BLASTX nr result

ID: Coptis21_contig00018016 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018016
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631190.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor...   117   1e-24
emb|CBI27088.3| unnamed protein product [Vitis vinifera]              117   1e-24
emb|CAN62390.1| hypothetical protein VITISV_039480 [Vitis vinifera]   113   2e-23
ref|XP_002314895.1| white-brown-complex ABC transporter family [...    82   4e-14
ref|XP_003520157.1| PREDICTED: ABC transporter G family member 2...    80   2e-13

>ref|XP_003631190.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter G family member
           21-like [Vitis vinifera]
          Length = 677

 Score =  117 bits (293), Expect = 1e-24
 Identities = 62/111 (55%), Positives = 77/111 (69%), Gaps = 3/111 (2%)
 Frame = -2

Query: 324 MMPSKEGAFSGRSARLPVVNRLENTLVHA-EPISNTTSFSNDQIPNKEITSRS--SVLSE 154
           M P +E   +G  A +   NR+EN  +HA EP SN +    DQ P+ + T+R   S+L E
Sbjct: 2   MPPEQETRITGDPANVLGANRIENVTIHAAEPASNVSPCLEDQTPDGQQTTRPQFSILRE 61

Query: 153 SLRPVTLKFEDVMYAIKLRPTDGNCFASPDPKPDRIVLNGVSGMVRPGELL 1
           SLRPVTLKFEDV+Y IKLR T+G+CF SP+PK  R VLNGVSG+ RPGELL
Sbjct: 62  SLRPVTLKFEDVVYVIKLRSTEGSCFGSPEPKQSRTVLNGVSGIARPGELL 112


>emb|CBI27088.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  117 bits (293), Expect = 1e-24
 Identities = 62/111 (55%), Positives = 77/111 (69%), Gaps = 3/111 (2%)
 Frame = -2

Query: 324 MMPSKEGAFSGRSARLPVVNRLENTLVHA-EPISNTTSFSNDQIPNKEITSRS--SVLSE 154
           M P +E   +G  A +   NR+EN  +HA EP SN +    DQ P+ + T+R   S+L E
Sbjct: 2   MPPEQETRITGDPANVLGANRIENVTIHAAEPASNVSPCLEDQTPDGQQTTRPQFSILRE 61

Query: 153 SLRPVTLKFEDVMYAIKLRPTDGNCFASPDPKPDRIVLNGVSGMVRPGELL 1
           SLRPVTLKFEDV+Y IKLR T+G+CF SP+PK  R VLNGVSG+ RPGELL
Sbjct: 62  SLRPVTLKFEDVVYVIKLRSTEGSCFGSPEPKQSRTVLNGVSGIARPGELL 112


>emb|CAN62390.1| hypothetical protein VITISV_039480 [Vitis vinifera]
          Length = 696

 Score =  113 bits (282), Expect = 2e-23
 Identities = 60/106 (56%), Positives = 74/106 (69%), Gaps = 3/106 (2%)
 Frame = -2

Query: 309 EGAFSGRSARLPVVNRLENTLVHA-EPISNTTSFSNDQIPNKEITSRS--SVLSESLRPV 139
           E   +G  A +   NR+EN  +HA EP SN +    DQ P+ + T+R   S+L ESLRPV
Sbjct: 27  ETRITGDPANVLGANRIENVTIHAAEPASNVSPCLEDQTPDGQQTTRPQFSILRESLRPV 86

Query: 138 TLKFEDVMYAIKLRPTDGNCFASPDPKPDRIVLNGVSGMVRPGELL 1
           TLKFEDV+Y IKLR T+G+CF SP+PK  R VLNGVSG+ RPGELL
Sbjct: 87  TLKFEDVVYVIKLRSTEGSCFGSPEPKQSRTVLNGVSGIARPGELL 132


>ref|XP_002314895.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222863935|gb|EEF01066.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 683

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 49/99 (49%), Positives = 61/99 (61%), Gaps = 8/99 (8%)
 Frame = -2

Query: 273 VVNRLENTLVHAEP-----ISNTTSFSNDQI---PNKEITSRSSVLSESLRPVTLKFEDV 118
           + N  E   VHAEP     I+NT+S S DQ+     +   SR ++L  SLRPVTL+F DV
Sbjct: 24  LTNWTETVTVHAEPSVSSSINNTSSCSQDQVLQGQQEPALSRFTILRASLRPVTLEFADV 83

Query: 117 MYAIKLRPTDGNCFASPDPKPDRIVLNGVSGMVRPGELL 1
            Y++ L  T G  F S +PK  R VLNG SG+VRPGELL
Sbjct: 84  AYSVSLS-TKGTWFTSSEPKSTRTVLNGASGIVRPGELL 121


>ref|XP_003520157.1| PREDICTED: ABC transporter G family member 21-like [Glycine max]
          Length = 679

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 50/122 (40%), Positives = 68/122 (55%), Gaps = 14/122 (11%)
 Frame = -2

Query: 324 MMPSKEGAFSGRSARLPVVNRLENTLVHAEPISNTTS-----FSNDQIPNKEITS----- 175
           M P +E + +     +P  NR EN+ VHAEP S+ T+     F+++ I N   +      
Sbjct: 1   MPPQQETSITSNIPAIP--NRPENSYVHAEPPSSATNDIKPTFTSNDIHNNNSSQHHQAA 58

Query: 174 ----RSSVLSESLRPVTLKFEDVMYAIKLRPTDGNCFASPDPKPDRIVLNGVSGMVRPGE 7
               R SVL +SLRPVTLKFEDV Y+I        C +S  PK  + VLNGV+GMV P E
Sbjct: 59  PSAPRFSVLQQSLRPVTLKFEDVSYSITFGRDKNGCVSSQKPKHTKTVLNGVTGMVGPRE 118

Query: 6   LL 1
           ++
Sbjct: 119 VM 120


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