis vinifera]
          Length = 815

 Score =  257 bits (657), Expect = 3e-66
 Identities = 156/325 (48%), Positives = 184/325 (56%), Gaps = 31/325 (9%)
 Frame = -2

Query: 884 DTINDRLNGVVLSCEDDDNKPDFKQLDLGSPVSPLRTRXXXXXXXXXXXXXXXXXXXXXX 705
           D+++DR+    LSCE   NKPDF++LDLGSPVSPL TR                      
Sbjct: 14  DSLSDRVRDT-LSCES--NKPDFRELDLGSPVSPLMTRGSGGGGGGSGGGGGGPAAMSSS 70

Query: 704 XTQ-----------QVVKRSD----YHXXXXXXXXXXXXXXXXXGRSAPVSRNFKPGHRR 570
            +            Q+VKR D     +                  RS   +RN +PGHRR
Sbjct: 71  SSSSGSVSGKTGGTQLVKRPDGSLNNYSGELSASSETSPYASETLRSVAGTRNSRPGHRR 130

Query: 569 SNSTGAPLIYSGSGSVTS----------------PNVNALPTGNICPSGKVVKTGMAQRC 438
           S+S G PLIYSG+  V+S                PN N LP+GNICPSGK++K GM  R 
Sbjct: 131 SSSAGPPLIYSGASFVSSSNGGCSGGGASXISSNPNANVLPSGNICPSGKILKAGMPCRS 190

Query: 437 SVRSDVLGSGMGNYXXXXXXXXXXXXXXXXXXXSNACEVSGGNCLGNVHFGGETVTVKRG 258
           S RSDVLGSG G+Y                        ++  N  GN+ F GE+V VKR 
Sbjct: 191 SGRSDVLGSGTGHYGHGSIMRGGAKLSSPR-------SIADVNMTGNIQFAGESVMVKRA 243

Query: 257 MATSDPEEVKKAGNEQYKRGHFAEALCLYDRAIALSPDNAAYRSNRAAALTGLGRFMEAV 78
           M +SDPEEVKKAGNE Y+RG F EAL LYDRAI+LSPDNAAYRSNRAAALT LG+  EAV
Sbjct: 244 MGSSDPEEVKKAGNELYRRGSFTEALSLYDRAISLSPDNAAYRSNRAAALTALGKLAEAV 303

Query: 77  NECEEAVRLDPAYGRAHQRLSSLHL 3
            ECEEAVRLDP YGRAHQRL+SL+L
Sbjct: 304 KECEEAVRLDPGYGRAHQRLASLYL 328


>emb|CBI21978.3| unnamed protein product [Vitis vinifera]
          Length = 675

 Score =  234 bits (597), Expect = 3e-59
 Identities = 146/314 (46%), Positives = 169/314 (53%), Gaps = 20/314 (6%)
 Frame = -2

Query: 884 DTINDRLNGVVLSCEDDDNKPDFKQLDLGSPVSPLRTRXXXXXXXXXXXXXXXXXXXXXX 705
           D+++DR+    LSCE   NKPDF++LDLGSPVSP                          
Sbjct: 14  DSLSDRVRDT-LSCES--NKPDFRELDLGSPVSP-----------------SSGSVSGKT 53

Query: 704 XTQQVVKRSD----YHXXXXXXXXXXXXXXXXXGRSAPVSRNFKPGHRRSNSTGAPLIYS 537
              Q+VKR D     +                  RS   +RN +PGHRRS+S G PLIYS
Sbjct: 54  GGTQLVKRPDGSLNNYSGELSASSETSPYASETLRSVAGTRNSRPGHRRSSSAGPPLIYS 113

Query: 536 GSGSVTS----------------PNVNALPTGNICPSGKVVKTGMAQRCSVRSDVLGSGM 405
           G+  V+S                PN N LP+GNICPSGK++K GM  R S RSDVLGSG 
Sbjct: 114 GASFVSSSNGGCSGGGASSISSNPNANVLPSGNICPSGKILKAGMPCRSSGRSDVLGSGT 173

Query: 404 GNYXXXXXXXXXXXXXXXXXXXSNACEVSGGNCLGNVHFGGETVTVKRGMATSDPEEVKK 225
           G+Y                          G    G            R M +SDPEEVKK
Sbjct: 174 GHYGH------------------------GSIMRGGAKLSSPRSIADRAMGSSDPEEVKK 209

Query: 224 AGNEQYKRGHFAEALCLYDRAIALSPDNAAYRSNRAAALTGLGRFMEAVNECEEAVRLDP 45
           AGNE Y+RG F EAL LYDRAI+LSPDNAAYRSNRAAALT LG+  EAV ECEEAVRLDP
Sbjct: 210 AGNELYRRGSFTEALSLYDRAISLSPDNAAYRSNRAAALTALGKLAEAVKECEEAVRLDP 269

Query: 44  AYGRAHQRLSSLHL 3
            YGRAHQRL+SL+L
Sbjct: 270 GYGRAHQRLASLYL 283


>ref|XP_004171005.1| PREDICTED: LOW QUALITY PROTEIN: TPR repeat-containing thioredoxin
           TTL1-like [Cucumis sativus]
          Length = 698

 Score =  231 bits (590), Expect = 2e-58
 Identities = 156/310 (50%), Positives = 181/310 (58%), Gaps = 10/310 (3%)
 Frame = -2

Query: 908 PMSDTELDDTINDRLNGVVLSCEDDDNKPDFKQLDLGSPVSPLRTRXXXXXXXXXXXXXX 729
           P+SD   D  ++DR    V SCE   NKPDF++LDLGSPVSPLRTR              
Sbjct: 7   PISDLRFDH-LSDRFRDSV-SCEV--NKPDFRELDLGSPVSPLRTRHQTGGGPAASSSSS 62

Query: 728 XXXXXXXXXTQQ-VVKRSDY----HXXXXXXXXXXXXXXXXXGRSAPVSRNFKPGHRRSN 564
                        V KRSD     H                  RS    +NFK GH RS+
Sbjct: 63  SSGSVSGRNGPNPVAKRSDSGPNNHSGELSGSSESSPTAAESLRSIGTPKNFKSGHNRSD 122

Query: 563 S-TGAPLIYSGSG--SVTSPNVNALPTGNICPSGKVVKTGM-AQRCSVRSDVLGSGMGNY 396
           S +  PLIYSG    SVTSP+ N LPTGNICPSG+++K  M +   S R+DVLGSG GNY
Sbjct: 123 SASNHPLIYSGQSQSSVTSPS-NVLPTGNICPSGRILKPSMPSTNRSSRTDVLGSGSGNY 181

Query: 395 XXXXXXXXXXXXXXXXXXXS-NACEVSGGNCLGNVHFGGETVTVKRGMATSDPEEVKKAG 219
                                NAC   GG  +G    GG+++  KR   + DPEE+K+AG
Sbjct: 182 GHGSIMRGLGGVKTGAVESISNACSRVGG--VG----GGDSL--KRAKQSGDPEELKRAG 233

Query: 218 NEQYKRGHFAEALCLYDRAIALSPDNAAYRSNRAAALTGLGRFMEAVNECEEAVRLDPAY 39
           NEQYK+GHFAEAL LYDRAIA+SP NAAYRSNRAAALTGLGR  EAV+ECEEAVRLDP Y
Sbjct: 234 NEQYKKGHFAEALSLYDRAIAISPANAAYRSNRAAALTGLGRLGEAVSECEEAVRLDPNY 293

Query: 38  GRAHQRLSSL 9
            RAHQRL+SL
Sbjct: 294 IRAHQRLASL 303


>ref|XP_004146029.1| PREDICTED: TPR repeat-containing thioredoxin TTL1-like [Cucumis
           sativus]
          Length = 698

 Score =  231 bits (590), Expect = 2e-58
 Identities = 156/310 (50%), Positives = 181/310 (58%), Gaps = 10/310 (3%)
 Frame = -2

Query: 908 PMSDTELDDTINDRLNGVVLSCEDDDNKPDFKQLDLGSPVSPLRTRXXXXXXXXXXXXXX 729
           P+SD   D  ++DR    V SCE   NKPDF++LDLGSPVSPLRTR              
Sbjct: 7   PISDLRFDH-LSDRFRDSV-SCEV--NKPDFRELDLGSPVSPLRTRHQTGGGPAASSSSS 62

Query: 728 XXXXXXXXXTQQ-VVKRSDY----HXXXXXXXXXXXXXXXXXGRSAPVSRNFKPGHRRSN 564
                        V KRSD     H                  RS    +NFK GH RS+
Sbjct: 63  SSGSVSGRNGPNPVAKRSDSGPNNHSGELSGSSESSPTAAESLRSIGTPKNFKSGHNRSD 122

Query: 563 S-TGAPLIYSGSG--SVTSPNVNALPTGNICPSGKVVKTGM-AQRCSVRSDVLGSGMGNY 396
           S +  PLIYSG    SVTSP+ N LPTGNICPSG+++K  M +   S R+DVLGSG GNY
Sbjct: 123 SASNHPLIYSGQSQSSVTSPS-NVLPTGNICPSGRILKPSMPSTNRSSRTDVLGSGSGNY 181

Query: 395 XXXXXXXXXXXXXXXXXXXS-NACEVSGGNCLGNVHFGGETVTVKRGMATSDPEEVKKAG 219
                                NAC   GG  +G    GG+++  KR   + DPEE+K+AG
Sbjct: 182 GHGSIMRGLGGVKTGAVESISNACSRVGG--VG----GGDSL--KRAKQSGDPEELKRAG 233

Query: 218 NEQYKRGHFAEALCLYDRAIALSPDNAAYRSNRAAALTGLGRFMEAVNECEEAVRLDPAY 39
           NEQYK+GHFAEAL LYDRAIA+SP NAAYRSNRAAALTGLGR  EAV+ECEEAVRLDP Y
Sbjct: 234 NEQYKKGHFAEALSLYDRAIAISPANAAYRSNRAAALTGLGRLGEAVSECEEAVRLDPNY 293

Query: 38  GRAHQRLSSL 9
            RAHQRL+SL
Sbjct: 294 IRAHQRLASL 303