BLASTX nr result

ID: Coptis21_contig00018021 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018021
         (579 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278117.2| PREDICTED: probable LRR receptor-like serine...   111   8e-23
emb|CBI19974.3| unnamed protein product [Vitis vinifera]              111   8e-23
ref|XP_002270207.2| PREDICTED: probable LRR receptor-like serine...   107   1e-21
ref|XP_003633276.1| PREDICTED: probable LRR receptor-like serine...   105   5e-21
emb|CAN69907.1| hypothetical protein VITISV_011744 [Vitis vinifera]   105   5e-21

>ref|XP_002278117.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At3g47570-like [Vitis vinifera]
          Length = 1067

 Score =  111 bits (278), Expect = 8e-23
 Identities = 52/101 (51%), Positives = 79/101 (78%), Gaps = 1/101 (0%)
 Frame = -3

Query: 577  VYSYGIVVLETFTRKRPTDDLFIEGQSLTQWVNTSFPEKVMDVIDADLLT-NEDRSMANR 401
            VYSYGI+++ETFTRK+PT ++F+ G SL QWV++SFP+ +M+V+DA+LL  +++ +  N 
Sbjct: 965  VYSYGIMLMETFTRKKPTHEMFVGGLSLRQWVDSSFPDLIMEVVDANLLARDQNNTNGNL 1024

Query: 400  RDCLSSIIDLALECSRHLPEERIKMNEVVVRLTKIQSEVLS 278
            + CL SI+ L L+CS   PE+R+ M EVVVRL+KI+ + +S
Sbjct: 1025 QTCLLSIMGLGLQCSLDSPEQRLDMKEVVVRLSKIRQQYIS 1065


>emb|CBI19974.3| unnamed protein product [Vitis vinifera]
          Length = 902

 Score =  111 bits (278), Expect = 8e-23
 Identities = 52/101 (51%), Positives = 79/101 (78%), Gaps = 1/101 (0%)
 Frame = -3

Query: 577  VYSYGIVVLETFTRKRPTDDLFIEGQSLTQWVNTSFPEKVMDVIDADLLT-NEDRSMANR 401
            VYSYGI+++ETFTRK+PT ++F+ G SL QWV++SFP+ +M+V+DA+LL  +++ +  N 
Sbjct: 800  VYSYGIMLMETFTRKKPTHEMFVGGLSLRQWVDSSFPDLIMEVVDANLLARDQNNTNGNL 859

Query: 400  RDCLSSIIDLALECSRHLPEERIKMNEVVVRLTKIQSEVLS 278
            + CL SI+ L L+CS   PE+R+ M EVVVRL+KI+ + +S
Sbjct: 860  QTCLLSIMGLGLQCSLDSPEQRLDMKEVVVRLSKIRQQYIS 900


>ref|XP_002270207.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At3g47570-like [Vitis vinifera]
          Length = 1118

 Score =  107 bits (267), Expect = 1e-21
 Identities = 56/104 (53%), Positives = 74/104 (71%), Gaps = 5/104 (4%)
 Frame = -3

Query: 577  VYSYGIVVLETFTRKRPTDDLFIEGQSLTQWVNTSFPEKVMDVIDADLLTNEDRS----- 413
            VYSYGI++LE FTRK+PTD++F E  SL QWVN S PE VM+V+D  LL+ ED       
Sbjct: 1010 VYSYGIMLLEIFTRKKPTDEMFSEELSLRQWVNASLPENVMEVVDGGLLSIEDGEAGGDV 1069

Query: 412  MANRRDCLSSIIDLALECSRHLPEERIKMNEVVVRLTKIQSEVL 281
            MA + + L +I++L LECSR LPEER  + +VVV+L KI+ + L
Sbjct: 1070 MATQSNLLLAIMELGLECSRDLPEERKGIKDVVVKLNKIKLQFL 1113


>ref|XP_003633276.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At3g47570-like [Vitis vinifera]
          Length = 1202

 Score =  105 bits (262), Expect = 5e-21
 Identities = 50/98 (51%), Positives = 73/98 (74%)
 Frame = -3

Query: 577  VYSYGIVVLETFTRKRPTDDLFIEGQSLTQWVNTSFPEKVMDVIDADLLTNEDRSMANRR 398
            +YSYGI+++ETF RK+PTD++F+E  +L  WV +S    +M+VIDA+LLT ED S A +R
Sbjct: 1100 IYSYGILLMETFVRKKPTDEMFVEELTLKSWVESS-TNNIMEVIDANLLTEEDESFALKR 1158

Query: 397  DCLSSIIDLALECSRHLPEERIKMNEVVVRLTKIQSEV 284
             C SSI+ LAL+C+   PE+RI   +VVVRL K+ +++
Sbjct: 1159 ACFSSIMTLALDCTVEPPEKRINTKDVVVRLKKLLNQI 1196


>emb|CAN69907.1| hypothetical protein VITISV_011744 [Vitis vinifera]
          Length = 1049

 Score =  105 bits (262), Expect = 5e-21
 Identities = 55/104 (52%), Positives = 73/104 (70%), Gaps = 5/104 (4%)
 Frame = -3

Query: 577  VYSYGIVVLETFTRKRPTDDLFIEGQSLTQWVNTSFPEKVMDVIDADLLTNEDRS----- 413
            VYSYGI++LE FTRK+PTD++F E  SL QWVN S PE  M+V+D  LL+ ED       
Sbjct: 941  VYSYGIMLLEIFTRKKPTDEMFSEELSLRQWVNASLPENXMEVVDGGLLSIEDGEAGGDV 1000

Query: 412  MANRRDCLSSIIDLALECSRHLPEERIKMNEVVVRLTKIQSEVL 281
            MA + + L +I++L LECSR LPEER  + +VVV+L KI+ + L
Sbjct: 1001 MATQSNLLLAIMELGLECSRDLPEERKGIKDVVVKLNKIKLQFL 1044


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