BLASTX nr result

ID: Coptis21_contig00018035 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018035
         (768 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28477.3| unnamed protein product [Vitis vinifera]              194   2e-47
ref|XP_002298692.1| predicted protein [Populus trichocarpa] gi|2...   182   5e-44
ref|XP_002524597.1| conserved hypothetical protein [Ricinus comm...   172   5e-41
dbj|BAA32823.1| 184 [Daucus carota]                                   165   9e-39
dbj|BAE71230.1| hypothetical protein [Trifolium pratense]             165   1e-38

>emb|CBI28477.3| unnamed protein product [Vitis vinifera]
          Length = 1013

 Score =  194 bits (493), Expect = 2e-47
 Identities = 105/244 (43%), Positives = 154/244 (63%), Gaps = 5/244 (2%)
 Frame = +3

Query: 51   YNKVITKQHEVGALDEKVKNLMNSVFADCKIKGGQNPDQCIMLVDDYLRKRARCRLTQKE 230
            Y+KV   + E+ A D K+KNL  S+ + CK KG  +  + I+LV D+L +R  CR  +++
Sbjct: 735  YDKVSAMRQEIEASDRKIKNLTKSLQSSCKTKGKPSCAETILLVTDHLNRRTCCRFIRQD 794

Query: 231  FQLWEVDRLKREDGHHNLSLNYCDLLVQSFTISRT--SKLVALNKLNNVKIMKSFPNVNA 404
             Q WEVD  +  +  H+  L Y + + Q F+++ +  S ++  NKLN+ KI+K+FPN++A
Sbjct: 795  LQFWEVDEFENRNYPHSFVLCYRNFMFQRFSLNASPLSSIIISNKLNDTKIVKNFPNMDA 854

Query: 405  YTALGFVFNDEAARSFVNSKSLAVETQMTRFLLHNLMVVVEEVQQSCIEIRNLAQSCFRS 584
             TA  FV + E  +  V  +SLA ETQMT  LL NL+ VVEEVQ + +E+RNL+++ F S
Sbjct: 855  CTAFAFVIDAETTKKHVGPRSLAQETQMTSSLLSNLLDVVEEVQLARLELRNLSKTSFHS 914

Query: 585  PCVGQLELELHFVDFKTGSKVILTLDVTSLNRGVYPLQVHP---RISVNPTHESLSTDIE 755
            P VGQL+L L F+D K+G KV L LDVT L  GVYP ++ P   + +   T  SL+  + 
Sbjct: 915  PSVGQLDLHLCFIDLKSGRKVTLILDVTCLKCGVYPSELLPSQIQAAATGTQNSLAPSLS 974

Query: 756  AAIR 767
            A IR
Sbjct: 975  AEIR 978


>ref|XP_002298692.1| predicted protein [Populus trichocarpa] gi|222845950|gb|EEE83497.1|
           predicted protein [Populus trichocarpa]
          Length = 206

 Score =  182 bits (463), Expect = 5e-44
 Identities = 97/205 (47%), Positives = 134/205 (65%), Gaps = 2/205 (0%)
 Frame = +3

Query: 72  QHEVGALDEKVKNLMNSVFADCKIKGGQNPDQCIMLVDDYLRKRARCRLTQKEFQLWEVD 251
           +HE  AL+  +K+L  S  + CK++G Q+ D+ I LV+D+L++R  CR   K+ QLWEV+
Sbjct: 2   RHEAEALNRNIKSLTKSFHSYCKMRGEQSCDETIALVNDHLKRRTSCRFICKDLQLWEVE 61

Query: 252 RLKREDGHHNLSLNYCDLLVQSFTISR--TSKLVALNKLNNVKIMKSFPNVNAYTALGFV 425
            L+  +G  N  LNY   + Q FTI+   T  +   N+LN+  IMK FPN++A  A  + 
Sbjct: 62  DLRSRNGQLNFVLNYHGFISQRFTINAVPTRSISIANQLNHTTIMKIFPNMDACVAFSYA 121

Query: 426 FNDEAARSFVNSKSLAVETQMTRFLLHNLMVVVEEVQQSCIEIRNLAQSCFRSPCVGQLE 605
            N E  + +  SK LA ETQ+T  LL NL+ V EEVQQ+ IEIRNL ++ F SP V +L+
Sbjct: 122 LNSETTKKYAGSKILAQETQVTSSLLRNLLDVTEEVQQAQIEIRNLVKTSFSSPSVEKLD 181

Query: 606 LELHFVDFKTGSKVILTLDVTSLNR 680
           L L FVDFKTG KV++TLD+T LNR
Sbjct: 182 LLLCFVDFKTGWKVVVTLDMTCLNR 206


>ref|XP_002524597.1| conserved hypothetical protein [Ricinus communis]
            gi|223536150|gb|EEF37805.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1277

 Score =  172 bits (437), Expect = 5e-41
 Identities = 93/221 (42%), Positives = 140/221 (63%), Gaps = 2/221 (0%)
 Frame = +3

Query: 21   DLSSTNADAYYNKVITKQHEVGALDEKVKNLMNSVFADCKIKGGQNPDQCIMLVDDYLRK 200
            DL S +  A   KV TK+HE+ ALD K+ NL     + CK+KG     + I++++D+L+K
Sbjct: 1057 DLGSKDEVAM-EKVSTKKHELEALDRKIMNLSKVFHSYCKMKGEPGCSETIVMLNDHLKK 1115

Query: 201  RARCRLTQKEFQLWEVDRLKREDGHHNLSLNYCDLLVQSFTISR--TSKLVALNKLNNVK 374
            +  CR   ++ QLWEVD     +G  N++LNY +L++Q F I+      +   NKL+++ 
Sbjct: 1116 KTSCRFIHEDLQLWEVDDFGNRNGTQNIALNYQNLVIQRFVINDGPIPSIFVSNKLDDLN 1175

Query: 375  IMKSFPNVNAYTALGFVFNDEAARSFVNSKSLAVETQMTRFLLHNLMVVVEEVQQSCIEI 554
            I K+FPN++A  A  FV N +  +  V SKS A ETQ+T  LLHNL+ VV EVQ + +E+
Sbjct: 1176 IAKNFPNMDACMAFAFVLNVKTTKKHVGSKSFAQETQITCSLLHNLLDVVGEVQLAQVEV 1235

Query: 555  RNLAQSCFRSPCVGQLELELHFVDFKTGSKVILTLDVTSLN 677
            R+L ++ F S    QL+L+L F+D  +G KV++TLD+T LN
Sbjct: 1236 RSLVRTSFHSSSGEQLDLQLFFIDPNSGMKVLMTLDITCLN 1276


>dbj|BAA32823.1| 184 [Daucus carota]
          Length = 774

 Score =  165 bits (418), Expect = 9e-39
 Identities = 88/229 (38%), Positives = 142/229 (62%), Gaps = 2/229 (0%)
 Frame = +3

Query: 54   NKVITKQHEVGALDEKVKNLMNSVFADCKIKGGQNPDQCIMLVDDYLRKRARCRLTQKEF 233
            +KV   +  +  L+  V  L  S    CKIK   +  + ++LV+DYL KRA CR ++ + 
Sbjct: 503  DKVTALEEVLEDLERSVTKLTESFLVRCKIKEKLDSAETVVLVNDYLTKRACCRFSRLDM 562

Query: 234  QLWEVDRLKREDGHHNLSLNYCDLLVQSFTIS-RTSKLVALN-KLNNVKIMKSFPNVNAY 407
            QLW++  L+  +GH N+ LNY   + Q   +  R   +V+++ +L+N+ I+K+ P V+A 
Sbjct: 563  QLWDIVHLENRNGHSNILLNYLGFITQRVNVVFRPVSIVSVSYELHNMNIIKNLPGVDAR 622

Query: 408  TALGFVFNDEAARSFVNSKSLAVETQMTRFLLHNLMVVVEEVQQSCIEIRNLAQSCFRSP 587
            TA  +VF+ E  R +V+S+S+A ETQ++  LL +++ VVEEVQ + +E+RNL Q  F S 
Sbjct: 623  TAFAYVFDAEPTRKYVSSRSVAEETQISSLLLGSMLDVVEEVQLARLELRNLIQCTFCSE 682

Query: 588  CVGQLELELHFVDFKTGSKVILTLDVTSLNRGVYPLQVHPRISVNPTHE 734
             V QL+L+L+F++ K+G +   T D++ L RGVYP ++ P I   P  E
Sbjct: 683  SVEQLDLQLYFLNLKSGKRATFTFDLSCLKRGVYPSEIIPSIMKAPADE 731


>dbj|BAE71230.1| hypothetical protein [Trifolium pratense]
          Length = 957

 Score =  165 bits (417), Expect = 1e-38
 Identities = 93/241 (38%), Positives = 141/241 (58%), Gaps = 5/241 (2%)
 Frame = +3

Query: 60   VITKQHEVGALDEKVKNLMNSVFADCKIKGGQNPDQCIMLVDDYLRKRARCRLTQKEFQL 239
            V+  + E+  LD+K K+L    ++ CK+KG Q+    +  V DYL KR   +L  +  +L
Sbjct: 686  VMETRQELENLDQKAKSLSEFFYSYCKMKGDQSYTNVVRSVRDYLEKRISYKLVFQNLKL 745

Query: 240  WEVDRLKREDGHHNLSLNYCDLLVQSFTISR-TSKLVALNKLNNVKIMKSFPNVNAYTAL 416
            W+V+  +R+D +H + LNY   ++Q FT++   S ++  N LN+V I K++PNV A++A 
Sbjct: 746  WDVEDFERKDDYHMIILNYRGYIIQRFTVNAGLSSIIVSNSLNDVNIGKTYPNVEAFSAF 805

Query: 417  GFVFNDEAARSFVNSKSLAVETQMTRFLLHNLMVVVEEVQQSCIEIRNLAQSCFRSPCVG 596
             F  N           S+A ETQ+T  LL NL+ VVEEVQ + +EIRNL Q+ F S  V 
Sbjct: 806  VFALNPHTTSKCTGRISMAQETQITGSLLSNLLDVVEEVQLARVEIRNLVQAKFNSHSVN 865

Query: 597  QLELELHFVDFKTGSKVILTLDVTSLNRGVYPLQVHPR----ISVNPTHESLSTDIEAAI 764
            QL+L+L F+DF  G KV + LD+T L  G YP +V P     ++ N   ++L + +   I
Sbjct: 866  QLDLQLSFIDFCGGKKVQVILDMTCLKCGAYPAEVLPSQIYGLAANGEQKALPSSLVDEI 925

Query: 765  R 767
            R
Sbjct: 926  R 926


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