BLASTX nr result

ID: Coptis21_contig00018023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018023
         (463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF91178.1|AF203700_1 ClpB [Phaseolus lunatus]                     193   1e-47
ref|XP_003603307.1| Chaperone protein clpB [Medicago truncatula]...   193   1e-47
ref|XP_003522428.1| PREDICTED: chaperone protein ClpB4, mitochon...   192   2e-47
ref|XP_002515440.1| chaperone clpb, putative [Ricinus communis] ...   189   3e-46
ref|XP_003570762.1| PREDICTED: chaperone protein ClpB3, mitochon...   188   4e-46

>gb|AAF91178.1|AF203700_1 ClpB [Phaseolus lunatus]
          Length = 977

 Score =  193 bits (490), Expect = 1e-47
 Identities = 97/139 (69%), Positives = 116/139 (83%), Gaps = 8/139 (5%)
 Frame = +3

Query: 66  SFARSYSTT--------ASKIDQSEYTEMAWEAVVGAVDAARLCKQQIVESEHLMKALLE 221
           SF RS+  T        +S++ Q+E+T+MAWE ++GAVDAAR+ KQQIVESEHLMKALLE
Sbjct: 69  SFTRSFHATNPSLRSAASSQVAQTEFTDMAWEGILGAVDAARISKQQIVESEHLMKALLE 128

Query: 222 QKDGLARRIFTKAGVDNSSVLQATDDFISRQIKVEGDTSGPRIGSHLQSLLDNARRLKKE 401
           QKDGLARR+FTK G+DN+SVLQATDDFI +Q KV GDT+GP IGSHL SLLDNAR+ KKE
Sbjct: 129 QKDGLARRVFTKTGLDNTSVLQATDDFIPKQPKVTGDTTGPVIGSHLSSLLDNARKYKKE 188

Query: 402 FGDDYLSVEHLVLAFTSDK 458
            GD+Y+SVEHL+LAF SDK
Sbjct: 189 MGDEYVSVEHLLLAFHSDK 207


>ref|XP_003603307.1| Chaperone protein clpB [Medicago truncatula]
           gi|355492355|gb|AES73558.1| Chaperone protein clpB
           [Medicago truncatula]
          Length = 980

 Score =  193 bits (490), Expect = 1e-47
 Identities = 100/139 (71%), Positives = 117/139 (84%), Gaps = 1/139 (0%)
 Frame = +3

Query: 48  FNAGVSSFARSY-STTASKIDQSEYTEMAWEAVVGAVDAARLCKQQIVESEHLMKALLEQ 224
           F     + A SY S  AS+I Q+E+TEMAWE V+GAVDAAR+ KQQIVESEHLMKALLEQ
Sbjct: 72  FTRNFHASAPSYRSAGASQISQTEFTEMAWEGVIGAVDAARVNKQQIVESEHLMKALLEQ 131

Query: 225 KDGLARRIFTKAGVDNSSVLQATDDFISRQIKVEGDTSGPRIGSHLQSLLDNARRLKKEF 404
           +DGLARRIFTKAG+DN+SVLQATD+FI++Q KV GDTSGP IGSH  S+LDN+ R KKE 
Sbjct: 132 RDGLARRIFTKAGLDNTSVLQATDNFIAQQPKVTGDTSGPVIGSHFSSILDNSHRHKKEM 191

Query: 405 GDDYLSVEHLVLAFTSDKR 461
           GD+Y+SVEHL+LAF SDKR
Sbjct: 192 GDEYVSVEHLLLAFHSDKR 210


>ref|XP_003522428.1| PREDICTED: chaperone protein ClpB4, mitochondrial-like [Glycine
           max]
          Length = 974

 Score =  192 bits (489), Expect = 2e-47
 Identities = 93/126 (73%), Positives = 113/126 (89%)
 Frame = +3

Query: 84  STTASKIDQSEYTEMAWEAVVGAVDAARLCKQQIVESEHLMKALLEQKDGLARRIFTKAG 263
           S  +S++ Q+++T+MAWE +VGAVDAAR+ KQQIVESEHLMKALLEQKDGLARRIFTKAG
Sbjct: 79  SAASSQVAQTDFTDMAWEGIVGAVDAARVSKQQIVESEHLMKALLEQKDGLARRIFTKAG 138

Query: 264 VDNSSVLQATDDFISRQIKVEGDTSGPRIGSHLQSLLDNARRLKKEFGDDYLSVEHLVLA 443
           +DN+SVLQAT+DFI++Q KV GDTSGP +GSH  SLLDN+R+ KKE GD+Y+SVEHL+LA
Sbjct: 139 LDNTSVLQATEDFIAKQPKVTGDTSGPVVGSHFSSLLDNSRKYKKEMGDEYVSVEHLLLA 198

Query: 444 FTSDKR 461
           F SDKR
Sbjct: 199 FHSDKR 204


>ref|XP_002515440.1| chaperone clpb, putative [Ricinus communis]
           gi|223545384|gb|EEF46889.1| chaperone clpb, putative
           [Ricinus communis]
          Length = 976

 Score =  189 bits (479), Expect = 3e-46
 Identities = 96/128 (75%), Positives = 110/128 (85%)
 Frame = +3

Query: 78  SYSTTASKIDQSEYTEMAWEAVVGAVDAARLCKQQIVESEHLMKALLEQKDGLARRIFTK 257
           S S T+S+ + SEYTEMAWE +VGAVDAAR  KQQ+VE+EHLMK+LLEQKDGLARRIFTK
Sbjct: 81  STSATSSQANPSEYTEMAWEGIVGAVDAARASKQQVVETEHLMKSLLEQKDGLARRIFTK 140

Query: 258 AGVDNSSVLQATDDFISRQIKVEGDTSGPRIGSHLQSLLDNARRLKKEFGDDYLSVEHLV 437
           AGVDN+SVLQATDDFIS Q KV GDTSGP +GS+L  LLDNAR+ KKE GDD++SVEH V
Sbjct: 141 AGVDNTSVLQATDDFISHQPKVVGDTSGPIMGSYLGVLLDNARKHKKEMGDDFVSVEHFV 200

Query: 438 LAFTSDKR 461
           L+F  DKR
Sbjct: 201 LSFHLDKR 208


>ref|XP_003570762.1| PREDICTED: chaperone protein ClpB3, mitochondrial-like
           [Brachypodium distachyon]
          Length = 987

 Score =  188 bits (477), Expect = 4e-46
 Identities = 93/133 (69%), Positives = 116/133 (87%)
 Frame = +3

Query: 63  SSFARSYSTTASKIDQSEYTEMAWEAVVGAVDAARLCKQQIVESEHLMKALLEQKDGLAR 242
           S ++ + ++++S+I   E+TEMAWE VVGAV+AARL KQQIVESEHLMKALLEQKDGLAR
Sbjct: 86  SRYSAAGTSSSSQISPGEFTEMAWEGVVGAVEAARLSKQQIVESEHLMKALLEQKDGLAR 145

Query: 243 RIFTKAGVDNSSVLQATDDFISRQIKVEGDTSGPRIGSHLQSLLDNARRLKKEFGDDYLS 422
           RIF+KAG+DN+SVLQATDDFISRQ KV GDTSGP +G +   +LDNAR+ KKE+GD+++S
Sbjct: 146 RIFSKAGLDNTSVLQATDDFISRQPKVGGDTSGPIVGPNFTLILDNARKHKKEYGDEFVS 205

Query: 423 VEHLVLAFTSDKR 461
           VEH++ AFTSDKR
Sbjct: 206 VEHILRAFTSDKR 218


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