BLASTX nr result

ID: Coptis21_contig00018015 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018015
         (913 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266866.2| PREDICTED: uncharacterized protein LOC100261...   179   1e-42
ref|XP_002525279.1| Histone H1.1, putative [Ricinus communis] gi...   173   6e-41
gb|AAZ20445.1| MYBR6 [Malus x domestica]                              164   3e-38
ref|XP_003546290.1| PREDICTED: uncharacterized protein LOC100780...   162   1e-37
emb|CCA29102.1| putative MYB transcription factor [Rosa rugosa]       161   2e-37

>ref|XP_002266866.2| PREDICTED: uncharacterized protein LOC100261713 [Vitis vinifera]
           gi|296083034|emb|CBI22438.3| unnamed protein product
           [Vitis vinifera]
          Length = 300

 Score =  179 bits (453), Expect = 1e-42
 Identities = 94/165 (56%), Positives = 119/165 (72%)
 Frame = -2

Query: 912 RKTQEIVKLDENPLVITEVVQIDEDILDVKPLDTINGPSQLSASKKSIPRLDNLVLEAIT 733
           RK     K +ENPL +   VQ D++ +D K L   + P Q++ SK+S  RLDNL+LEAIT
Sbjct: 74  RKVPSAPKAEENPLSLGTAVQSDDETVDTKALALPSNPVQITGSKRSFSRLDNLILEAIT 133

Query: 732 SLKEPSGSKRTNIAMYIEDQYYAPPHFQRILSAKLKDLTASGKLIKVHCKYRIAPSSAFS 553
           +LKEP GS +T IA YIEDQY APP+F+R+LSAKLK  T +GKLIKV  KYRIA + AFS
Sbjct: 134 NLKEPGGSNKTTIATYIEDQYRAPPNFKRLLSAKLKFFTTNGKLIKVKRKYRIAHTPAFS 193

Query: 552 EVRRNSEMLLLEGRQGDYVGIEKEKMRILTEAQVDAEIAKLRNMT 418
           E RRNS M  LEGRQG    ++K+ + ILT+AQVD E+A++R MT
Sbjct: 194 ERRRNSSMPFLEGRQGFSPKVDKDDIHILTKAQVDFELAQMRGMT 238


>ref|XP_002525279.1| Histone H1.1, putative [Ricinus communis]
           gi|223535437|gb|EEF37107.1| Histone H1.1, putative
           [Ricinus communis]
          Length = 303

 Score =  173 bits (438), Expect = 6e-41
 Identities = 88/165 (53%), Positives = 124/165 (75%)
 Frame = -2

Query: 912 RKTQEIVKLDENPLVITEVVQIDEDILDVKPLDTINGPSQLSASKKSIPRLDNLVLEAIT 733
           +K+ +  K DENP  ++ VVQ +E+I+D KP+   NG  +   SK+ + RLDNL+LEAIT
Sbjct: 73  KKSPQTPKRDENPKALSSVVQGNEEIVDAKPIAVSNGTPKNVGSKELLARLDNLILEAIT 132

Query: 732 SLKEPSGSKRTNIAMYIEDQYYAPPHFQRILSAKLKDLTASGKLIKVHCKYRIAPSSAFS 553
           +L+EPSGS R +IA+YIE++Y+APP+  ++L+ KLK LTASGKLIKV  KYRIAPSSA S
Sbjct: 133 TLREPSGSDRPSIALYIEEKYWAPPNLMKLLAGKLKLLTASGKLIKVKHKYRIAPSSAVS 192

Query: 552 EVRRNSEMLLLEGRQGDYVGIEKEKMRILTEAQVDAEIAKLRNMT 418
           E RR+S ++ +EG+Q D    EK   +ILT++QVD E++K++ MT
Sbjct: 193 EGRRSSPLVRIEGKQKDSPKSEKSNTKILTKSQVDQELSKIKGMT 237


>gb|AAZ20445.1| MYBR6 [Malus x domestica]
          Length = 304

 Score =  164 bits (414), Expect = 3e-38
 Identities = 87/161 (54%), Positives = 119/161 (73%), Gaps = 3/161 (1%)
 Frame = -2

Query: 891 KLDENPLVITEVVQIDEDILDVKPLDTINGPSQLSASKKS---IPRLDNLVLEAITSLKE 721
           K + NPL ++ V+Q  E+++D KPL    G SQ   SK S   I RLD+L+LEAIT+LKE
Sbjct: 80  KHENNPLAVSTVIQSHEEVVDAKPLAISGGKSQTIESKDSKQPIARLDHLILEAITNLKE 139

Query: 720 PSGSKRTNIAMYIEDQYYAPPHFQRILSAKLKDLTASGKLIKVHCKYRIAPSSAFSEVRR 541
           P GS R  IAM+IE+QY+APP  +++LS+KLK++TA+GKLIKV  +YRI  SSA SE RR
Sbjct: 140 PGGSDRAAIAMHIEEQYWAPPKLKKLLSSKLKNMTATGKLIKVKHRYRIPLSSATSEKRR 199

Query: 540 NSEMLLLEGRQGDYVGIEKEKMRILTEAQVDAEIAKLRNMT 418
           +S  LLLEG+Q D +  +K  + ILT++QVDA++ K+R+MT
Sbjct: 200 SSSALLLEGKQKDSLRKDKSDVNILTKSQVDADLTKMRSMT 240


>ref|XP_003546290.1| PREDICTED: uncharacterized protein LOC100780698 [Glycine max]
          Length = 299

 Score =  162 bits (410), Expect = 1e-37
 Identities = 86/165 (52%), Positives = 117/165 (70%)
 Frame = -2

Query: 912 RKTQEIVKLDENPLVITEVVQIDEDILDVKPLDTINGPSQLSASKKSIPRLDNLVLEAIT 733
           R+  ++ + DEN + IT VV  DE+I+DVKPL        +   K+S   LD L++EAIT
Sbjct: 74  RRVHQVPRQDENSMAITPVVPSDEEIVDVKPLQVSRDIVHIPGPKRSNLSLDKLIMEAIT 133

Query: 732 SLKEPSGSKRTNIAMYIEDQYYAPPHFQRILSAKLKDLTASGKLIKVHCKYRIAPSSAFS 553
           SLKE  GS +T IA +IEDQY+A P  + +LSAKLK LTASGKLIKV+ KYRIAP +A+S
Sbjct: 134 SLKENGGSNKTAIAAFIEDQYWALPGLKSMLSAKLKFLTASGKLIKVNRKYRIAPIAAYS 193

Query: 552 EVRRNSEMLLLEGRQGDYVGIEKEKMRILTEAQVDAEIAKLRNMT 418
           + RRNS ML L+GRQ   + I++++  ILT +Q+D E+ K+R+MT
Sbjct: 194 DRRRNSSMLYLKGRQKASMKIDRDETNILTRSQIDLELEKIRSMT 238


>emb|CCA29102.1| putative MYB transcription factor [Rosa rugosa]
          Length = 301

 Score =  161 bits (407), Expect = 2e-37
 Identities = 83/165 (50%), Positives = 112/165 (67%)
 Frame = -2

Query: 912 RKTQEIVKLDENPLVITEVVQIDEDILDVKPLDTINGPSQLSASKKSIPRLDNLVLEAIT 733
           ++T    K D +PL ++  VQ +E+  D KPL +  G  Q + SK  I RLD+L+ EAIT
Sbjct: 73  KRTTPTAKNDNSPLAVSTAVQSNEETADAKPLASSGGKVQTTESKPPIARLDHLIFEAIT 132

Query: 732 SLKEPSGSKRTNIAMYIEDQYYAPPHFQRILSAKLKDLTASGKLIKVHCKYRIAPSSAFS 553
           +LKEP GS R  I  YIEDQY+AP +  ++LS KLK +TA+GKL+KV  +YRI P+SA S
Sbjct: 133 NLKEPRGSDRNTITTYIEDQYWAPSNLSKLLSTKLKHMTANGKLVKVKHRYRIPPNSATS 192

Query: 552 EVRRNSEMLLLEGRQGDYVGIEKEKMRILTEAQVDAEIAKLRNMT 418
           E RRNS  LL EG+Q D    +K  + ILT++QVDAE+  +R+MT
Sbjct: 193 EKRRNSSTLLSEGKQKDSTRADKSVVSILTKSQVDAELTMIRSMT 237


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