BLASTX nr result
ID: Coptis21_contig00017855
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00017855
(947 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI35900.3| unnamed protein product [Vitis vinifera] 293 5e-77
ref|XP_002274489.2| PREDICTED: LOW QUALITY PROTEIN: midasin-like... 288 2e-75
ref|XP_002521362.1| ATP binding protein, putative [Ricinus commu... 278 2e-72
gb|EEC67090.1| hypothetical protein OsI_33882 [Oryza sativa Indi... 262 8e-68
ref|XP_002327931.1| predicted protein [Populus trichocarpa] gi|2... 255 1e-65
>emb|CBI35900.3| unnamed protein product [Vitis vinifera]
Length = 5267
Score = 293 bits (749), Expect = 5e-77
Identities = 161/315 (51%), Positives = 204/315 (64%)
Frame = +3
Query: 3 SQLLEKDGAQLLDAVRASLRLLLAESQIFSTXXXXXXXXXXVHQSASALSGKDLGLVNIG 182
S+L K G LL++V+ + R LL E +FS V + A+ D V
Sbjct: 111 SELPAKAGKHLLNSVQTAYRFLLMEPDVFSRLWDWSCFLDLVQKLANLDMVDDDKFVKNI 170
Query: 183 FDIRWCAVQIISITLKMSERATVNFTKDADKASTTVNFTMDAEKALECFLRWEEFCQDVY 362
DIRWC +QI+ + LKM++ A NF + AE+AL C LRWEE C+DV
Sbjct: 171 SDIRWCGLQILFVILKMNDTAIANFG-------------IGAEEALGCLLRWEELCEDVA 217
Query: 363 LEKAGWYLGANVLEMGTYVDRDLVFNQENCLKSFDFRPSNVSLSLTNGSKTLRKNRRHIS 542
EKAGWY ++ + ++ D+ F+QENCL+ F VS S ++ + RR ++
Sbjct: 218 QEKAGWYFESSKQQKPDSINPDIDFDQENCLRFFGLNNLAVSSSQFPEAQPSTRIRRLVT 277
Query: 543 RNANLSSLECSFVLTSAVRKNFEMVLMAVSQKWPVLLYGPTGAGKTALISYLARVSGNRV 722
N + S VLT +++K++EMVL+AVSQKWPVLLYGP G GKTALIS LAR SGN+V
Sbjct: 278 WNGD--SCGNPLVLTLSLKKSYEMVLLAVSQKWPVLLYGPAGVGKTALISKLARDSGNQV 335
Query: 723 LSIHMDEQMDGKTLIGAYVCTERPGEFRWQPGSLTQAILNGFWVVFEDIDKAPSDVQSIL 902
LSIHMD+Q+DGKTLIG+YVC ERPGEFRWQPGSLTQA +NGFWVVFE IDKAPSDVQSIL
Sbjct: 336 LSIHMDDQIDGKTLIGSYVCMERPGEFRWQPGSLTQAAMNGFWVVFEGIDKAPSDVQSIL 395
Query: 903 LPLLEGTHSYVAGSG 947
LPLLEG S++ G
Sbjct: 396 LPLLEGASSFLTSHG 410
Score = 67.4 bits (163), Expect = 5e-09
Identities = 41/108 (37%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
Frame = +3
Query: 600 KNFEMVLMAVSQKWPVLLYGPTGAGKTALISYLARVSGNRVLSIHMDEQMDGKTLIGAYV 779
KN VL A+ PVLL G G GKT+LI L + SG+ V+ I++ EQ D L+G+ +
Sbjct: 1793 KNAFRVLRAMQLAKPVLLEGSPGVGKTSLIVALGKFSGHPVVRINLSEQTDIMDLLGSDL 1852
Query: 780 CTERPG--EFRWQPGSLTQAILNGFWVVFEDIDKAPSDVQSILLPLLE 917
E +F W G L QA+ G WV+ ++++ AP V L +L+
Sbjct: 1853 PVESSEGIKFAWSDGILLQALKQGSWVLLDELNLAPQSVLEGLNAILD 1900
Score = 57.0 bits (136), Expect = 6e-06
Identities = 27/70 (38%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Frame = +3
Query: 573 SFVLTSAVRKNFEMVLMAVS-QKWPVLLYGPTGAGKTALISYLARVSGNRVLSIHMDEQM 749
+++LT +VR++ + AV +++PVLL GPT +GKT+L+ YLA ++G+ + I+ E
Sbjct: 860 NYILTKSVREHLRNLARAVLIKRYPVLLQGPTSSGKTSLVQYLAAITGHEFVRINNHEHT 919
Query: 750 DGKTLIGAYV 779
D + +G+YV
Sbjct: 920 DLQEYLGSYV 929
>ref|XP_002274489.2| PREDICTED: LOW QUALITY PROTEIN: midasin-like [Vitis vinifera]
Length = 5286
Score = 288 bits (736), Expect = 2e-75
Identities = 158/311 (50%), Positives = 200/311 (64%)
Frame = +3
Query: 15 EKDGAQLLDAVRASLRLLLAESQIFSTXXXXXXXXXXVHQSASALSGKDLGLVNIGFDIR 194
E LL++V+ + R LL E +FS V + A+ D V DIR
Sbjct: 174 ELPAKHLLNSVQTAYRFLLMEPDVFSRLWDWSCFLDLVQKLANLDMVDDDKFVKNISDIR 233
Query: 195 WCAVQIISITLKMSERATVNFTKDADKASTTVNFTMDAEKALECFLRWEEFCQDVYLEKA 374
WC +QI+ + LKM++ A NF + AE+AL C LRWEE C+DV EKA
Sbjct: 234 WCGLQILFVILKMNDTAIANFG-------------IGAEEALGCLLRWEELCEDVAQEKA 280
Query: 375 GWYLGANVLEMGTYVDRDLVFNQENCLKSFDFRPSNVSLSLTNGSKTLRKNRRHISRNAN 554
GWY ++ + ++ D+ F+QENCL+ F VS S ++ + RR ++ N +
Sbjct: 281 GWYFESSKQQKPDSINPDIDFDQENCLRFFGLNNLAVSSSQFPEAQPSTRIRRLVTWNGD 340
Query: 555 LSSLECSFVLTSAVRKNFEMVLMAVSQKWPVLLYGPTGAGKTALISYLARVSGNRVLSIH 734
S VLT +++K++EMVL+AVSQKWPVLLYGP G GKTALIS LAR SGN+VLSIH
Sbjct: 341 --SCGNPLVLTLSLKKSYEMVLLAVSQKWPVLLYGPAGVGKTALISKLARDSGNQVLSIH 398
Query: 735 MDEQMDGKTLIGAYVCTERPGEFRWQPGSLTQAILNGFWVVFEDIDKAPSDVQSILLPLL 914
MD+Q+DGKTLIG+YVC ERPGEFRWQPGSLTQA +NGFWVVFE IDKAPSDVQSILLPLL
Sbjct: 399 MDDQIDGKTLIGSYVCMERPGEFRWQPGSLTQAAMNGFWVVFEGIDKAPSDVQSILLPLL 458
Query: 915 EGTHSYVAGSG 947
EG S++ G
Sbjct: 459 EGASSFLTSHG 469
Score = 87.8 bits (216), Expect = 3e-15
Identities = 44/116 (37%), Positives = 77/116 (66%), Gaps = 1/116 (0%)
Frame = +3
Query: 573 SFVLTSAVRKNFEMVLMAVS-QKWPVLLYGPTGAGKTALISYLARVSGNRVLSIHMDEQM 749
+++LT +VR++ + AV +++PVLL GPT +GKT+L+ YLA ++G+ + I+ E
Sbjct: 1076 NYILTKSVREHLRNLARAVLIKRYPVLLQGPTSSGKTSLVQYLAAITGHEFVRINNHEHT 1135
Query: 750 DGKTLIGAYVCTERPGEFRWQPGSLTQAILNGFWVVFEDIDKAPSDVQSILLPLLE 917
D + +G+YV T+ G+ + G L +A+ NG+W+V ++++ APSDV L LL+
Sbjct: 1136 DLQEYLGSYV-TDASGKLVFHEGVLVKAVRNGYWIVLDELNLAPSDVLEALNRLLD 1190
Score = 67.4 bits (163), Expect = 5e-09
Identities = 41/108 (37%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
Frame = +3
Query: 600 KNFEMVLMAVSQKWPVLLYGPTGAGKTALISYLARVSGNRVLSIHMDEQMDGKTLIGAYV 779
KN VL A+ PVLL G G GKT+LI L + SG+ V+ I++ EQ D L+G+ +
Sbjct: 1674 KNAFRVLRAMQLAKPVLLEGSPGVGKTSLIVALGKFSGHPVVRINLSEQTDIMDLLGSDL 1733
Query: 780 CTERPG--EFRWQPGSLTQAILNGFWVVFEDIDKAPSDVQSILLPLLE 917
E +F W G L QA+ G WV+ ++++ AP V L +L+
Sbjct: 1734 PVESSEGIKFAWSDGILLQALKQGSWVLLDELNLAPQSVLEGLNAILD 1781
>ref|XP_002521362.1| ATP binding protein, putative [Ricinus communis]
gi|223539440|gb|EEF41030.1| ATP binding protein, putative
[Ricinus communis]
Length = 5282
Score = 278 bits (710), Expect = 2e-72
Identities = 160/314 (50%), Positives = 210/314 (66%), Gaps = 4/314 (1%)
Frame = +3
Query: 18 KDGAQLLDAVRASLRLLLAESQIFSTXXXXXXXXXXVHQSASA--LSGKDLGLVNIGFDI 191
+D + L R S RLLL E +IFS V + + + G + +++ D+
Sbjct: 167 EDASHCLFTTRLSYRLLLMEPEIFSVRWDWSCFLDLVKITLNRDLIHGFEDEVIS---DM 223
Query: 192 RWCAVQIISITLKMSERATVNFTKDADKASTTVNFTMDAEKALECFLRWEEFCQDVYLEK 371
RWC +QI+SITLKMS+RAT NF + A +A C+LRWEEFCQDV +EK
Sbjct: 224 RWCGIQILSITLKMSDRATENFG-------------VGAAEAASCYLRWEEFCQDVAIEK 270
Query: 372 AGWYLGANVLEMGTYVDRDLVFNQENCLKSFDFRPSNVSLSLTNGSKT--LRKNRRHISR 545
A Y+ ++ + V+ + F+ +N K D L+L+N K + K+RR ++
Sbjct: 271 ACLYVESSEQTTMSSVNGGVDFSLQNFEKPCDHN----LLALSNHCKIKPMLKSRRLVTW 326
Query: 546 NANLSSLECSFVLTSAVRKNFEMVLMAVSQKWPVLLYGPTGAGKTALISYLARVSGNRVL 725
N ++S + FVLTS V+++FEMVL+AVSQ+WP+LLYGP GAGKTALIS LA+ SGN+VL
Sbjct: 327 N-DISGGK-PFVLTSTVKRSFEMVLLAVSQRWPILLYGPAGAGKTALISKLAQDSGNQVL 384
Query: 726 SIHMDEQMDGKTLIGAYVCTERPGEFRWQPGSLTQAILNGFWVVFEDIDKAPSDVQSILL 905
+IHMDEQ+DGKTLIG YVC E+PGEFRWQPGSL QA+LNG+WVVFEDIDKAPSDVQSILL
Sbjct: 385 TIHMDEQIDGKTLIGTYVCAEQPGEFRWQPGSLIQAVLNGYWVVFEDIDKAPSDVQSILL 444
Query: 906 PLLEGTHSYVAGSG 947
PLLEG ++ G G
Sbjct: 445 PLLEGASFFITGHG 458
Score = 88.2 bits (217), Expect = 3e-15
Identities = 45/116 (38%), Positives = 77/116 (66%), Gaps = 1/116 (0%)
Frame = +3
Query: 573 SFVLTSAVRKNFEMVLMAVS-QKWPVLLYGPTGAGKTALISYLARVSGNRVLSIHMDEQM 749
++V+T +V+K E + AV +++PVLL GPT +GKT+L+ YLA SG+ + I+ E
Sbjct: 1063 NYVITKSVKKQLENLARAVFIKRYPVLLQGPTSSGKTSLVQYLAAKSGHEFVRINNHEHT 1122
Query: 750 DGKTLIGAYVCTERPGEFRWQPGSLTQAILNGFWVVFEDIDKAPSDVQSILLPLLE 917
D + +G+Y+ ++ G+ +Q G L +A+ NG+W+V ++++ APSDV L LL+
Sbjct: 1123 DLQEYLGSYI-SDAHGKLIFQEGVLVKAVRNGYWIVLDELNLAPSDVLEALNRLLD 1177
Score = 70.9 bits (172), Expect = 4e-10
Identities = 42/114 (36%), Positives = 63/114 (55%), Gaps = 2/114 (1%)
Frame = +3
Query: 582 LTSAVRKNFEMVLMAVSQKWPVLLYGPTGAGKTALISYLARVSGNRVLSIHMDEQMDGKT 761
L R+N VL A+ PVLL G G GKT+LI L + SG++V+ I++ EQ D
Sbjct: 1653 LAPTTRRNALRVLRAMQLPKPVLLEGSPGVGKTSLIIALGKYSGHKVVRINLSEQTDLMD 1712
Query: 762 LIGAYVCTERPG--EFRWQPGSLTQAILNGFWVVFEDIDKAPSDVQSILLPLLE 917
L+G+ + E +F W G L QA+ G WV+ ++++ AP V L +L+
Sbjct: 1713 LLGSDLPVESDEGMKFAWSDGILLQALKEGCWVLLDELNLAPQSVLEGLNAILD 1766
>gb|EEC67090.1| hypothetical protein OsI_33882 [Oryza sativa Indica Group]
Length = 5024
Score = 262 bits (670), Expect = 8e-68
Identities = 149/303 (49%), Positives = 187/303 (61%)
Frame = +3
Query: 33 LLDAVRASLRLLLAESQIFSTXXXXXXXXXXVHQSASALSGKDLGLVNIGFDIRWCAVQI 212
LLDA + S R L E ++F V+ +A S D L ++ D+RWC +QI
Sbjct: 180 LLDATQVSYRFLELEPRVFCEQWDWSCFLDLVYSTAD-YSLVDDSLYSVVLDLRWCTIQI 238
Query: 213 ISITLKMSERATVNFTKDADKASTTVNFTMDAEKALECFLRWEEFCQDVYLEKAGWYLGA 392
+ + LK S+ A +F AD+A T CFLRW+EFC D LEKA YL A
Sbjct: 239 LMVVLKASDEAVESFGLGADEAFT-------------CFLRWKEFCTDTSLEKASLYLQA 285
Query: 393 NVLEMGTYVDRDLVFNQENCLKSFDFRPSNVSLSLTNGSKTLRKNRRHISRNANLSSLEC 572
++ T D CL D P S+ R+H S S C
Sbjct: 286 EEVDCKTDADG------LTCLA--DSLPDWHEFSV---------GRQHGS-----GSNIC 323
Query: 573 SFVLTSAVRKNFEMVLMAVSQKWPVLLYGPTGAGKTALISYLARVSGNRVLSIHMDEQMD 752
FVLT+ +RK++E+ LMAV+QKWP+LLYGP GAGKTALI+ LA++ GNRVL IHMDEQMD
Sbjct: 324 PFVLTATLRKSYEVALMAVNQKWPILLYGPVGAGKTALINKLAQIGGNRVLFIHMDEQMD 383
Query: 753 GKTLIGAYVCTERPGEFRWQPGSLTQAILNGFWVVFEDIDKAPSDVQSILLPLLEGTHSY 932
G+TLIG+YVCTE+PGEF+W PGSLTQA++ GFW+VFEDIDKAPSDVQSILLPLLEG+ S+
Sbjct: 384 GRTLIGSYVCTEKPGEFKWSPGSLTQAVIKGFWIVFEDIDKAPSDVQSILLPLLEGSSSF 443
Query: 933 VAG 941
G
Sbjct: 444 SVG 446
Score = 84.0 bits (206), Expect = 5e-14
Identities = 45/116 (38%), Positives = 76/116 (65%), Gaps = 1/116 (0%)
Frame = +3
Query: 573 SFVLTSAVRKNFEMVLMAVS-QKWPVLLYGPTGAGKTALISYLARVSGNRVLSIHMDEQM 749
S+VLT++V ++ + AV +K+PVLL GPT +GKT+L+ +LA +G+ + I+ E
Sbjct: 947 SYVLTNSVTEHIVNLARAVYIKKYPVLLQGPTSSGKTSLVRFLAAQTGHEFVRINNHEHT 1006
Query: 750 DGKTLIGAYVCTERPGEFRWQPGSLTQAILNGFWVVFEDIDKAPSDVQSILLPLLE 917
D + +G YV T+ G+ ++Q G+L +A+ G W+V ++++ APSDV L LL+
Sbjct: 1007 DLQEYLGTYV-TDSHGKLQFQEGALVKAVREGHWIVLDELNLAPSDVLEALNRLLD 1061
Score = 70.5 bits (171), Expect = 6e-10
Identities = 42/108 (38%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
Frame = +3
Query: 600 KNFEMVLMAVSQKWPVLLYGPTGAGKTALISYLARVSGNRVLSIHMDEQMDGKTLIGAYV 779
KN VL + P+LL G G GKT+LI LA SG+ V+ I++ EQ D L+G+ +
Sbjct: 1671 KNVFRVLRGMQLPKPLLLEGSPGVGKTSLIVALAGFSGHNVVRINLSEQTDMMDLLGSDL 1730
Query: 780 CTERPG--EFRWQPGSLTQAILNGFWVVFEDIDKAPSDVQSILLPLLE 917
E EF W G L QA+ NG WV+ ++++ AP V L +L+
Sbjct: 1731 PVEGENGMEFAWSDGILLQALKNGSWVLLDELNLAPQSVLEGLNAILD 1778
>ref|XP_002327931.1| predicted protein [Populus trichocarpa] gi|222837340|gb|EEE75719.1|
predicted protein [Populus trichocarpa]
Length = 5317
Score = 255 bits (651), Expect = 1e-65
Identities = 153/317 (48%), Positives = 198/317 (62%), Gaps = 3/317 (0%)
Frame = +3
Query: 6 QLLEKDGAQLLDAVRASLRLLLAESQIFSTXXXXXXXXXXVHQSASA---LSGKDLGLVN 176
QL + LL AVR S RLLL + + FS V + + KD +
Sbjct: 163 QLFQAANHYLL-AVRISYRLLLMQPEFFSEQWNWSCFLDHVKKLVNLDLFHVAKDAKAIA 221
Query: 177 IGFDIRWCAVQIISITLKMSERATVNFTKDADKASTTVNFTMDAEKALECFLRWEEFCQD 356
DI+WC +QI+ L MS++A NF + AE+A C LRWEEFCQD
Sbjct: 222 ---DIKWCGIQILCTILGMSDKAVENFG-------------VGAEEATLCLLRWEEFCQD 265
Query: 357 VYLEKAGWYLGANVLEMGTYVDRDLVFNQENCLKSFDFRPSNVSLSLTNGSKTLRKNRRH 536
V +EK +G++ + F Q+N LKS +++ S + + + K+RR
Sbjct: 266 VAIEKFCLCVGSSEQTNFGSFTGGIKFGQQNFLKSCGL--NSLISSHCHQIEPVIKSRRV 323
Query: 537 ISRNANLSSLECSFVLTSAVRKNFEMVLMAVSQKWPVLLYGPTGAGKTALISYLARVSGN 716
++ + S FV+TS + K FEMVL+AVSQKWPVLLYGP GAGKTALI+ LA+ +GN
Sbjct: 324 VTWDER--STAYPFVVTSMMSKGFEMVLLAVSQKWPVLLYGPPGAGKTALINKLAQDAGN 381
Query: 717 RVLSIHMDEQMDGKTLIGAYVCTERPGEFRWQPGSLTQAILNGFWVVFEDIDKAPSDVQS 896
+VLSIHMD+Q+DGKTLIG+YVCTE+PGEFRWQPGSL QA+LNG+WVVFEDIDKAPSDVQS
Sbjct: 382 QVLSIHMDDQIDGKTLIGSYVCTEQPGEFRWQPGSLIQAVLNGYWVVFEDIDKAPSDVQS 441
Query: 897 ILLPLLEGTHSYVAGSG 947
ILLPLLEG +++ G
Sbjct: 442 ILLPLLEGEIAFITSHG 458
Score = 87.8 bits (216), Expect = 3e-15
Identities = 47/128 (36%), Positives = 81/128 (63%), Gaps = 1/128 (0%)
Frame = +3
Query: 537 ISRNANLSSLECSFVLTSAVRKNFEMVLMAVS-QKWPVLLYGPTGAGKTALISYLARVSG 713
I++ + L ++VLT +V+K E + AV +++PVLL GPT +GKT+L+ YLA +G
Sbjct: 1041 ITKISGFDDLYKNYVLTKSVKKQLENLARAVFIKRYPVLLQGPTSSGKTSLVQYLAARTG 1100
Query: 714 NRVLSIHMDEQMDGKTLIGAYVCTERPGEFRWQPGSLTQAILNGFWVVFEDIDKAPSDVQ 893
+ + I+ E D + +G+Y+ ++ G+ +Q G L +A+ NG W+V ++++ APSDV
Sbjct: 1101 HEFVRINNHEHTDLQEYLGSYI-SDAQGKLVFQEGILVKAVRNGHWIVLDELNLAPSDVL 1159
Query: 894 SILLPLLE 917
L LL+
Sbjct: 1160 EALNRLLD 1167
Score = 70.5 bits (171), Expect = 6e-10
Identities = 43/110 (39%), Positives = 63/110 (57%), Gaps = 3/110 (2%)
Frame = +3
Query: 582 LTSAVRKNFEMVLMAVSQKWPVLLYGPTGAGKTALISYLARVSGNRVLSIHMDEQMDGKT 761
LT R+N VL A+ PVLL G G GKT+LI L + SG++V+ I++ EQ D
Sbjct: 1730 LTPTTRRNALRVLRAMQLPKPVLLEGSPGVGKTSLIIALGKYSGHKVVRINLSEQTDLMD 1789
Query: 762 LIGAYVCTERPG--EFRWQPGSLTQAILNGFWVVFEDIDKAP-SDVQSIL 902
L+G + E +F W G L QA+ G WV+ ++++ AP S + +IL
Sbjct: 1790 LLGTDLPVESDEGMKFAWSDGILLQALKEGCWVLLDELNLAPQSGLNAIL 1839