BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018003
         (664 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001497150.1| coat protein [Black raspberry virus F] gi|15...    57   3e-06

>ref|YP_001497150.1| coat protein [Black raspberry virus F] gi|156186255|gb|ABU55398.1|
           coat protein [Black raspberry virus F]
          Length = 769

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 17/89 (19%)
 Frame = +3

Query: 147 VEQPMTYLGKVKSVLIDGPTDIDGIDRKYISTDGKLLFS-----------------TQHF 275
           V QPMT LGK+ +      + +DGI + Y++ +G +  +                 + H 
Sbjct: 51  VNQPMTPLGKMTARFGSTVSTLDGISKPYLTPEGVINLNAIGDVLKSTGGMTSNAWSLHM 110

Query: 276 NVAEEWSWADNHVGLLVNAYRYMLLKKIE 362
            V + W+WADNHV LLVN  RY L+K I+
Sbjct: 111 GVVKGWNWADNHVPLLVNMLRYTLIKHIQ 139