BLASTX nr result

ID: Coptis21_contig00017877 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017877
         (877 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34692.3| unnamed protein product [Vitis vinifera]              253   3e-65
ref|XP_002269437.1| PREDICTED: protein LURP-one-related 4 [Vitis...   252   7e-65
emb|CBI34691.3| unnamed protein product [Vitis vinifera]              238   1e-60
ref|XP_002269469.1| PREDICTED: protein LURP-one-related 4 [Vitis...   237   2e-60
ref|XP_002269503.1| PREDICTED: protein LURP-one-related 4 [Vitis...   235   9e-60

>emb|CBI34692.3| unnamed protein product [Vitis vinifera]
          Length = 210

 Score =  253 bits (647), Expect = 3e-65
 Identities = 124/216 (57%), Positives = 161/216 (74%)
 Frame = -3

Query: 854 MARVYPRAGLTFPXXXXXXXXXXSPHVTSEREVFTIWMKSIVLNGNGCTVFDASGDIVYR 675
           MA+V+P+     P             +TS+RE FTIWMKS+V+ GNGCTVF++ G+IVYR
Sbjct: 1   MAKVHPQTFTAAPLSPPSDSC-----ITSKREAFTIWMKSLVIQGNGCTVFNSDGEIVYR 55

Query: 674 IDNYNSKCSNEVYLMDLRGSVLFTIHKKKLGLFGRWEGYRATSPMLENKKPWFQVRKACR 495
           IDNY+ KCS+EVYLMDL+G VLFTI ++KL +FGRWEGY++      N+KPWFQVRK CR
Sbjct: 56  IDNYDKKCSSEVYLMDLQGKVLFTILQRKLRVFGRWEGYKSNGSKGNNQKPWFQVRKNCR 115

Query: 494 MSKSNSPCEVTVEGDNNESRCYRIETMPNKSACKIVNQGGGLVAEVKKKQTSSGVALGDD 315
           +    S C+VTV  +  +S CYRI+ +  KSA KIV+  GGL+AEV++KQTSSGV LG+D
Sbjct: 116 ILGGGSSCQVTVRPNEAQSYCYRIQGLTGKSAFKIVDSQGGLLAEVEQKQTSSGVVLGED 175

Query: 314 VLTLVVEPHIDHSLIMGIVAVYGLINRKM*RNFVCV 207
           VL LVVEPH+DHSL+M +VAVYGLI+ ++  NF C+
Sbjct: 176 VLNLVVEPHVDHSLVMALVAVYGLIHHRI--NFSCL 209


>ref|XP_002269437.1| PREDICTED: protein LURP-one-related 4 [Vitis vinifera]
          Length = 204

 Score =  252 bits (644), Expect = 7e-65
 Identities = 122/209 (58%), Positives = 157/209 (75%)
 Frame = -3

Query: 854 MARVYPRAGLTFPXXXXXXXXXXSPHVTSEREVFTIWMKSIVLNGNGCTVFDASGDIVYR 675
           MA+V+P+     P             +TS+RE FTIWMKS+V+ GNGCTVF++ G+IVYR
Sbjct: 1   MAKVHPQTFTAAPLSPPSDSC-----ITSKREAFTIWMKSLVIQGNGCTVFNSDGEIVYR 55

Query: 674 IDNYNSKCSNEVYLMDLRGSVLFTIHKKKLGLFGRWEGYRATSPMLENKKPWFQVRKACR 495
           IDNY+ KCS+EVYLMDL+G VLFTI ++KL +FGRWEGY++      N+KPWFQVRK CR
Sbjct: 56  IDNYDKKCSSEVYLMDLQGKVLFTILQRKLRVFGRWEGYKSNGSKGNNQKPWFQVRKNCR 115

Query: 494 MSKSNSPCEVTVEGDNNESRCYRIETMPNKSACKIVNQGGGLVAEVKKKQTSSGVALGDD 315
           +    S C+VTV  +  +S CYRI+ +  KSA KIV+  GGL+AEV++KQTSSGV LG+D
Sbjct: 116 ILGGGSSCQVTVRPNEAQSYCYRIQGLTGKSAFKIVDSQGGLLAEVEQKQTSSGVVLGED 175

Query: 314 VLTLVVEPHIDHSLIMGIVAVYGLINRKM 228
           VL LVVEPH+DHSL+M +VAVYGLI+ +M
Sbjct: 176 VLNLVVEPHVDHSLVMALVAVYGLIHHRM 204


>emb|CBI34691.3| unnamed protein product [Vitis vinifera]
          Length = 399

 Score =  238 bits (607), Expect = 1e-60
 Identities = 119/212 (56%), Positives = 152/212 (71%)
 Frame = -3

Query: 863 LTNMARVYPRAGLTFPXXXXXXXXXXSPHVTSEREVFTIWMKSIVLNGNGCTVFDASGDI 684
           L  MA+V+P+     P             +TS RE FT+WMKS+V+ GNG TVF++ G+I
Sbjct: 191 LVAMAKVHPQMPAAVPPPPPPPSDSC---ITSRRETFTLWMKSLVIQGNGYTVFNSDGEI 247

Query: 683 VYRIDNYNSKCSNEVYLMDLRGSVLFTIHKKKLGLFGRWEGYRATSPMLENKKPWFQVRK 504
           VYRIDNY+ KCS+EVYLMDL+G VLFTI ++KL +FGRWEGY+      +++KP FQVRK
Sbjct: 248 VYRIDNYDKKCSSEVYLMDLQGKVLFTILQRKLHVFGRWEGYKCNGSKADSQKPCFQVRK 307

Query: 503 ACRMSKSNSPCEVTVEGDNNESRCYRIETMPNKSACKIVNQGGGLVAEVKKKQTSSGVAL 324
            CR+    S CEVTV  +  +S  YRI+ +  KS  KIVN  GG++AEVK+KQTSSGV L
Sbjct: 308 HCRILGGGSSCEVTVRPNEAQSCYYRIQGLAGKSTFKIVNSEGGVMAEVKQKQTSSGVVL 367

Query: 323 GDDVLTLVVEPHIDHSLIMGIVAVYGLINRKM 228
           GDDVL LVVEPH+DHSL+M +VAV GLI+ +M
Sbjct: 368 GDDVLNLVVEPHVDHSLVMALVAVCGLIHHRM 399



 Score =  226 bits (577), Expect = 4e-57
 Identities = 107/176 (60%), Positives = 139/176 (78%)
 Frame = -3

Query: 779 HVTSEREVFTIWMKSIVLNGNGCTVFDASGDIVYRIDNYNSKCSNEVYLMDLRGSVLFTI 600
           ++TS RE FT+WMKS+V+ GNG TVF++ G+IVYR+DNY+ KCS+EVYLMDL+G VLFTI
Sbjct: 19  YITSRRETFTLWMKSLVIRGNGYTVFNSDGEIVYRMDNYDKKCSSEVYLMDLQGKVLFTI 78

Query: 599 HKKKLGLFGRWEGYRATSPMLENKKPWFQVRKACRMSKSNSPCEVTVEGDNNESRCYRIE 420
            ++KL +FGRWEGY+ +   + ++KP FQVRK CR+    S CEVTV  +  +S  YRI+
Sbjct: 79  LRRKLRVFGRWEGYKCSGSKVGSQKPCFQVRKHCRILGGGSSCEVTVRPNEAQSYHYRIQ 138

Query: 419 TMPNKSACKIVNQGGGLVAEVKKKQTSSGVALGDDVLTLVVEPHIDHSLIMGIVAV 252
            +  KS  KIVN  GG++AEVK+KQTSSGV LGDDVL LVVEPH+DHSL+M +VA+
Sbjct: 139 GLAGKSTFKIVNSEGGVMAEVKQKQTSSGVVLGDDVLDLVVEPHVDHSLVMALVAM 194


>ref|XP_002269469.1| PREDICTED: protein LURP-one-related 4 [Vitis vinifera]
          Length = 206

 Score =  237 bits (605), Expect = 2e-60
 Identities = 118/209 (56%), Positives = 151/209 (72%)
 Frame = -3

Query: 854 MARVYPRAGLTFPXXXXXXXXXXSPHVTSEREVFTIWMKSIVLNGNGCTVFDASGDIVYR 675
           MA+V+P+     P             +TS RE FT+WMKS+V+ GNG TVF++ G+IVYR
Sbjct: 1   MAKVHPQMPAAVPPPPPPPSDSC---ITSRRETFTLWMKSLVIQGNGYTVFNSDGEIVYR 57

Query: 674 IDNYNSKCSNEVYLMDLRGSVLFTIHKKKLGLFGRWEGYRATSPMLENKKPWFQVRKACR 495
           IDNY+ KCS+EVYLMDL+G VLFTI ++KL +FGRWEGY+      +++KP FQVRK CR
Sbjct: 58  IDNYDKKCSSEVYLMDLQGKVLFTILQRKLHVFGRWEGYKCNGSKADSQKPCFQVRKHCR 117

Query: 494 MSKSNSPCEVTVEGDNNESRCYRIETMPNKSACKIVNQGGGLVAEVKKKQTSSGVALGDD 315
           +    S CEVTV  +  +S  YRI+ +  KS  KIVN  GG++AEVK+KQTSSGV LGDD
Sbjct: 118 ILGGGSSCEVTVRPNEAQSCYYRIQGLAGKSTFKIVNSEGGVMAEVKQKQTSSGVVLGDD 177

Query: 314 VLTLVVEPHIDHSLIMGIVAVYGLINRKM 228
           VL LVVEPH+DHSL+M +VAV GLI+ +M
Sbjct: 178 VLNLVVEPHVDHSLVMALVAVCGLIHHRM 206


>ref|XP_002269503.1| PREDICTED: protein LURP-one-related 4 [Vitis vinifera]
          Length = 202

 Score =  235 bits (600), Expect = 9e-60
 Identities = 112/184 (60%), Positives = 145/184 (78%)
 Frame = -3

Query: 779 HVTSEREVFTIWMKSIVLNGNGCTVFDASGDIVYRIDNYNSKCSNEVYLMDLRGSVLFTI 600
           ++TS RE FT+WMKS+V+ GNG TVF++ G+IVYR+DNY+ KCS+EVYLMDL+G VLFTI
Sbjct: 19  YITSRRETFTLWMKSLVIRGNGYTVFNSDGEIVYRMDNYDKKCSSEVYLMDLQGKVLFTI 78

Query: 599 HKKKLGLFGRWEGYRATSPMLENKKPWFQVRKACRMSKSNSPCEVTVEGDNNESRCYRIE 420
            ++KL +FGRWEGY+ +   + ++KP FQVRK CR+    S CEVTV  +  +S  YRI+
Sbjct: 79  LRRKLRVFGRWEGYKCSGSKVGSQKPCFQVRKHCRILGGGSSCEVTVRPNEAQSYHYRIQ 138

Query: 419 TMPNKSACKIVNQGGGLVAEVKKKQTSSGVALGDDVLTLVVEPHIDHSLIMGIVAVYGLI 240
            +  KS  KIVN  GG++AEVK+KQTSSGV LGDDVL LVVEPH+DHSL+M +VAV GLI
Sbjct: 139 GLAGKSTFKIVNSEGGVMAEVKQKQTSSGVVLGDDVLDLVVEPHVDHSLVMALVAVCGLI 198

Query: 239 NRKM 228
           + +M
Sbjct: 199 HHRM 202


Top