BLASTX nr result

ID: Coptis21_contig00017885 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017885
         (647 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310508.1| predicted protein [Populus trichocarpa] gi|2...    88   2e-15
ref|XP_002275031.1| PREDICTED: uncharacterized protein LOC100262...    87   2e-15
ref|XP_002307017.1| predicted protein [Populus trichocarpa] gi|2...    87   3e-15
ref|XP_002278261.2| PREDICTED: uncharacterized protein LOC100247...    82   1e-13
ref|XP_002278324.2| PREDICTED: uncharacterized protein LOC100259...    82   1e-13

>ref|XP_002310508.1| predicted protein [Populus trichocarpa] gi|222853411|gb|EEE90958.1|
           predicted protein [Populus trichocarpa]
          Length = 218

 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 46/99 (46%), Positives = 55/99 (55%)
 Frame = +3

Query: 117 GGHXXXXXXXXXXXGALFCLAFLSFVVCCFITHMXXXXXXYVQKTDVMKADEHLKVQEGI 296
           G H           G LF LAFLS  +CCFI          VQKT++++ DEH KVQE I
Sbjct: 98  GHHSTVIIVVFVSLGGLFFLAFLSVALCCFIKKKKKKT---VQKTEILEFDEHTKVQEAI 154

Query: 297 VPGQHGTRAVALTAEENIHFQEESKKNEMAREGTHAKPA 413
           VPG HG +   L  EE++H  EE KKNE   EG+H K A
Sbjct: 155 VPGPHGEKITVLNIEEDVHLVEEIKKNEKLTEGSHIKSA 193


>ref|XP_002275031.1| PREDICTED: uncharacterized protein LOC100262544 [Vitis vinifera]
           gi|147805256|emb|CAN71192.1| hypothetical protein
           VITISV_019120 [Vitis vinifera]
          Length = 300

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 49/123 (39%), Positives = 68/123 (55%), Gaps = 1/123 (0%)
 Frame = +3

Query: 117 GGHXXXXXXXXXXXGALFCLAFLSFVVCCFITHMXXXXXXYVQKTDVMKADEHLKVQEGI 296
           G H           G LF LAFLS  +CCFI          VQ+TD++  DEHLKV E I
Sbjct: 174 GHHSTVIIIVFVSLGGLFFLAFLSVALCCFIKKKKKNM---VQETDIVTIDEHLKVHEAI 230

Query: 297 VPGQHGTRAVALTAEENIHFQEESKKNEMAREGTHAKPA-DIEEGLQAKGKDTIASSSGA 473
           +PG HG + + L+ E+++H QEE KKNE   +G+H +   D  + L     D  AS+S +
Sbjct: 231 IPGPHGPQVMILSIEDDVHIQEEIKKNEKEIQGSHVRSTQDFPQAL-----DMEASTSES 285

Query: 474 TEH 482
           ++H
Sbjct: 286 SQH 288


>ref|XP_002307017.1| predicted protein [Populus trichocarpa] gi|222856466|gb|EEE94013.1|
           predicted protein [Populus trichocarpa]
          Length = 265

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 45/99 (45%), Positives = 55/99 (55%)
 Frame = +3

Query: 117 GGHXXXXXXXXXXXGALFCLAFLSFVVCCFITHMXXXXXXYVQKTDVMKADEHLKVQEGI 296
           G H           G LF LAFLS  +CCFI          VQKT++++ DEH KVQE I
Sbjct: 145 GHHSTVIIVVFVSLGGLFFLAFLSVALCCFIKKKKKKT---VQKTEILEFDEHTKVQEAI 201

Query: 297 VPGQHGTRAVALTAEENIHFQEESKKNEMAREGTHAKPA 413
           +PG HG +   L  EE++H  EE KKNE   EG+H K A
Sbjct: 202 IPGPHGEKITVLNIEEDVHLVEEIKKNEKLAEGSHIKLA 240


>ref|XP_002278261.2| PREDICTED: uncharacterized protein LOC100247264 [Vitis vinifera]
          Length = 329

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 42/86 (48%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
 Frame = +3

Query: 159 GALFCLAFLSFVVCCFITHMXXXXXXYVQKTDVMKADEHLKVQEGIVPGQHGTRAVALTA 338
           G LF LAFLS  +CCF+          VQ+TD++K DEHL V+E IVPG HG +AV L  
Sbjct: 81  GGLFFLAFLSVALCCFLKKRKKKM---VQETDIIKVDEHLTVKEAIVPGPHGEQAVVLFV 137

Query: 339 EENIHFQEESKKNEMAREG-THAKPA 413
           ++++H QEE +KNE   +G  H K A
Sbjct: 138 DDDVHIQEEIRKNEKFGQGHLHGKSA 163



 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 32/68 (47%), Positives = 44/68 (64%)
 Frame = +3

Query: 240 VQKTDVMKADEHLKVQEGIVPGQHGTRAVALTAEENIHFQEESKKNEMAREGTHAKPADI 419
           VQ+T+++  DEH KV+EG++ G HG + V LT E+++H QEE +KNE   EG H K A  
Sbjct: 248 VQETEIIDVDEHSKVKEGVIAGPHGEQVVLLTEEDDVHIQEEIRKNEKIGEGLHGKSAQG 307

Query: 420 EEGLQAKG 443
             G   KG
Sbjct: 308 ITGAIEKG 315



 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 32/72 (44%), Positives = 45/72 (62%)
 Frame = +3

Query: 240 VQKTDVMKADEHLKVQEGIVPGQHGTRAVALTAEENIHFQEESKKNEMAREGTHAKPADI 419
           VQ+T+++  DEHLKV+E ++ G HG +A+AL  E++ H  EE +KNE   EG H K A  
Sbjct: 177 VQETEMVNVDEHLKVKEAMLAGPHGAQALALCMEDDKHIHEEIQKNEKLGEGLHGKAAKG 236

Query: 420 EEGLQAKGKDTI 455
             G   KGK  +
Sbjct: 237 ITGAIGKGKKMV 248


>ref|XP_002278324.2| PREDICTED: uncharacterized protein LOC100259240 [Vitis vinifera]
          Length = 518

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 42/86 (48%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
 Frame = +3

Query: 159 GALFCLAFLSFVVCCFITHMXXXXXXYVQKTDVMKADEHLKVQEGIVPGQHGTRAVALTA 338
           G LF LAFLS  +CCF+          VQ+TD++K DEHL V+E IVPG HG +AV L  
Sbjct: 130 GGLFFLAFLSVALCCFLKKRKKKM---VQETDIIKVDEHLTVKEAIVPGPHGEQAVVLFV 186

Query: 339 EENIHFQEESKKNEMAREG-THAKPA 413
           ++++H QEE +KNE   +G  H K A
Sbjct: 187 DDDVHIQEEIRKNEKFGQGHLHGKSA 212



 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 31/68 (45%), Positives = 43/68 (63%)
 Frame = +3

Query: 240 VQKTDVMKADEHLKVQEGIVPGQHGTRAVALTAEENIHFQEESKKNEMAREGTHAKPADI 419
           VQ+T+++  DEH K +EG++ G HG + V LT E+++H QEE +KNE   EG H K A  
Sbjct: 437 VQETEIIDVDEHSKAKEGVIAGPHGEQVVLLTEEDDVHIQEEIRKNEKIGEGLHGKSAQG 496

Query: 420 EEGLQAKG 443
             G   KG
Sbjct: 497 ITGAIEKG 504



 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 33/72 (45%), Positives = 45/72 (62%)
 Frame = +3

Query: 240 VQKTDVMKADEHLKVQEGIVPGQHGTRAVALTAEENIHFQEESKKNEMAREGTHAKPADI 419
           VQ+T+++  DEHLKV+E ++ G HG +A+AL  E++ H  EE KKNE   EG H K A  
Sbjct: 226 VQETEMVNVDEHLKVKEAMLAGPHGAQALALCMEDDKHIHEEIKKNEKLGEGLHGKAAKG 285

Query: 420 EEGLQAKGKDTI 455
             G   KGK  +
Sbjct: 286 ITGAIGKGKKMV 297



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 30/72 (41%), Positives = 43/72 (59%)
 Frame = +3

Query: 240 VQKTDVMKADEHLKVQEGIVPGQHGTRAVALTAEENIHFQEESKKNEMAREGTHAKPADI 419
           VQ+T+++  DEH KV+E ++   HG +A+AL  E++ H  EE +KNE   EG H K A  
Sbjct: 297 VQETEIIDVDEHSKVKEAML-APHGAQALALCMEDDKHIHEEIQKNEKLGEGLHGKAAKG 355

Query: 420 EEGLQAKGKDTI 455
             G   KGK  +
Sbjct: 356 ITGAIGKGKKMV 367



 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 29/72 (40%), Positives = 42/72 (58%)
 Frame = +3

Query: 240 VQKTDVMKADEHLKVQEGIVPGQHGTRAVALTAEENIHFQEESKKNEMAREGTHAKPADI 419
           VQ+T+++  DEH KV+E ++   HG +A+AL  E++ H  EE +KNE   EG H K A  
Sbjct: 367 VQETEIIDVDEHSKVKEAML-APHGAQALALCMEDDKHIHEEIQKNEKLGEGLHGKAAKG 425

Query: 420 EEGLQAKGKDTI 455
             G   KG   +
Sbjct: 426 ITGAIGKGNKMV 437


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