BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017821
         (799 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309447.1| predicted protein [Populus trichocarpa] gi|1...   150   4e-34
ref|XP_002516178.1| RING-H2 finger protein ATL3J, putative [Rici...   141   1e-31
ref|XP_002874020.1| zinc finger family protein [Arabidopsis lyra...   137   3e-30
ref|NP_568404.1| RING/U-box domain-containing protein [Arabidops...   134   2e-29
ref|NP_001146854.1| RING zinc finger protein-like [Zea mays] gi|...   130   3e-28

>ref|XP_002309447.1| predicted protein [Populus trichocarpa] gi|118483893|gb|ABK93837.1|
           unknown [Populus trichocarpa]
           gi|222855423|gb|EEE92970.1| predicted protein [Populus
           trichocarpa]
          Length = 168

 Score =  150 bits (378), Expect = 4e-34
 Identities = 83/178 (46%), Positives = 99/178 (55%), Gaps = 9/178 (5%)
 Frame = +2

Query: 107 MGFSVEYSGLVLTHXXXXXXXXXXXXRCVFCWVTRSMG----FXXXXXXXXXXXTVPQVG 274
           MGF VE SGL++TH            R    W  R                    VP   
Sbjct: 1   MGFFVEESGLIVTHLLYKAALVLAVLRWALAWALRFKNRTHLASPSNDSLRRSHPVP--- 57

Query: 275 LNSGLTAQMIRETLDVVTYGDIMHNLPGTCDTCAVCLNELKKNDRVRELRNCCHVFHIKC 454
                ++Q IR+ L + T+GD+   +PG CDTCAVCL++L+  D VRELRNCCHVFH  C
Sbjct: 58  -----SSQQIRDGLILTTFGDVTERMPGVCDTCAVCLSQLRDQDEVRELRNCCHVFHRDC 112

Query: 455 IDRWLDHG-----DQKNCPLCRAPLLVTSCGSSLDGGWARSEPSWAVERLLYLFGDDL 613
           IDRW+DH      +   CPLCRAPLL TS   SL     R+EPSWAVER+LYLFGDDL
Sbjct: 113 IDRWVDHDHEHDENHNTCPLCRAPLLTTS--QSL--ARTRAEPSWAVERILYLFGDDL 166


>ref|XP_002516178.1| RING-H2 finger protein ATL3J, putative [Ricinus communis]
           gi|223544664|gb|EEF46180.1| RING-H2 finger protein
           ATL3J, putative [Ricinus communis]
          Length = 177

 Score =  141 bits (356), Expect = 1e-31
 Identities = 81/180 (45%), Positives = 99/180 (55%), Gaps = 11/180 (6%)
 Frame = +2

Query: 107 MGFSVEYSGLVLTHXXXXXXXXXXXXRCVFCWVTRSMGFXXXXXXXXXXXTVPQVGLNSG 286
           MGF VE S +++TH            R    W  R   F           +     L+  
Sbjct: 1   MGFFVEDSDVIVTHLLYKAAVILAVARWALSWALR---FRSRTYLSPSSSSSSNDSLHQS 57

Query: 287 L---TAQMIRETLDVVTYGDIMHNLPGTCDTCAVCLNELKKNDRVRELRNCCHVFHIKCI 457
               ++Q IR+ L + T+GDI   + G CDTCAVCL +L + D VRELRNCCHVFH +CI
Sbjct: 58  CALPSSQQIRDGLILTTFGDITDRISGACDTCAVCLGQLSELDEVRELRNCCHVFHKECI 117

Query: 458 DRWLDH-----GDQKNCPLCRAPLLVTSCGSSLDGGWA---RSEPSWAVERLLYLFGDDL 613
           DRW+DH      + K CPLCRAPLL  S   SL   W    + EPSWAVER+LYLFGDDL
Sbjct: 118 DRWVDHDHDHDDNHKTCPLCRAPLLTAS--QSL--AWINNNKCEPSWAVERILYLFGDDL 173


>ref|XP_002874020.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297319857|gb|EFH50279.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 178

 Score =  137 bits (345), Expect = 3e-30
 Identities = 80/188 (42%), Positives = 99/188 (52%), Gaps = 18/188 (9%)
 Frame = +2

Query: 107 MGFSVEYSGLVLTHXXXXXXXXXXXXRCVFCWVTRSMGFXXXXXXXXXXXTVPQVGLNSG 286
           M F +E+SGL++T             R +  W+ R                 P +     
Sbjct: 1   MSFFIEHSGLIVTQLLYKMAVLITILRWILAWILRYRSRSRSTSSSSSPSVSPSI----- 55

Query: 287 LTAQMIRETLDVVTYGDIMHNLPGTC-DTCAVCLNELKKNDRVRELRNCCHVFHIKCIDR 463
            ++Q I+E+L V T+ D     P    DTCAVCL +L+  D VRELRNC H+FH +CIDR
Sbjct: 56  -SSQTIKESLSVTTFRDAAERSPAMINDTCAVCLGDLEDGDEVRELRNCSHMFHRECIDR 114

Query: 464 WLDH----GDQKN---------CPLCRAPLL---VTSCGSSLDGGW-ARSEPSWAVERLL 592
           WLD+    GD  N         CPLCR PLL    TSCG      W A++EPSWAVERLL
Sbjct: 115 WLDYECCGGDDNNEAEEDNHRTCPLCRTPLLAANTTSCGD-----WPAKNEPSWAVERLL 169

Query: 593 YLFGDDLH 616
           YLFGDDLH
Sbjct: 170 YLFGDDLH 177


>ref|NP_568404.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
           gi|16209696|gb|AAL14405.1| AT5g20880/F22D1_50
           [Arabidopsis thaliana] gi|23463037|gb|AAN33188.1|
           At5g20880/F22D1_50 [Arabidopsis thaliana]
           gi|26451529|dbj|BAC42862.1| unknown protein [Arabidopsis
           thaliana] gi|332005517|gb|AED92900.1| RING/U-box
           domain-containing protein [Arabidopsis thaliana]
          Length = 176

 Score =  134 bits (337), Expect = 2e-29
 Identities = 79/188 (42%), Positives = 98/188 (52%), Gaps = 18/188 (9%)
 Frame = +2

Query: 107 MGFSVEYSGLVLTHXXXXXXXXXXXXRCVFCWVTRSMGFXXXXXXXXXXXTVPQVGLNSG 286
           M F +E SGL++T             R +  W+ R               T         
Sbjct: 1   MSFFIEDSGLIVTQLLYKMAVLITVLRWILAWILRYRS--------RSRSTSSSTSACPS 52

Query: 287 LTAQMIRETLDVVTYGDIMHNLPGTC-DTCAVCLNELKKNDRVRELRNCCHVFHIKCIDR 463
           +++Q I+E+L V T+ D     P    DTCAVCL +L+  D VRELRNC H+FH +CIDR
Sbjct: 53  ISSQAIKESLSVTTFRDAAERSPAMINDTCAVCLGDLEDGDEVRELRNCSHMFHRECIDR 112

Query: 464 WLDH----GDQKN---------CPLCRAPLL---VTSCGSSLDGGW-ARSEPSWAVERLL 592
           WLD+    GD+ N         CPLCR PLL    TSCG      W  ++EPSWAVERLL
Sbjct: 113 WLDYECCGGDENNEGEEDNHRTCPLCRTPLLAANTTSCGD-----WPTKNEPSWAVERLL 167

Query: 593 YLFGDDLH 616
           YLFGDDLH
Sbjct: 168 YLFGDDLH 175


>ref|NP_001146854.1| RING zinc finger protein-like [Zea mays]
           gi|195604260|gb|ACG23960.1| RING zinc finger
           protein-like [Zea mays]
          Length = 173

 Score =  130 bits (328), Expect = 3e-28
 Identities = 78/183 (42%), Positives = 99/183 (54%), Gaps = 14/183 (7%)
 Frame = +2

Query: 107 MGFSVEYSGLVLTHXXXXXXXXXXXXRCVFCWVTRSMGFXXXXXXXXXXXTVPQVGLNSG 286
           M F +E SGL++T             R +F W+ R   +           T P       
Sbjct: 1   MSFFIEDSGLIVTQLLYQMAVLITLLRWIFTWILR---YRSRSTSSSSSSTPP------- 50

Query: 287 LTAQMIRETLDVVTYGDIMHNLPGTC-DTCAVCLNELKKNDRVRELRNCCHVFHIKCIDR 463
           +++Q I+E+L V T+ D     P    DTCAVCL +L+  D VRELRNC HVFH +CIDR
Sbjct: 51  ISSQTIKESLAVTTFRDAADRSPELISDTCAVCLGDLEDGDEVRELRNCSHVFHRECIDR 110

Query: 464 WLDH---------GDQKN---CPLCRAPLLVTSCGSSLDGGW-ARSEPSWAVERLLYLFG 604
           WLD+         G++ N   CPLCR PLL  +  S  D  W  ++EPSWAVERLLYLFG
Sbjct: 111 WLDYECCGGDDNDGEEDNHRTCPLCRTPLLAANTSSCAD--WPVKNEPSWAVERLLYLFG 168

Query: 605 DDL 613
           DDL
Sbjct: 169 DDL 171